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The map label for this gene is 116689089

Identifier: 116689089

GI number: 116689089

Start: 1180513

End: 1181691

Strand: Direct

Name: 116689089

Synonym: Bcen2424_1066

Alternate gene names: NA

Gene position: 1180513-1181691 (Clockwise)

Preceding gene: 116689088

Following gene: 116689092

Centisome position: 33.88

GC content: 67.68

Gene sequence:

>1179_bases
ATGGGTGGGCACATGGACGATCGGTCCGACAACGAATTTCCGATAGCGCCGCCCGTGCCCCGCAAGGGGCGCGGTGCGGT
CGATAACCTGCAGGGGCGGTATGAGCTCGCGCAGCGCGAAGCCGTGGACGACGGCTGGACGCACGCGTCCGATGACGCCG
ATTTCCCCGCGCCGCTGCGCACGCAGGTATTCGAGGAGCGGGCGAAGAGCATCCTGACGCGTAACCAGTCGCCCGATATT
CCGTTCAGCGTGTCGCTCAATCCGTATCGCGGCTGCGAGCACGGTTGTATCTACTGCTTCGCGCGGCCGACGCACAGCTA
CCTCGGGCTGTCGCCGGGGCTCGATTTCGAAAGCCGCATCTACGCGAAGGTGAACGCGGCCGAACTGCTCGAGCGCGAGA
TTTCGCGCAAGCGCTACGTGCCGGAGCCGATCGCGCTCGGCGTCAATACCGACGCGTACCAGCCGGTCGAGCGCGACCTG
CGCATCACGCGCAGCGTGATCCAGGTGATGCACGATCGCGGGCTGCCGTTCGCGGCGATCACGAAGTCGTCGCTGATCGA
GCGCGATCTCGACCTGCTCGCGCCGATGGCCGAACGCGGGCAGGTGATGGCGGCGGTCACGATCACGACGCTTGATGCCG
AGCTCGCGCGCACGCTCGAGCCGCGCGCGGCCACCCCGGCGCGGCGGTTGCGCACGATCCGCGCGCTGCGCGATGCGGGC
GTGCCGGTCGGCGTGAGCATCGCACCGGTGATCCCGTTCGTGACCGAGCCCGACATGGAGCGCGTGCTGGAGGCCTGCGC
GGAAGCCGGCGCGACGCATGCGAGCTACATCATCCTGAGGTTGCCGTGGGAGGTTGCGCCGCTGTTCAAGCAGTGGCTTG
CCGCGCATTTTCCCGATCGTGCGGAGCGCGTGATGAACCGCGTGCGCGACATGCGCGGCGGCAAGGATTACGACTCGGAT
TTCTCGAAACGGATGAAGGGGGAGGGGATCTGGGCCGACCTGTTGCGGCAGCGCTTCCGTCAGGCGGTCAAGCGGCTCGG
GTTGAACGAACGCACGAACGGCATTCTCGATCTGTCGCGGTTCAGCGGTGCGCCGGCCGCTGCGGTGCCGGCGCCGCGTG
TCGCGGTTCGTGCAGCCGGCGCGAAGTCGCGCGACGACATGCAGTTGAACCTGTTCTGA

Upstream 100 bases:

>100_bases
CGGCGAGTGACGCGCCCGCGGCTCGTCGTCGGGCCCTTTATGCCGCCCTTGGCATGCTGCACCCAATACTGTATAAATGT
ACAGTATTGGGTGCAGGCGA

Downstream 100 bases:

>100_bases
CCGGCAGGCAACGCAGTTGCCGGCGAGCCGTATCGACCGTATTGGTCGTGCTTACTGCGAAATCTGCTTGGCTGCTTCGA
CCTGCGATTCGAAGTATGTC

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MGGHMDDRSDNEFPIAPPVPRKGRGAVDNLQGRYELAQREAVDDGWTHASDDADFPAPLRTQVFEERAKSILTRNQSPDI
PFSVSLNPYRGCEHGCIYCFARPTHSYLGLSPGLDFESRIYAKVNAAELLEREISRKRYVPEPIALGVNTDAYQPVERDL
RITRSVIQVMHDRGLPFAAITKSSLIERDLDLLAPMAERGQVMAAVTITTLDAELARTLEPRAATPARRLRTIRALRDAG
VPVGVSIAPVIPFVTEPDMERVLEACAEAGATHASYIILRLPWEVAPLFKQWLAAHFPDRAERVMNRVRDMRGGKDYDSD
FSKRMKGEGIWADLLRQRFRQAVKRLGLNERTNGILDLSRFSGAPAAAVPAPRVAVRAAGAKSRDDMQLNLF

Sequences:

>Translated_392_residues
MGGHMDDRSDNEFPIAPPVPRKGRGAVDNLQGRYELAQREAVDDGWTHASDDADFPAPLRTQVFEERAKSILTRNQSPDI
PFSVSLNPYRGCEHGCIYCFARPTHSYLGLSPGLDFESRIYAKVNAAELLEREISRKRYVPEPIALGVNTDAYQPVERDL
RITRSVIQVMHDRGLPFAAITKSSLIERDLDLLAPMAERGQVMAAVTITTLDAELARTLEPRAATPARRLRTIRALRDAG
VPVGVSIAPVIPFVTEPDMERVLEACAEAGATHASYIILRLPWEVAPLFKQWLAAHFPDRAERVMNRVRDMRGGKDYDSD
FSKRMKGEGIWADLLRQRFRQAVKRLGLNERTNGILDLSRFSGAPAAAVPAPRVAVRAAGAKSRDDMQLNLF
>Mature_391_residues
GGHMDDRSDNEFPIAPPVPRKGRGAVDNLQGRYELAQREAVDDGWTHASDDADFPAPLRTQVFEERAKSILTRNQSPDIP
FSVSLNPYRGCEHGCIYCFARPTHSYLGLSPGLDFESRIYAKVNAAELLEREISRKRYVPEPIALGVNTDAYQPVERDLR
ITRSVIQVMHDRGLPFAAITKSSLIERDLDLLAPMAERGQVMAAVTITTLDAELARTLEPRAATPARRLRTIRALRDAGV
PVGVSIAPVIPFVTEPDMERVLEACAEAGATHASYIILRLPWEVAPLFKQWLAAHFPDRAERVMNRVRDMRGGKDYDSDF
SKRMKGEGIWADLLRQRFRQAVKRLGLNERTNGILDLSRFSGAPAAAVPAPRVAVRAAGAKSRDDMQLNLF

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 43678; Mature: 43547

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: PS00133 CARBOXYPEPT_ZN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGHMDDRSDNEFPIAPPVPRKGRGAVDNLQGRYELAQREAVDDGWTHASDDADFPAPLR
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH
TQVFEERAKSILTRNQSPDIPFSVSLNPYRGCEHGCIYCFARPTHSYLGLSPGLDFESRI
HHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEEEECCCHHHCCCCCCCCHHHHH
YAKVNAAELLEREISRKRYVPEPIALGVNTDAYQPVERDLRITRSVIQVMHDRGLPFAAI
HHCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHH
TKSSLIERDLDLLAPMAERGQVMAAVTITTLDAELARTLEPRAATPARRLRTIRALRDAG
HHHHHHHHHHHHHCCHHHCCCEEEEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
VPVGVSIAPVIPFVTEPDMERVLEACAEAGATHASYIILRLPWEVAPLFKQWLAAHFPDR
CCCCCCHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCHH
AERVMNRVRDMRGGKDYDSDFSKRMKGEGIWADLLRQRFRQAVKRLGLNERTNGILDLSR
HHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHH
FSGAPAAAVPAPRVAVRAAGAKSRDDMQLNLF
HCCCCCCCCCCCHHHEEECCCCCCCCCEEECC
>Mature Secondary Structure 
GGHMDDRSDNEFPIAPPVPRKGRGAVDNLQGRYELAQREAVDDGWTHASDDADFPAPLR
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH
TQVFEERAKSILTRNQSPDIPFSVSLNPYRGCEHGCIYCFARPTHSYLGLSPGLDFESRI
HHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEEEECCCHHHCCCCCCCCHHHHH
YAKVNAAELLEREISRKRYVPEPIALGVNTDAYQPVERDLRITRSVIQVMHDRGLPFAAI
HHCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHH
TKSSLIERDLDLLAPMAERGQVMAAVTITTLDAELARTLEPRAATPARRLRTIRALRDAG
HHHHHHHHHHHHHCCHHHCCCEEEEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
VPVGVSIAPVIPFVTEPDMERVLEACAEAGATHASYIILRLPWEVAPLFKQWLAAHFPDR
CCCCCCHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCHH
AERVMNRVRDMRGGKDYDSDFSKRMKGEGIWADLLRQRFRQAVKRLGLNERTNGILDLSR
HHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHH
FSGAPAAAVPAPRVAVRAAGAKSRDDMQLNLF
HCCCCCCCCCCCHHHEEECCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]