Click here to switch to the map view.

The map label for this gene is etfB [H]

Identifier: 116689085

GI number: 116689085

Start: 1176476

End: 1177225

Strand: Direct

Name: etfB [H]

Synonym: Bcen2424_1062

Alternate gene names: 116689085

Gene position: 1176476-1177225 (Clockwise)

Preceding gene: 116689084

Following gene: 116689086

Centisome position: 33.77

GC content: 63.73

Gene sequence:

>750_bases
ATGAAAATCCTGGTGCCAGTGAAAAGAGTGGTCGATTACAACGTGAAGGTCCGCGTGAAGTCGGACAACACGGGCGTCGA
CATCGCGAACGTGAAGATGTCGATGAACCCGTTCGACGAAATCGCCGTTGAAGAAGCGGTGCGCCTCAAGGAAGCAGGCG
TCGCGACCGAAGTGATCGCGGTGTCGGTGGGCGTCACGCAAGCGCAGGAAACGCTGCGCACGGCGCTTGCGATCGGCGCG
GATCGTGCGATCCTCGTCGAGTCGAACGACAGCGTCGAGCCGCTGGCCGTCGCGAAGATCCTGAAAGCGCTGGTCGACAA
GGAACAGCCGCAGCTGGTGATCCTCGGCAAGCAGGCGATCGACGACGATTCGAACCAGACGGGCCAGATGCTGGCCGCGC
TGGCAGGCCTGCCGCAAGCGACGTTCGCGTCGAAGGTGACGGTGGCCGACGGCAAGGCAACGGTGGCACGCGAAGTCGAC
GGCGGCGCGGAAACGCTGTCGCTGACGCTGCCGGCGGTCGTGACGACCGACCTGCGCCTGAACGAGCCGCGCTACGTGAC
GCTGCCGAACATCATGAAGGCGAAGAAGAAGCCGCTGGAAACCGTGAAGCCGGAAGACCTCGGTGTGGACGTCGCACCGC
GTCTGAAGACGCTGAAGGTGGTCGAGCCGCCGAAGCGCGCAGCCGGCGTGAAGGTGCCGGACGTGAAGACGCTGGTCGAG
AAGCTGAAGACCGAAGCCAAGGTGCTGTAA

Upstream 100 bases:

>100_bases
ATCCTCGACAACCATCATGGTTGGGTCCGCCTGGCCGCGCAGTCATGAGGCCTCGCTATAAAATGGCCTCTGGTCGTATT
CGTAACTTTGGAGCGTGTGC

Downstream 100 bases:

>100_bases
GAGGGAGCGGAAAGAAATGACGATTCTGGTGATTGCAGAACACGACAACGCGTCGATCAAGGCCGCGACGTTGAACACGG
TGGCGGCGGCCGCGAAGATC

Product: electron transfer flavoprotein beta-subunit

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKILVPVKRVVDYNVKVRVKSDNTGVDIANVKMSMNPFDEIAVEEAVRLKEAGVATEVIAVSVGVTQAQETLRTALAIGA
DRAILVESNDSVEPLAVAKILKALVDKEQPQLVILGKQAIDDDSNQTGQMLAALAGLPQATFASKVTVADGKATVAREVD
GGAETLSLTLPAVVTTDLRLNEPRYVTLPNIMKAKKKPLETVKPEDLGVDVAPRLKTLKVVEPPKRAAGVKVPDVKTLVE
KLKTEAKVL

Sequences:

>Translated_249_residues
MKILVPVKRVVDYNVKVRVKSDNTGVDIANVKMSMNPFDEIAVEEAVRLKEAGVATEVIAVSVGVTQAQETLRTALAIGA
DRAILVESNDSVEPLAVAKILKALVDKEQPQLVILGKQAIDDDSNQTGQMLAALAGLPQATFASKVTVADGKATVAREVD
GGAETLSLTLPAVVTTDLRLNEPRYVTLPNIMKAKKKPLETVKPEDLGVDVAPRLKTLKVVEPPKRAAGVKVPDVKTLVE
KLKTEAKVL
>Mature_249_residues
MKILVPVKRVVDYNVKVRVKSDNTGVDIANVKMSMNPFDEIAVEEAVRLKEAGVATEVIAVSVGVTQAQETLRTALAIGA
DRAILVESNDSVEPLAVAKILKALVDKEQPQLVILGKQAIDDDSNQTGQMLAALAGLPQATFASKVTVADGKATVAREVD
GGAETLSLTLPAVVTTDLRLNEPRYVTLPNIMKAKKKPLETVKPEDLGVDVAPRLKTLKVVEPPKRAAGVKVPDVKTLVE
KLKTEAKVL

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=252, Percent_Identity=60.7142857142857, Blast_Score=288, Evalue=3e-78,
Organism=Homo sapiens, GI62420877, Length=237, Percent_Identity=60.337552742616, Blast_Score=266, Evalue=1e-71,
Organism=Escherichia coli, GI87081682, Length=233, Percent_Identity=28.3261802575107, Blast_Score=68, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI25141345, Length=253, Percent_Identity=56.5217391304348, Blast_Score=259, Evalue=1e-69,
Organism=Saccharomyces cerevisiae, GI6321646, Length=253, Percent_Identity=50.9881422924901, Blast_Score=240, Evalue=2e-64,
Organism=Drosophila melanogaster, GI24651147, Length=246, Percent_Identity=59.349593495935, Blast_Score=259, Evalue=1e-69,
Organism=Drosophila melanogaster, GI24651145, Length=246, Percent_Identity=59.349593495935, Blast_Score=259, Evalue=1e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 26569; Mature: 26569

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVPVKRVVDYNVKVRVKSDNTGVDIANVKMSMNPFDEIAVEEAVRLKEAGVATEVIA
CEEEEECHHHHCCCEEEEEECCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEE
VSVGVTQAQETLRTALAIGADRAILVESNDSVEPLAVAKILKALVDKEQPQLVILGKQAI
EECCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHC
DDDSNQTGQMLAALAGLPQATFASKVTVADGKATVAREVDGGAETLSLTLPAVVTTDLRL
CCCCCHHHHHHHHHHCCCCHHHHCEEEEECCCEEEEEECCCCCEEEEEEECEEEEECEEE
NEPRYVTLPNIMKAKKKPLETVKPEDLGVDVAPRLKTLKVVEPPKRAAGVKVPDVKTLVE
CCCCEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCCCHHHHHH
KLKTEAKVL
HHHHHHCCC
>Mature Secondary Structure
MKILVPVKRVVDYNVKVRVKSDNTGVDIANVKMSMNPFDEIAVEEAVRLKEAGVATEVIA
CEEEEECHHHHCCCEEEEEECCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEE
VSVGVTQAQETLRTALAIGADRAILVESNDSVEPLAVAKILKALVDKEQPQLVILGKQAI
EECCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHC
DDDSNQTGQMLAALAGLPQATFASKVTVADGKATVAREVDGGAETLSLTLPAVVTTDLRL
CCCCCHHHHHHHHHHCCCCHHHHCEEEEECCCEEEEEECCCCCEEEEEEECEEEEECEEE
NEPRYVTLPNIMKAKKKPLETVKPEDLGVDVAPRLKTLKVVEPPKRAAGVKVPDVKTLVE
CCCCEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCCCHHHHHH
KLKTEAKVL
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]