| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is udg [H]
Identifier: 116689074
GI number: 116689074
Start: 1165247
End: 1166647
Strand: Direct
Name: udg [H]
Synonym: Bcen2424_1051
Alternate gene names: 116689074
Gene position: 1165247-1166647 (Clockwise)
Preceding gene: 116689073
Following gene: 116689075
Centisome position: 33.45
GC content: 66.88
Gene sequence:
>1401_bases ATGAAAATCACCATCATCGGCACCGGCTATGTCGGCCTCGTCACGGGCGCCTGCCTCGCGGAGATCGGTCACGACGTCTT CTGTCTCGATGTCGATCCGCGCAAGATCGACATCCTGAACAACGGCGGGATGCCGATTCACGAACCGGGGCTGCTGGACA TCATCGCGCGCAACCGCACGGCGGGGCGCCTGCGTTTCTCGACCGACATCGAGGCGAGCGTCGCGCATGGCGAGATCCAG TTCATCGCCGTCGGCACGCCGCCTGACGAGGACGGCTCGGCCGACCTGCAATACGTGCTCGAGGCCGCGCGCAACATCGG CCGCCACATGACGGGCTTCAAGGTGATCGTCGACAAGTCGACGGTGCCGGTCGGCACCGCGCGGCGCGTGCACGGCGTGG TCGACGAGGCGCTTGCCGCACGCGGGCTCGCGGGCAGCGTCGCGCATCGCTTCTCGGTCGTGTCGAACCCGGAATTCCTG AAGGAAGGCGCGGCGGTCGAGGACTTCATGCGCCCGGACCGGATCATCATCGGTGTCGACGACGACGAAACCGGCACGAT CGCGCGCGAGAAGATGAAGAAGCTCTACGCGCCGTTCAACCGCAACCACGAACGCACGATCTACATGGACGTGCGTTCGG CGGAATTCGCGAAGTATGCGGCGAACGCGATGCTCGCGACGCGCATCTCGTTCATGAACGAGATGTCGAATCTCGCCGAC AAGGTCGGCGCCGACATCGAGGCCGTGCGCCGCGGGATCGGCTCCGATCCGCGCATCGGCTATCACTTCCTGTATGCCGG CGTCGGCTACGGCGGCTCGTGCTTCCCGAAGGACGTGCAGGCGCTGATCCGCACCGCCGGCGAGAACGGCCAGCCGCTGC GTATCCTGGAGGCTGTCGAGGCCGCCAACCATGCGCAGAAGGACGTGCTGATCGGCAAGATCGAGCAGCGCTTCGGCGCC GACCTGACGGGCCGCGAGTTCGCGGTCTGGGGCCTCGCGTTCAAGCCGAACACCGACGACATGCGCGAGGCGCCGAGCCG CCGCCTGATCGCCGCGCTGCTCGAACGCGGTGCGACCGTGCGCGCCTACGATCCGGTCGCCATCGACGAAGCGCGGCGCG TGTTCGCGCTGGATTTCGGCGACGATGCGAAGGCGCTGGCGCGGCTGCATCTCGTCGACACGCAGGACGCCGCGGTCACG GGCGCGGACGCCCTCGTGATCGTCACCGAATGGAAGGAATTCCGCAGCCCCGATTTCACGCGCCTGAAGGCCGAGCTGAA GGCGCCGGTGATCTTCGACGGGCGCAACCTGTACGAGCCGGATGCGATGGCCGAGCTGGGCATCGACTATTACGCGATTG GCCGGCCGTATGTCGATCCCCAGTCGTCCTCCCGTGGCTGA
Upstream 100 bases:
>100_bases GCCGGGCTGATCCCGGCACGCGGAGCCAACGCGCTGCGGTTGCCGCCGGGCTCGTCCCGGCGGCCAAGTTAGTCAATTAC CGGGAAGTACCGGAACATCT
Downstream 100 bases:
>100_bases ACGTACGATGAATACTCTTCGCGAAGTCGTTCCGGTGCCGCGCGAGCAACTCGCGCGCTCGCGTGTGCTCGTCGTCGGCG ACGTGATGCTCGACCGTTAC
Product: UDP-glucose 6-dehydrogenase
Products: NA
Alternate protein names: UDP-Glc dehydrogenase; UDP-GlcDH; UDPGDH [H]
Number of amino acids: Translated: 466; Mature: 466
Protein sequence:
>466_residues MKITIIGTGYVGLVTGACLAEIGHDVFCLDVDPRKIDILNNGGMPIHEPGLLDIIARNRTAGRLRFSTDIEASVAHGEIQ FIAVGTPPDEDGSADLQYVLEAARNIGRHMTGFKVIVDKSTVPVGTARRVHGVVDEALAARGLAGSVAHRFSVVSNPEFL KEGAAVEDFMRPDRIIIGVDDDETGTIAREKMKKLYAPFNRNHERTIYMDVRSAEFAKYAANAMLATRISFMNEMSNLAD KVGADIEAVRRGIGSDPRIGYHFLYAGVGYGGSCFPKDVQALIRTAGENGQPLRILEAVEAANHAQKDVLIGKIEQRFGA DLTGREFAVWGLAFKPNTDDMREAPSRRLIAALLERGATVRAYDPVAIDEARRVFALDFGDDAKALARLHLVDTQDAAVT GADALVIVTEWKEFRSPDFTRLKAELKAPVIFDGRNLYEPDAMAELGIDYYAIGRPYVDPQSSSRG
Sequences:
>Translated_466_residues MKITIIGTGYVGLVTGACLAEIGHDVFCLDVDPRKIDILNNGGMPIHEPGLLDIIARNRTAGRLRFSTDIEASVAHGEIQ FIAVGTPPDEDGSADLQYVLEAARNIGRHMTGFKVIVDKSTVPVGTARRVHGVVDEALAARGLAGSVAHRFSVVSNPEFL KEGAAVEDFMRPDRIIIGVDDDETGTIAREKMKKLYAPFNRNHERTIYMDVRSAEFAKYAANAMLATRISFMNEMSNLAD KVGADIEAVRRGIGSDPRIGYHFLYAGVGYGGSCFPKDVQALIRTAGENGQPLRILEAVEAANHAQKDVLIGKIEQRFGA DLTGREFAVWGLAFKPNTDDMREAPSRRLIAALLERGATVRAYDPVAIDEARRVFALDFGDDAKALARLHLVDTQDAAVT GADALVIVTEWKEFRSPDFTRLKAELKAPVIFDGRNLYEPDAMAELGIDYYAIGRPYVDPQSSSRG >Mature_466_residues MKITIIGTGYVGLVTGACLAEIGHDVFCLDVDPRKIDILNNGGMPIHEPGLLDIIARNRTAGRLRFSTDIEASVAHGEIQ FIAVGTPPDEDGSADLQYVLEAARNIGRHMTGFKVIVDKSTVPVGTARRVHGVVDEALAARGLAGSVAHRFSVVSNPEFL KEGAAVEDFMRPDRIIIGVDDDETGTIAREKMKKLYAPFNRNHERTIYMDVRSAEFAKYAANAMLATRISFMNEMSNLAD KVGADIEAVRRGIGSDPRIGYHFLYAGVGYGGSCFPKDVQALIRTAGENGQPLRILEAVEAANHAQKDVLIGKIEQRFGA DLTGREFAVWGLAFKPNTDDMREAPSRRLIAALLERGATVRAYDPVAIDEARRVFALDFGDDAKALARLHLVDTQDAAVT GADALVIVTEWKEFRSPDFTRLKAELKAPVIFDGRNLYEPDAMAELGIDYYAIGRPYVDPQSSSRG
Specific function: Unknown
COG id: COG1004
COG function: function code M; Predicted UDP-glucose 6-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4507813, Length=471, Percent_Identity=34.1825902335456, Blast_Score=241, Evalue=8e-64, Organism=Homo sapiens, GI296040438, Length=373, Percent_Identity=34.3163538873995, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI296040443, Length=315, Percent_Identity=35.5555555555556, Blast_Score=170, Evalue=2e-42, Organism=Escherichia coli, GI1788340, Length=375, Percent_Identity=28, Blast_Score=149, Evalue=4e-37, Organism=Escherichia coli, GI48994968, Length=424, Percent_Identity=25.4716981132075, Blast_Score=126, Evalue=3e-30, Organism=Caenorhabditis elegans, GI17560350, Length=470, Percent_Identity=35.531914893617, Blast_Score=254, Evalue=1e-67, Organism=Drosophila melanogaster, GI17136908, Length=472, Percent_Identity=35.3813559322034, Blast_Score=254, Evalue=1e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR021157 - InterPro: IPR016040 - InterPro: IPR017476 - InterPro: IPR014027 - InterPro: IPR014026 - InterPro: IPR014028 - InterPro: IPR001732 [H]
Pfam domain/function: PF00984 UDPG_MGDP_dh; PF03720 UDPG_MGDP_dh_C; PF03721 UDPG_MGDP_dh_N [H]
EC number: =1.1.1.22 [H]
Molecular weight: Translated: 50848; Mature: 50848
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITIIGTGYVGLVTGACLAEIGHDVFCLDVDPRKIDILNNGGMPIHEPGLLDIIARNRT CEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCCCCCCEEEEECCCC AGRLRFSTDIEASVAHGEIQFIAVGTPPDEDGSADLQYVLEAARNIGRHMTGFKVIVDKS CCEEEEECCCCEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECC TVPVGTARRVHGVVDEALAARGLAGSVAHRFSVVSNPEFLKEGAAVEDFMRPDRIIIGVD CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHCCCCHHHHCCCCEEEEECC DDETGTIAREKMKKLYAPFNRNHERTIYMDVRSAEFAKYAANAMLATRISFMNEMSNLAD CCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH KVGADIEAVRRGIGSDPRIGYHFLYAGVGYGGSCFPKDVQALIRTAGENGQPLRILEAVE HHCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHH AANHAQKDVLIGKIEQRFGADLTGREFAVWGLAFKPNTDDMREAPSRRLIAALLERGATV HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHCCHHHHHHHHHHCCCEE RAYDPVAIDEARRVFALDFGDDAKALARLHLVDTQDAAVTGADALVIVTEWKEFRSPDFT EEECCCCCCCCCEEEEEECCCCHHHHHEEEEECCCCCEEECCCEEEEEECHHHHCCCCHH RLKAELKAPVIFDGRNLYEPDAMAELGIDYYAIGRPYVDPQSSSRG HHHHHHCCCEEECCCCCCCCHHHHHHCCCEEECCCCCCCCCCCCCC >Mature Secondary Structure MKITIIGTGYVGLVTGACLAEIGHDVFCLDVDPRKIDILNNGGMPIHEPGLLDIIARNRT CEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCCCCCCEEEEECCCC AGRLRFSTDIEASVAHGEIQFIAVGTPPDEDGSADLQYVLEAARNIGRHMTGFKVIVDKS CCEEEEECCCCEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECC TVPVGTARRVHGVVDEALAARGLAGSVAHRFSVVSNPEFLKEGAAVEDFMRPDRIIIGVD CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHCCCCHHHHCCCCEEEEECC DDETGTIAREKMKKLYAPFNRNHERTIYMDVRSAEFAKYAANAMLATRISFMNEMSNLAD CCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH KVGADIEAVRRGIGSDPRIGYHFLYAGVGYGGSCFPKDVQALIRTAGENGQPLRILEAVE HHCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHH AANHAQKDVLIGKIEQRFGADLTGREFAVWGLAFKPNTDDMREAPSRRLIAALLERGATV HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHCCHHHHHHHHHHCCCEE RAYDPVAIDEARRVFALDFGDDAKALARLHLVDTQDAAVTGADALVIVTEWKEFRSPDFT EEECCCCCCCCCEEEEEECCCCHHHHHEEEEECCCCCEEECCCEEEEEECHHHHCCCCHH RLKAELKAPVIFDGRNLYEPDAMAELGIDYYAIGRPYVDPQSSSRG HHHHHHCCCEEECCCCCCCCHHHHHHCCCEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]