| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116689004
Identifier: 116689004
GI number: 116689004
Start: 1091486
End: 1091860
Strand: Direct
Name: 116689004
Synonym: Bcen2424_0981
Alternate gene names: NA
Gene position: 1091486-1091860 (Clockwise)
Preceding gene: 116689002
Following gene: 116689005
Centisome position: 31.33
GC content: 62.13
Gene sequence:
>375_bases ATGCGGCCGACGCGGATTGGCGCGCAGGCGGGTGCGTCGTTTGTCGGACGAATGGCTCGACGTGCGGCGACCCACGCCGG TGTGAAGGGGCTGCAACAAATGTTGCATCGCAATAAAGCGGCCGGTGAAGTATGGGCGCGGCGTGTTTTTTGTTGGCTTA TATTACGGAGCATTACGGTCGCAGCGACGCAATGTTATGCGGCTCAAAACCGGATGGCCGCGCATCGCAAGGAGAACGAG ACGATCCGTCCGATGACGGCCGCATGTTCACCCTCCGGCAGCCAGCGTCCGCACACCGATGCTGCAACTGCACACCAATC GATGCGTGTCGCCGCGGATGGCGTGTGCCGCCTTTCGATCCGCGCCGGCGTTTGA
Upstream 100 bases:
>100_bases GGTGCGCGCGCTTGCCAAACTCCGGCGCTAGGCTTGGCGCTCCAAACGACGGGCCGCGCGCAATGCGGGCCGCTGCGGGC CGACCCGCGCTGATTGAAAC
Downstream 100 bases:
>100_bases AAATTACGATTTGACTCATGCCCCGCTTTCGGTTGAAGCTAATAGCTTGCTGTCCGAAGGGGGCTGTGCCTGCATGAGTT CGACCTTGACCGTTCGTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MRPTRIGAQAGASFVGRMARRAATHAGVKGLQQMLHRNKAAGEVWARRVFCWLILRSITVAATQCYAAQNRMAAHRKENE TIRPMTAACSPSGSQRPHTDAATAHQSMRVAADGVCRLSIRAGV
Sequences:
>Translated_124_residues MRPTRIGAQAGASFVGRMARRAATHAGVKGLQQMLHRNKAAGEVWARRVFCWLILRSITVAATQCYAAQNRMAAHRKENE TIRPMTAACSPSGSQRPHTDAATAHQSMRVAADGVCRLSIRAGV >Mature_124_residues MRPTRIGAQAGASFVGRMARRAATHAGVKGLQQMLHRNKAAGEVWARRVFCWLILRSITVAATQCYAAQNRMAAHRKENE TIRPMTAACSPSGSQRPHTDAATAHQSMRVAADGVCRLSIRAGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13425; Mature: 13425
Theoretical pI: Translated: 12.17; Mature: 12.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPTRIGAQAGASFVGRMARRAATHAGVKGLQQMLHRNKAAGEVWARRVFCWLILRSITV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH AATQCYAAQNRMAAHRKENETIRPMTAACSPSGSQRPHTDAATAHQSMRVAADGVCRLSI HHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEE RAGV ECCC >Mature Secondary Structure MRPTRIGAQAGASFVGRMARRAATHAGVKGLQQMLHRNKAAGEVWARRVFCWLILRSITV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH AATQCYAAQNRMAAHRKENETIRPMTAACSPSGSQRPHTDAATAHQSMRVAADGVCRLSI HHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEE RAGV ECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA