Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688968

Identifier: 116688968

GI number: 116688968

Start: 1051982

End: 1053193

Strand: Reverse

Name: 116688968

Synonym: Bcen2424_0945

Alternate gene names: NA

Gene position: 1053193-1051982 (Counterclockwise)

Preceding gene: 116688971

Following gene: 116688964

Centisome position: 30.23

GC content: 68.07

Gene sequence:

>1212_bases
ATGAACAATATGCACCTGTCATCCATGTTGATCCCGGCGCTGTGCGCGTCGCTACTCGCATCGAGCGTCGCGCTCGCCGA
CGGCAGCGGCCCGCCACCCTACGTCGAAGGCAACCGCGCACCGAAAGGATTCGCGCGCCCGCCGTTCCACACGAAGCCGC
GTGCGAGCACGGCCACGATCGCCGGCCTCACGCCGGCACTCGCGCGGCATGCATACGGGTTCGACGCGATCGCGAACCAG
GGCGACGGAATGGTCGTCGCGATCGTCGACGCGTACGACGACCCGAAGATCGAATCCGATCTCGGCGTGTTCAGCACCGC
GTTCTCGCTGCCGGCCTGCACGTCGTCGAACGGCTGTTTCACCAAGGTGTACGCGCACGGGGCACGGCCCAAGCCCGATT
CGGGCTGGGCGCTCGAGATCTCGCTCGATGTCGAATGGGTGCATGCGATCGCACCGAAGGCGAAGATCGTGCTCGTCGAG
GCCGCATCGGCCAGCTTCAGCGACCTGCTGGCCGCGGTCGACGTCGCGGTCAAGCGCGGCGCGTCGGTCGTGTCGATGAG
TTTCGGCGGCAACGAATTCAGCAGCGAGACCGGCTTCGACGGCCACTTCAACGTACCGGGCGTCACGTTCGTCGCATCGT
CAGGCGACAGCGGCACCGGCACCGAATACCCGGCCGCGTCGCGTTACGTGGTATCCGTCGGCGGCACGACGCTGTCGTCG
GACACGGCCGGCAACTACATCGGCGAGGCGGCATGGAGCGGCAGCGGCGGCGGCGTGAGCAACGTCGAGGCCGAGCCGGC
CGGCCAGACCGCGTGGCCGATTCCGGTGGCCGGCAAGCGCGGCGTACCCGACGTCAGCTACGACGCGAATCCGTCCAGCG
GTTTCGCGGTGTACGACTCGGTCACCTATCAGGGGCAGGCCGGCTGGTTCCAGGTCGGCGGCACGAGCGCGGGGGCGCCG
CAATGGTCGGCGCTCGTCGCGATCGCGAATTCGCTGCGCACGGCGGCCGGCAAGAAATCGTTGAGCGGCACCTACGACAC
GCTCTATACGGTCGGTAAAACCGCGTACGGCAGCGACTTCCACGACGTGACGACCGGGTCCAACGGCAATTGCGGCAGCA
TCTGCAATGCGGCGGGCGGCTACGACTACGTGACGGGCCTCGGTTCGCCGATCGCGCCGGCGCTCGTGCAGGCGCTCGTC
ACGCGGCCGTAA

Upstream 100 bases:

>100_bases
ATCAGACATTCCCGTATCCGGCCGATATTCGATGTAATTACCTTCGGCGATTTCGTAAAATTGTTTCGCTACTCCACCCG
ATCGACATGGAGACTCAAAA

Downstream 100 bases:

>100_bases
TCGCGCGGCCTCGGCCGGTGGACTCGCGGCACGTGGTTCAGCCGCCGCGCCACGCGCGGTCGAGCGCGTTCAGCGTCGTC
AACGCCCCGCCTTTCAGCCC

Product: peptidase S8/S53 subtilisin kexin sedolisin

Products: NA

Alternate protein names: Serine Protease; Peptidase S8 And; Peptidase S8/S53 Subtilisin Kexin Sedolisin; Kumamolisin; Ig Family Protein; Protease-Like Protein; Protease; Pseudomonapepsin; Serine Protease Kumamolysin; Protease Related Protein; Peptidase S8 And S; Subtilase Family Serine Protease; Physarolisin II; Serine-Carboxyl Peptidase; Neutral Zinc Metalloprotease; Lipoprotein; Protease Protein; Serine Protease Subtilase Family; Peptidase S8 Or; Kelch Repeat-Containing Protein; Xanthomonapepsin Related Protein; Peptidase Related Protein; Pro-Kumamolisin Activation Domain-Containing Protein; Conserved Hypothethical Protein Peptidase S8 And; Curculin Domain-Containing Protein; Kumamolisin/Serine Peptidase; Subtilisin-Like Serine Protease; Membrane Associated Serine Protease; Protease-Like; Chain A Kumamolisin-As Apo; Pro-Kumamolisin Activation Domain Protein; Subtilase Family Protein

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MNNMHLSSMLIPALCASLLASSVALADGSGPPPYVEGNRAPKGFARPPFHTKPRASTATIAGLTPALARHAYGFDAIANQ
GDGMVVAIVDAYDDPKIESDLGVFSTAFSLPACTSSNGCFTKVYAHGARPKPDSGWALEISLDVEWVHAIAPKAKIVLVE
AASASFSDLLAAVDVAVKRGASVVSMSFGGNEFSSETGFDGHFNVPGVTFVASSGDSGTGTEYPAASRYVVSVGGTTLSS
DTAGNYIGEAAWSGSGGGVSNVEAEPAGQTAWPIPVAGKRGVPDVSYDANPSSGFAVYDSVTYQGQAGWFQVGGTSAGAP
QWSALVAIANSLRTAAGKKSLSGTYDTLYTVGKTAYGSDFHDVTTGSNGNCGSICNAAGGYDYVTGLGSPIAPALVQALV
TRP

Sequences:

>Translated_403_residues
MNNMHLSSMLIPALCASLLASSVALADGSGPPPYVEGNRAPKGFARPPFHTKPRASTATIAGLTPALARHAYGFDAIANQ
GDGMVVAIVDAYDDPKIESDLGVFSTAFSLPACTSSNGCFTKVYAHGARPKPDSGWALEISLDVEWVHAIAPKAKIVLVE
AASASFSDLLAAVDVAVKRGASVVSMSFGGNEFSSETGFDGHFNVPGVTFVASSGDSGTGTEYPAASRYVVSVGGTTLSS
DTAGNYIGEAAWSGSGGGVSNVEAEPAGQTAWPIPVAGKRGVPDVSYDANPSSGFAVYDSVTYQGQAGWFQVGGTSAGAP
QWSALVAIANSLRTAAGKKSLSGTYDTLYTVGKTAYGSDFHDVTTGSNGNCGSICNAAGGYDYVTGLGSPIAPALVQALV
TRP
>Mature_403_residues
MNNMHLSSMLIPALCASLLASSVALADGSGPPPYVEGNRAPKGFARPPFHTKPRASTATIAGLTPALARHAYGFDAIANQ
GDGMVVAIVDAYDDPKIESDLGVFSTAFSLPACTSSNGCFTKVYAHGARPKPDSGWALEISLDVEWVHAIAPKAKIVLVE
AASASFSDLLAAVDVAVKRGASVVSMSFGGNEFSSETGFDGHFNVPGVTFVASSGDSGTGTEYPAASRYVVSVGGTTLSS
DTAGNYIGEAAWSGSGGGVSNVEAEPAGQTAWPIPVAGKRGVPDVSYDANPSSGFAVYDSVTYQGQAGWFQVGGTSAGAP
QWSALVAIANSLRTAAGKKSLSGTYDTLYTVGKTAYGSDFHDVTTGSNGNCGSICNAAGGYDYVTGLGSPIAPALVQALV
TRP

Specific function: Unknown

COG id: COG4934

COG function: function code O; Predicted protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40890; Mature: 40890

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNMHLSSMLIPALCASLLASSVALADGSGPPPYVEGNRAPKGFARPPFHTKPRASTATI
CCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
AGLTPALARHAYGFDAIANQGDGMVVAIVDAYDDPKIESDLGVFSTAFSLPACTSSNGCF
CCCCHHHHHHHCCCHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCE
TKVYAHGARPKPDSGWALEISLDVEWVHAIAPKAKIVLVEAASASFSDLLAAVDVAVKRG
EEEEECCCCCCCCCCEEEEEEEEEEEHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHCC
ASVVSMSFGGNEFSSETGFDGHFNVPGVTFVASSGDSGTGTEYPAASRYVVSVGGTTLSS
CEEEEEECCCCCCCCCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCEECC
DTAGNYIGEAAWSGSGGGVSNVEAEPAGQTAWPIPVAGKRGVPDVSYDANPSSGFAVYDS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
VTYQGQAGWFQVGGTSAGAPQWSALVAIANSLRTAAGKKSLSGTYDTLYTVGKTAYGSDF
EEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCC
HDVTTGSNGNCGSICNAAGGYDYVTGLGSPIAPALVQALVTRP
CCCCCCCCCCCCHHHCCCCCCHHHHCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MNNMHLSSMLIPALCASLLASSVALADGSGPPPYVEGNRAPKGFARPPFHTKPRASTATI
CCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
AGLTPALARHAYGFDAIANQGDGMVVAIVDAYDDPKIESDLGVFSTAFSLPACTSSNGCF
CCCCHHHHHHHCCCHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCE
TKVYAHGARPKPDSGWALEISLDVEWVHAIAPKAKIVLVEAASASFSDLLAAVDVAVKRG
EEEEECCCCCCCCCCEEEEEEEEEEEHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHCC
ASVVSMSFGGNEFSSETGFDGHFNVPGVTFVASSGDSGTGTEYPAASRYVVSVGGTTLSS
CEEEEEECCCCCCCCCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCEECC
DTAGNYIGEAAWSGSGGGVSNVEAEPAGQTAWPIPVAGKRGVPDVSYDANPSSGFAVYDS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
VTYQGQAGWFQVGGTSAGAPQWSALVAIANSLRTAAGKKSLSGTYDTLYTVGKTAYGSDF
EEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCC
HDVTTGSNGNCGSICNAAGGYDYVTGLGSPIAPALVQALVTRP
CCCCCCCCCCCCHHHCCCCCCHHHHCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA