| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is yeiW [H]
Identifier: 116688938
GI number: 116688938
Start: 1024527
End: 1024844
Strand: Direct
Name: yeiW [H]
Synonym: Bcen2424_0915
Alternate gene names: 116688938
Gene position: 1024527-1024844 (Clockwise)
Preceding gene: 116688919
Following gene: 116688939
Centisome position: 29.41
GC content: 74.84
Gene sequence:
>318_bases ATGCCTGTCCGCCCGGTGCCCGCCGAAACCCCGCCGCCGCATGCGTGCCGCGAGGGCTGCGGCGCGTGCTGCATCGCCCC GTCGATTTCCAGCCCGATTCCGGGCATGCCCGACGGCAAGCCGGCCGGCGTGCGCTGCGTGCAGCTCGGCGACGACCTGC GCTGCATGATCTTCGGCCGGCCGGAGCGCCCCGCGTGCTGCTCCGGGCTGCAGCCGTCCGCCGACATGTGCGGCGCGTCG CGCGACGACGCGCTCGCGTGGCTCACGCGCCTCGAGGCCGCGACGCGGCCGGCGCATCCAGGAGAGAAATCAGCATGA
Upstream 100 bases:
>100_bases CAGCCGGCGATGGCACAATGCGGGGTGGGGCTGCCGGACGCCGCGTCCGGTTGCCGCACCGTTTTTCGTTGTTCGTCGAG AGAGCCGAGTGTCCGTCGAA
Downstream 100 bases:
>100_bases CCGTCCCTCGCGCGCCCGGCCGGCGCCGTTTTCTCGCTGCCGCTGTCGGCGCCGTCGGCGTGTGCGTATCGCTTGCCGCG TGCGCGTCGACGTTCCCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MPVRPVPAETPPPHACREGCGACCIAPSISSPIPGMPDGKPAGVRCVQLGDDLRCMIFGRPERPACCSGLQPSADMCGAS RDDALAWLTRLEAATRPAHPGEKSA
Sequences:
>Translated_105_residues MPVRPVPAETPPPHACREGCGACCIAPSISSPIPGMPDGKPAGVRCVQLGDDLRCMIFGRPERPACCSGLQPSADMCGAS RDDALAWLTRLEAATRPAHPGEKSA >Mature_104_residues PVRPVPAETPPPHACREGCGACCIAPSISSPIPGMPDGKPAGVRCVQLGDDLRCMIFGRPERPACCSGLQPSADMCGASR DDALAWLTRLEAATRPAHPGEKSA
Specific function: Unknown
COG id: COG0727
COG function: function code R; Predicted Fe-S-cluster oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0153 family [H]
Homologues:
Organism=Escherichia coli, GI87082060, Length=82, Percent_Identity=64.6341463414634, Blast_Score=108, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005358 [H]
Pfam domain/function: PF03692 UPF0153 [H]
EC number: NA
Molecular weight: Translated: 10894; Mature: 10762
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 12.4 %Cys+Met (Translated Protein) 8.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 11.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVRPVPAETPPPHACREGCGACCIAPSISSPIPGMPDGKPAGVRCVQLGDDLRCMIFGR CCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEC PERPACCSGLQPSADMCGASRDDALAWLTRLEAATRPAHPGEKSA CCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PVRPVPAETPPPHACREGCGACCIAPSISSPIPGMPDGKPAGVRCVQLGDDLRCMIFGR CCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEC PERPACCSGLQPSADMCGASRDDALAWLTRLEAATRPAHPGEKSA CCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]