| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is livG [H]
Identifier: 116688930
GI number: 116688930
Start: 1016045
End: 1016902
Strand: Reverse
Name: livG [H]
Synonym: Bcen2424_0907
Alternate gene names: 116688930
Gene position: 1016902-1016045 (Counterclockwise)
Preceding gene: 116688931
Following gene: 116688929
Centisome position: 29.19
GC content: 67.37
Gene sequence:
>858_bases ATGAACGGAACGGCTCTCTACCAGTTCACGCCGCCGCCCGAGGACGAGCTGCTGGCCGTCAGCGGCAGCGCATCGATGGG GCGCGTCGTGCCGGACGGCATCGATACGTCGCACGGCACGATCCTCTATCTGGAGGATATCGAGGTGAGCTTCGACGGCT TTCGCGCGCTGAAGAAGCTGTCGCTCGCGATCGACGCGGGCGAGCTGCGCTGCGTGATCGGCCCGAACGGCGCGGGCAAG ACGACGATGATGGACGTCATCACCGGCAAGACGCGGCCCGATGCGGGCAAGGTGTTTCTGGGCCAGACGATCGACCTCGC GCGGATGAACGAGCCCGAGATCGCGCGGGCCGGCATCGGCCGCAAGTTCCAGAAGCCGACCGTGTTCGAACAGCATCCGG TGTGGGAAAACCTCGAACTCGCGATGCAGACCGACAAGGGCTGGCTCGCGTCGCTGCGCGCGCGGCTCGACCGCACCGCG CAGGGAAAGATCGAGGAAACGCTCGCGCTGATCGGCCTCGAAAGCCACGCGTATCGCGCGGCCGGCGAGTTGTCGCACGG GCAGAAGCAGCGGCTCGAAATCGGCATGCTGCTGATGCAGCGCCCCGCGCTGCTGCTGCTCGACGAGCCGGCGGCCGGGA TGACCGACCACGAGACGATGGAACTCGCCGAGCTGCTGAACACGCTGCGCGGCACCTGCTCGATGATGGTCGTCGAGCAC GACATGGAGTTCGTCGCGGCGCTCGCGGGCGACACGGGACGCGTGACGGTGATGGCCGAAGGCGCGGTGCTCGCGCACGG CACGCTCGACCAGGTCAAGCGCGACGACGCGGTGATCGAGTCTTACCTCGGACGATGA
Upstream 100 bases:
>100_bases GGCTGTTCTTCCTCGGCCTGATCTTCGTGCTCGTGCCGCTCCTGCTGCCGCGCGGGATCATGGGCCTCGTCGAAACCGTG CTCGCGAAGGGGAAACGCGC
Downstream 100 bases:
>100_bases TGCGATGCTGAAAATCGAAGCGCTGAACCAGTACTACGGCGGCAGCCATATCCTGCGCAACGTGAACCTCGTCGCCGACG ACGGCAAGCTCACCGTGCTG
Product: ABC transporter related
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: LIV-I protein G [H]
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MNGTALYQFTPPPEDELLAVSGSASMGRVVPDGIDTSHGTILYLEDIEVSFDGFRALKKLSLAIDAGELRCVIGPNGAGK TTMMDVITGKTRPDAGKVFLGQTIDLARMNEPEIARAGIGRKFQKPTVFEQHPVWENLELAMQTDKGWLASLRARLDRTA QGKIEETLALIGLESHAYRAAGELSHGQKQRLEIGMLLMQRPALLLLDEPAAGMTDHETMELAELLNTLRGTCSMMVVEH DMEFVAALAGDTGRVTVMAEGAVLAHGTLDQVKRDDAVIESYLGR
Sequences:
>Translated_285_residues MNGTALYQFTPPPEDELLAVSGSASMGRVVPDGIDTSHGTILYLEDIEVSFDGFRALKKLSLAIDAGELRCVIGPNGAGK TTMMDVITGKTRPDAGKVFLGQTIDLARMNEPEIARAGIGRKFQKPTVFEQHPVWENLELAMQTDKGWLASLRARLDRTA QGKIEETLALIGLESHAYRAAGELSHGQKQRLEIGMLLMQRPALLLLDEPAAGMTDHETMELAELLNTLRGTCSMMVVEH DMEFVAALAGDTGRVTVMAEGAVLAHGTLDQVKRDDAVIESYLGR >Mature_285_residues MNGTALYQFTPPPEDELLAVSGSASMGRVVPDGIDTSHGTILYLEDIEVSFDGFRALKKLSLAIDAGELRCVIGPNGAGK TTMMDVITGKTRPDAGKVFLGQTIDLARMNEPEIARAGIGRKFQKPTVFEQHPVWENLELAMQTDKGWLASLRARLDRTA QGKIEETLALIGLESHAYRAAGELSHGQKQRLEIGMLLMQRPALLLLDEPAAGMTDHETMELAELLNTLRGTCSMMVVEH DMEFVAALAGDTGRVTVMAEGAVLAHGTLDQVKRDDAVIESYLGR
Specific function: Component of the leucine-specific transport system [H]
COG id: COG4674
COG function: function code R; Uncharacterized ABC-type transport system, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI150417984, Length=245, Percent_Identity=31.0204081632653, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI27881501, Length=224, Percent_Identity=27.6785714285714, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI30795238, Length=224, Percent_Identity=27.6785714285714, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI31657092, Length=246, Percent_Identity=26.0162601626016, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI27436953, Length=267, Percent_Identity=24.3445692883895, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI116734710, Length=216, Percent_Identity=27.7777777777778, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI27262624, Length=222, Percent_Identity=25.2252252252252, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI27262626, Length=222, Percent_Identity=25.2252252252252, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI47078218, Length=220, Percent_Identity=27.7272727272727, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI45446740, Length=220, Percent_Identity=27.7272727272727, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI105990541, Length=217, Percent_Identity=25.8064516129032, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI148612853, Length=237, Percent_Identity=30.379746835443, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI21536376, Length=239, Percent_Identity=25.1046025104602, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI11967971, Length=183, Percent_Identity=28.4153005464481, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI6005701, Length=223, Percent_Identity=25.5605381165919, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI153792144, Length=228, Percent_Identity=24.5614035087719, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI27477115, Length=190, Percent_Identity=27.3684210526316, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI11967969, Length=175, Percent_Identity=28, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI46592971, Length=217, Percent_Identity=25.8064516129032, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI46592956, Length=217, Percent_Identity=25.8064516129032, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI46592978, Length=217, Percent_Identity=25.8064516129032, Blast_Score=65, Evalue=7e-11, Organism=Homo sapiens, GI46592964, Length=217, Percent_Identity=25.8064516129032, Blast_Score=65, Evalue=7e-11, Organism=Homo sapiens, GI46592898, Length=217, Percent_Identity=25.8064516129032, Blast_Score=65, Evalue=7e-11, Organism=Homo sapiens, GI46592915, Length=217, Percent_Identity=25.8064516129032, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI1789864, Length=258, Percent_Identity=36.4341085271318, Blast_Score=141, Evalue=5e-35, Organism=Escherichia coli, GI87081791, Length=236, Percent_Identity=30.0847457627119, Blast_Score=102, Evalue=4e-23, Organism=Escherichia coli, GI1790525, Length=231, Percent_Identity=29.4372294372294, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1789593, Length=244, Percent_Identity=27.0491803278689, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1787370, Length=235, Percent_Identity=28.5106382978723, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1788225, Length=239, Percent_Identity=30.1255230125523, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1790739, Length=236, Percent_Identity=28.8135593220339, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1790190, Length=248, Percent_Identity=28.6290322580645, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1788761, Length=237, Percent_Identity=29.1139240506329, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1786398, Length=224, Percent_Identity=29.4642857142857, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1786253, Length=231, Percent_Identity=27.2727272727273, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI87082268, Length=247, Percent_Identity=29.1497975708502, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1789672, Length=241, Percent_Identity=26.9709543568465, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1787792, Length=245, Percent_Identity=25.7142857142857, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI87081782, Length=274, Percent_Identity=27.3722627737226, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI87081709, Length=245, Percent_Identity=25.7142857142857, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1790162, Length=215, Percent_Identity=26.046511627907, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1790467, Length=223, Percent_Identity=30.0448430493274, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI87082267, Length=250, Percent_Identity=28.4, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1788897, Length=218, Percent_Identity=27.5229357798165, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1789032, Length=226, Percent_Identity=28.3185840707965, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1788210, Length=246, Percent_Identity=26.4227642276423, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1788472, Length=228, Percent_Identity=26.3157894736842, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1786872, Length=231, Percent_Identity=27.7056277056277, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1786345, Length=252, Percent_Identity=26.5873015873016, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1789991, Length=256, Percent_Identity=28.125, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1787029, Length=227, Percent_Identity=25.9911894273128, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1789873, Length=209, Percent_Identity=26.3157894736842, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1787164, Length=229, Percent_Identity=29.2576419213974, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI1787089, Length=231, Percent_Identity=25.974025974026, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI87081834, Length=198, Percent_Identity=27.2727272727273, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1790544, Length=246, Percent_Identity=26.8292682926829, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1787105, Length=216, Percent_Identity=28.2407407407407, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1789586, Length=229, Percent_Identity=29.2576419213974, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1787972, Length=243, Percent_Identity=29.6296296296296, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI48995001, Length=229, Percent_Identity=26.6375545851528, Blast_Score=71, Evalue=9e-14, Organism=Escherichia coli, GI1786563, Length=225, Percent_Identity=28.4444444444444, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1787182, Length=238, Percent_Identity=28.1512605042017, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1788450, Length=246, Percent_Identity=28.4552845528455, Blast_Score=68, Evalue=8e-13, Organism=Escherichia coli, GI48994943, Length=244, Percent_Identity=27.4590163934426, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI145693107, Length=272, Percent_Identity=25.7352941176471, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1786981, Length=215, Percent_Identity=32.093023255814, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1786803, Length=231, Percent_Identity=25.974025974026, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1786319, Length=220, Percent_Identity=27.7272727272727, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787758, Length=249, Percent_Identity=23.6947791164659, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1788053, Length=173, Percent_Identity=27.7456647398844, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787112, Length=231, Percent_Identity=27.2727272727273, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1788506, Length=240, Percent_Identity=27.5, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1788002, Length=250, Percent_Identity=24.8, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1787712, Length=203, Percent_Identity=26.1083743842365, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17510237, Length=236, Percent_Identity=28.8135593220339, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI115533608, Length=219, Percent_Identity=27.3972602739726, Blast_Score=80, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17565586, Length=214, Percent_Identity=30.3738317757009, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71983516, Length=277, Percent_Identity=28.5198555956679, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71983523, Length=277, Percent_Identity=28.5198555956679, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71983510, Length=277, Percent_Identity=28.5198555956679, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17541710, Length=220, Percent_Identity=26.3636363636364, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71984940, Length=257, Percent_Identity=25.6809338521401, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI115533592, Length=236, Percent_Identity=25, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17558664, Length=216, Percent_Identity=25, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI25146777, Length=234, Percent_Identity=23.0769230769231, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI71996809, Length=224, Percent_Identity=25.8928571428571, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI193211015, Length=224, Percent_Identity=25.8928571428571, Blast_Score=65, Evalue=5e-11, Organism=Caenorhabditis elegans, GI193211017, Length=224, Percent_Identity=25.8928571428571, Blast_Score=64, Evalue=6e-11, Organism=Drosophila melanogaster, GI28574150, Length=219, Percent_Identity=29.2237442922374, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI116007328, Length=219, Percent_Identity=29.2237442922374, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI221512771, Length=236, Percent_Identity=25.8474576271186, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24666092, Length=246, Percent_Identity=23.5772357723577, Blast_Score=71, Evalue=9e-13, Organism=Drosophila melanogaster, GI24643674, Length=233, Percent_Identity=25.7510729613734, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI161076682, Length=219, Percent_Identity=27.8538812785388, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI161076684, Length=219, Percent_Identity=27.8538812785388, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24581617, Length=219, Percent_Identity=27.8538812785388, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24581615, Length=219, Percent_Identity=27.8538812785388, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI28574533, Length=165, Percent_Identity=32.1212121212121, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI85724864, Length=179, Percent_Identity=30.1675977653631, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24580555, Length=179, Percent_Identity=30.1675977653631, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI85816269, Length=179, Percent_Identity=30.1675977653631, Blast_Score=68, Evalue=8e-12, Organism=Drosophila melanogaster, GI24580553, Length=179, Percent_Identity=30.1675977653631, Blast_Score=68, Evalue=8e-12, Organism=Drosophila melanogaster, GI28574744, Length=226, Percent_Identity=26.9911504424779, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 30930; Mature: 30930
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGTALYQFTPPPEDELLAVSGSASMGRVVPDGIDTSHGTILYLEDIEVSFDGFRALKKL CCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECHHHHHHHHHH SLAIDAGELRCVIGPNGAGKTTMMDVITGKTRPDAGKVFLGQTIDLARMNEPEIARAGIG HHEEECCCEEEEECCCCCCCCEEEEECCCCCCCCCCCEEECCEEEECCCCCCCHHHHCCC RKFQKPTVFEQHPVWENLELAMQTDKGWLASLRARLDRTAQGKIEETLALIGLESHAYRA CCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHEEECCHHHHHH AGELSHGQKQRLEIGMLLMQRPALLLLDEPAAGMTDHETMELAELLNTLRGTCSMMVVEH HHCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHEEEEEEHH DMEFVAALAGDTGRVTVMAEGAVLAHGTLDQVKRDDAVIESYLGR HHHHHHHHCCCCCEEEEEECCEEEECCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNGTALYQFTPPPEDELLAVSGSASMGRVVPDGIDTSHGTILYLEDIEVSFDGFRALKKL CCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECHHHHHHHHHH SLAIDAGELRCVIGPNGAGKTTMMDVITGKTRPDAGKVFLGQTIDLARMNEPEIARAGIG HHEEECCCEEEEECCCCCCCCEEEEECCCCCCCCCCCEEECCEEEECCCCCCCHHHHCCC RKFQKPTVFEQHPVWENLELAMQTDKGWLASLRARLDRTAQGKIEETLALIGLESHAYRA CCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHEEECCHHHHHH AGELSHGQKQRLEIGMLLMQRPALLLLDEPAAGMTDHETMELAELLNTLRGTCSMMVVEH HHCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHEEEEEEHH DMEFVAALAGDTGRVTVMAEGAVLAHGTLDQVKRDDAVIESYLGR HHHHHHHHCCCCCEEEEEECCEEEECCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]