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The map label for this gene is ureD [H]

Identifier: 116688926

GI number: 116688926

Start: 1012271

End: 1013146

Strand: Reverse

Name: ureD [H]

Synonym: Bcen2424_0903

Alternate gene names: 116688926

Gene position: 1013146-1012271 (Counterclockwise)

Preceding gene: 116688927

Following gene: 116688925

Centisome position: 29.08

GC content: 73.52

Gene sequence:

>876_bases
ATGTCCGCCCCCGATTCGCATGCCCCGCTGTCCCGCCCCGCCGTCGCCAAGTCGTGGCGCGGCCGCCTCGAACTCGGCTT
CGAGCGGCACGGCGCGCGCACGACGCTCGCGCACCGGTTGCACGACGGCCCGCTGCGCGTGCAGCGGCCGCTGTACCCGG
AAGGCGACGCGATCTGCCATGCGGTGATCGTCCATCCGCCGGGCGGCGTCGCGGGCGGCGACCGGCTCGACATCGACATC
GCGCTCGGCGACGGCACGCACGCGGTACTGACGACGCCCGGCGCGACCAAGTGGTACAAATCGAACGGCCTCGATGCGAC
GCAGCGCATCGGCATCGCGGTCGGCCCGCACGCGAAGCTCGACTGGCTGCCGCAGAACAACCTGTTCTTCGACGCGGCGC
ACGCGGCGCTCGACTTCACGGTGACGCTCGGCGAAGGGGCAAGCGCGATCGGCTGGGACGCGACGCAGATCGGCCGGCAG
GCGGCCGGCGAAACCTGGGCAGCGGGACGCATCGCGTCGACCTCGGCGCTCGTCGCCGCCGACGGCCGGCCGCTCTGGAC
CGAGCGCGCGCTGCTCGACGCGCGCGACCCGCTGCGCGGCGCGCTGCAGGGCCTCGCCGGCTTTCCTGCCTACGGCACGC
TGTGGGCGGCCGGCGCCGCATGCGACGCCGCGCTCGCCGAAGCGCTCGCTGCGCGCATGCCGTTCGACGACACGCTCCGG
GCGGCCGCCACCTGCGTGACACCAGGCGTCGTGCTGGTGCGCGCGATATCGACGTCGATGGAAGCGTTGCAGCGCCACTT
CACCGACTGCTGGCTCCGCTTGCGCCCCATCGTGCACGACGTCGATGCGCGGCCGCTGCGTCTCTGGCAAACCTGA

Upstream 100 bases:

>100_bases
CGATCAAAGCCGGCACTTTCAACGCACGCGGCATCTGCATTATTGTTCCGGTAGCATCCACGTTCTTCGCACCCGCTTCC
TCGTTTCCCGTTCGCCGCCG

Downstream 100 bases:

>100_bases
CCGCGCACGCATCACGCACCGTTTCGGCGCAACGCCACCCCGCGCGCCGCACGCTCTCCATGCATCACGCACCACGAACG
CGCACGGAGGCACGTCGGAT

Product: urease accessory protein UreD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MSAPDSHAPLSRPAVAKSWRGRLELGFERHGARTTLAHRLHDGPLRVQRPLYPEGDAICHAVIVHPPGGVAGGDRLDIDI
ALGDGTHAVLTTPGATKWYKSNGLDATQRIGIAVGPHAKLDWLPQNNLFFDAAHAALDFTVTLGEGASAIGWDATQIGRQ
AAGETWAAGRIASTSALVAADGRPLWTERALLDARDPLRGALQGLAGFPAYGTLWAAGAACDAALAEALAARMPFDDTLR
AAATCVTPGVVLVRAISTSMEALQRHFTDCWLRLRPIVHDVDARPLRLWQT

Sequences:

>Translated_291_residues
MSAPDSHAPLSRPAVAKSWRGRLELGFERHGARTTLAHRLHDGPLRVQRPLYPEGDAICHAVIVHPPGGVAGGDRLDIDI
ALGDGTHAVLTTPGATKWYKSNGLDATQRIGIAVGPHAKLDWLPQNNLFFDAAHAALDFTVTLGEGASAIGWDATQIGRQ
AAGETWAAGRIASTSALVAADGRPLWTERALLDARDPLRGALQGLAGFPAYGTLWAAGAACDAALAEALAARMPFDDTLR
AAATCVTPGVVLVRAISTSMEALQRHFTDCWLRLRPIVHDVDARPLRLWQT
>Mature_290_residues
SAPDSHAPLSRPAVAKSWRGRLELGFERHGARTTLAHRLHDGPLRVQRPLYPEGDAICHAVIVHPPGGVAGGDRLDIDIA
LGDGTHAVLTTPGATKWYKSNGLDATQRIGIAVGPHAKLDWLPQNNLFFDAAHAALDFTVTLGEGASAIGWDATQIGRQA
AGETWAAGRIASTSALVAADGRPLWTERALLDARDPLRGALQGLAGFPAYGTLWAAGAACDAALAEALAARMPFDDTLRA
AATCVTPGVVLVRAISTSMEALQRHFTDCWLRLRPIVHDVDARPLRLWQT

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002669 [H]

Pfam domain/function: PF01774 UreD [H]

EC number: NA

Molecular weight: Translated: 30936; Mature: 30805

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPDSHAPLSRPAVAKSWRGRLELGFERHGARTTLAHRLHDGPLRVQRPLYPEGDAICH
CCCCCCCCCCCCCHHHHHCCCCEEECHHHCCCHHHHHHHHCCCCCEECCCCCCCCCCEEE
AVIVHPPGGVAGGDRLDIDIALGDGTHAVLTTPGATKWYKSNGLDATQRIGIAVGPHAKL
EEEEECCCCCCCCCEEEEEEEECCCCEEEEECCCCCEEECCCCCCHHHHCCEEECCCCCE
DWLPQNNLFFDAAHAALDFTVTLGEGASAIGWDATQIGRQAAGETWAAGRIASTSALVAA
EECCCCCEEEEECCCEEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEE
DGRPLWTERALLDARDPLRGALQGLAGFPAYGTLWAAGAACDAALAEALAARMPFDDTLR
CCCCCHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCHHHH
AAATCVTPGVVLVRAISTSMEALQRHFTDCWLRLRPIVHDVDARPLRLWQT
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCC
>Mature Secondary Structure 
SAPDSHAPLSRPAVAKSWRGRLELGFERHGARTTLAHRLHDGPLRVQRPLYPEGDAICH
CCCCCCCCCCCCHHHHHCCCCEEECHHHCCCHHHHHHHHCCCCCEECCCCCCCCCCEEE
AVIVHPPGGVAGGDRLDIDIALGDGTHAVLTTPGATKWYKSNGLDATQRIGIAVGPHAKL
EEEEECCCCCCCCCEEEEEEEECCCCEEEEECCCCCEEECCCCCCHHHHCCEEECCCCCE
DWLPQNNLFFDAAHAALDFTVTLGEGASAIGWDATQIGRQAAGETWAAGRIASTSALVAA
EECCCCCEEEEECCCEEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEE
DGRPLWTERALLDARDPLRGALQGLAGFPAYGTLWAAGAACDAALAEALAARMPFDDTLR
CCCCCHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCHHHH
AAATCVTPGVVLVRAISTSMEALQRHFTDCWLRLRPIVHDVDARPLRLWQT
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA