| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688886
Identifier: 116688886
GI number: 116688886
Start: 967363
End: 968664
Strand: Direct
Name: 116688886
Synonym: Bcen2424_0863
Alternate gene names: NA
Gene position: 967363-968664 (Clockwise)
Preceding gene: 116688885
Following gene: 116688887
Centisome position: 27.77
GC content: 74.96
Gene sequence:
>1302_bases ATGACGTCCGATCCGGCGAACGTTCCCCACCCTGACGCATTGCCTAACCCGCGTGGCGGGGCCGTGCGCGCGGCCGACGC ATGGCTGGCGGCGGCCGCCGACGCATTCGAGCGGTGCGACGATGCAGCGGCGCCGCTTTCCGCGGCCGCGGCGGTGCTGG CGGAAGCCGGCTGGCTGCCGGCCGCGCGGTTCGCCGGACAACTGTCGGCCACCGTGCCGCTCCTCGCCACCGAGCCGACC TCGGCCGGCTGGCGTGCCGCGCTGCGCGATTTTCGTGCGGCCGTCGGCCGCCACAACCTGCGCGAGCTTGCGTGCTCGCC CGTTCTCTTCCAGCATTTCCGTGCGTTGCGCGCGCAAAGCGCCGCCGACCTGCGCACGAGCGCGCCGCTCGATGCGCTCG CGCTGGTCGGCCGCGCGGTGCCGCCTGCCACGCTGCGCGCGCTGCCCGATGCATTCGCGATCCGGATTCGTGCCCGCTAC GAGCAGGCGCTGCTCGGCGTGCTGCGTGCCGAACACGGCGCGCCGGGCGCGGCGCTCGACGAACTCGACGCGATGCTGGC CGCGCTCACCGACGACGGGCCGTACGATTTCTGGCGGCTCGCGGCCGCGTGCGTGCGCGCGCTGCGCGCAAGCGGCGCGC CCGAGCTGAAGCGCTTTCTCGCGCGGACCAACCTGCTGCTCGGCGAACACGCGCAGGGCCGGCGCAGCGCGCCGCCCGAA CTGGTGCGCGAGACGGTGGCGCTGCTGTGGCGCGATTTCGCGCTGTTCGGCGCCGCGGCCGAGGACGTCGCGCTCGTCGA CGTGCTGCACGACTACGGGTTGACGGTCGACTGGCACGTGGCCGGCACGCCAGCCTCCGAAGCCTTGTGGGAGGCCGATG CCGCGCGGGCCGAGCACGAGGCGGTCACCGCCGCGCCGACCCGTGCGCTCGGCGTCGTGACCGTCAACGCGCATGCCTAT GAGGATTTCCTGCAGACTGCCGATGCATCGATGGCCGACCTTGCGGCCAACCCGGCCGCGGCCGACCCGGGCGCCGCGTG GCATGCGTCCGCCGCCGCCTACCGGGTCGGCACGGCTGCGTGCGCGCTCGGGCTCGGTCACGCGGCGCTGCTGGCCGACA CGCTCGGTCTGGCATGGCGCCGCGCGGCGCACGGCGTGCCGCTTGCCGACGGCGGCCTCGATGCGCACCGCCACGCGTCC GACATGCTGCGCGCGGCGCTTCTGAAGATCGCGGCCGGCGTCGCGCCGCCGGATCTTACTGCGGCGTCCGAAGCGCTCGG CACGGCGCTCGGCCGGACCTGA
Upstream 100 bases:
>100_bases GCCCCGCGCCCACGGACACTCCGCTCAGGCCTCGCACCGGCCCGGCGCTTGCGCGCCGCGGTTCGCGCGAGCGACTTGAC GATGACAGGCGCGCGTGTCC
Downstream 100 bases:
>100_bases CGAACAAGGGGACGGACACCCGACGGCAGCCCTTGCCGCGCGGGCCTGCAACACGCTGCCGACAGCGCCCGCGCGCGTGT TAGAGTGCCGTGTGATCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MTSDPANVPHPDALPNPRGGAVRAADAWLAAAADAFERCDDAAAPLSAAAAVLAEAGWLPAARFAGQLSATVPLLATEPT SAGWRAALRDFRAAVGRHNLRELACSPVLFQHFRALRAQSAADLRTSAPLDALALVGRAVPPATLRALPDAFAIRIRARY EQALLGVLRAEHGAPGAALDELDAMLAALTDDGPYDFWRLAAACVRALRASGAPELKRFLARTNLLLGEHAQGRRSAPPE LVRETVALLWRDFALFGAAAEDVALVDVLHDYGLTVDWHVAGTPASEALWEADAARAEHEAVTAAPTRALGVVTVNAHAY EDFLQTADASMADLAANPAAADPGAAWHASAAAYRVGTAACALGLGHAALLADTLGLAWRRAAHGVPLADGGLDAHRHAS DMLRAALLKIAAGVAPPDLTAASEALGTALGRT
Sequences:
>Translated_433_residues MTSDPANVPHPDALPNPRGGAVRAADAWLAAAADAFERCDDAAAPLSAAAAVLAEAGWLPAARFAGQLSATVPLLATEPT SAGWRAALRDFRAAVGRHNLRELACSPVLFQHFRALRAQSAADLRTSAPLDALALVGRAVPPATLRALPDAFAIRIRARY EQALLGVLRAEHGAPGAALDELDAMLAALTDDGPYDFWRLAAACVRALRASGAPELKRFLARTNLLLGEHAQGRRSAPPE LVRETVALLWRDFALFGAAAEDVALVDVLHDYGLTVDWHVAGTPASEALWEADAARAEHEAVTAAPTRALGVVTVNAHAY EDFLQTADASMADLAANPAAADPGAAWHASAAAYRVGTAACALGLGHAALLADTLGLAWRRAAHGVPLADGGLDAHRHAS DMLRAALLKIAAGVAPPDLTAASEALGTALGRT >Mature_432_residues TSDPANVPHPDALPNPRGGAVRAADAWLAAAADAFERCDDAAAPLSAAAAVLAEAGWLPAARFAGQLSATVPLLATEPTS AGWRAALRDFRAAVGRHNLRELACSPVLFQHFRALRAQSAADLRTSAPLDALALVGRAVPPATLRALPDAFAIRIRARYE QALLGVLRAEHGAPGAALDELDAMLAALTDDGPYDFWRLAAACVRALRASGAPELKRFLARTNLLLGEHAQGRRSAPPEL VRETVALLWRDFALFGAAAEDVALVDVLHDYGLTVDWHVAGTPASEALWEADAARAEHEAVTAAPTRALGVVTVNAHAYE DFLQTADASMADLAANPAAADPGAAWHASAAAYRVGTAACALGLGHAALLADTLGLAWRRAAHGVPLADGGLDAHRHASD MLRAALLKIAAGVAPPDLTAASEALGTALGRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44816; Mature: 44685
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSDPANVPHPDALPNPRGGAVRAADAWLAAAADAFERCDDAAAPLSAAAAVLAEAGWLP CCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCH AARFAGQLSATVPLLATEPTSAGWRAALRDFRAAVGRHNLRELACSPVLFQHFRALRAQS HHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AADLRTSAPLDALALVGRAVPPATLRALPDAFAIRIRARYEQALLGVLRAEHGAPGAALD HHHHHHCCCHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH ELDAMLAALTDDGPYDFWRLAAACVRALRASGAPELKRFLARTNLLLGEHAQGRRSAPPE HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHH LVRETVALLWRDFALFGAAAEDVALVDVLHDYGLTVDWHVAGTPASEALWEADAARAEHE HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHH AVTAAPTRALGVVTVNAHAYEDFLQTADASMADLAANPAAADPGAAWHASAAAYRVGTAA HHHCCCCCEEEEEEECHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH CALGLGHAALLADTLGLAWRRAAHGVPLADGGLDAHRHASDMLRAALLKIAAGVAPPDLT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHH AASEALGTALGRT HHHHHHHHHHCCC >Mature Secondary Structure TSDPANVPHPDALPNPRGGAVRAADAWLAAAADAFERCDDAAAPLSAAAAVLAEAGWLP CCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCH AARFAGQLSATVPLLATEPTSAGWRAALRDFRAAVGRHNLRELACSPVLFQHFRALRAQS HHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AADLRTSAPLDALALVGRAVPPATLRALPDAFAIRIRARYEQALLGVLRAEHGAPGAALD HHHHHHCCCHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH ELDAMLAALTDDGPYDFWRLAAACVRALRASGAPELKRFLARTNLLLGEHAQGRRSAPPE HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHH LVRETVALLWRDFALFGAAAEDVALVDVLHDYGLTVDWHVAGTPASEALWEADAARAEHE HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHH AVTAAPTRALGVVTVNAHAYEDFLQTADASMADLAANPAAADPGAAWHASAAAYRVGTAA HHHCCCCCEEEEEEECHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH CALGLGHAALLADTLGLAWRRAAHGVPLADGGLDAHRHASDMLRAALLKIAAGVAPPDLT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHH AASEALGTALGRT HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA