| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688832
Identifier: 116688832
GI number: 116688832
Start: 909702
End: 910145
Strand: Reverse
Name: 116688832
Synonym: Bcen2424_0809
Alternate gene names: NA
Gene position: 910145-909702 (Counterclockwise)
Preceding gene: 116688833
Following gene: 116688828
Centisome position: 26.12
GC content: 65.32
Gene sequence:
>444_bases ATGAGCCAGAACATCACGCGCAATCCATCCCGCTCCCATTCGTCGCGATCGAACTGGAATGCGTCGCAGCACCGCGCGCT CCGCAAGGAATTGCTGATCCTGCGATCCGAAGTCGAGCGGCTCGAACTCGCGGAAGCCGCCGCCGAAATGCGTCAGGCCG TCACGCGCTTCAGTTGGCTCAAGGTATTCATCCCCGGCCTGTCCTCGCACAAGTTCGGCCAGTCGGCCAAGAACCTGAAC GCAAGCCTCGGCCAGCTCGTCAACCAGTATCCGATGCTGAGTTCGCTCGCGTCGCTCGTGCTGGCGAAGCCCGTCCGCTC GCTGCTGCGCGCAAGCGCGGGCCCCGCGTTGAAGTGGGGCACGCTCGGCTTCGCCGCATGGGAGGTCTACCGGATCTGGA AGCAGTCCCGCGACGAGCGCGGGCTCGACGCACGCGACGACTGA
Upstream 100 bases:
>100_bases GAGGCGACGCTCGCCGAACTCGAGAAAGACCGCGACCTGTTCCGCGGCAAGCCGTGAACGCCCTCGCGCTCATCCCTCTC ACCTACTTCGCCGACGCGCC
Downstream 100 bases:
>100_bases CCGTCGGCCCCCTGCGCGCACGGCCATGCGCCGCTGCGCGCCTTTCTTGCGAACTCAGCGCACGCCCCAGCACCCGGTTC GTCGGCGCCATCGCTTCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSQNITRNPSRSHSSRSNWNASQHRALRKELLILRSEVERLELAEAAAEMRQAVTRFSWLKVFIPGLSSHKFGQSAKNLN ASLGQLVNQYPMLSSLASLVLAKPVRSLLRASAGPALKWGTLGFAAWEVYRIWKQSRDERGLDARDD
Sequences:
>Translated_147_residues MSQNITRNPSRSHSSRSNWNASQHRALRKELLILRSEVERLELAEAAAEMRQAVTRFSWLKVFIPGLSSHKFGQSAKNLN ASLGQLVNQYPMLSSLASLVLAKPVRSLLRASAGPALKWGTLGFAAWEVYRIWKQSRDERGLDARDD >Mature_146_residues SQNITRNPSRSHSSRSNWNASQHRALRKELLILRSEVERLELAEAAAEMRQAVTRFSWLKVFIPGLSSHKFGQSAKNLNA SLGQLVNQYPMLSSLASLVLAKPVRSLLRASAGPALKWGTLGFAAWEVYRIWKQSRDERGLDARDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16559; Mature: 16428
Theoretical pI: Translated: 11.48; Mature: 11.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQNITRNPSRSHSSRSNWNASQHRALRKELLILRSEVERLELAEAAAEMRQAVTRFSWL CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVFIPGLSSHKFGQSAKNLNASLGQLVNQYPMLSSLASLVLAKPVRSLLRASAGPALKWG HHHHCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH TLGFAAWEVYRIWKQSRDERGLDARDD HHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SQNITRNPSRSHSSRSNWNASQHRALRKELLILRSEVERLELAEAAAEMRQAVTRFSWL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVFIPGLSSHKFGQSAKNLNASLGQLVNQYPMLSSLASLVLAKPVRSLLRASAGPALKWG HHHHCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH TLGFAAWEVYRIWKQSRDERGLDARDD HHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA