| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688831
Identifier: 116688831
GI number: 116688831
Start: 909337
End: 909759
Strand: Direct
Name: 116688831
Synonym: Bcen2424_0808
Alternate gene names: NA
Gene position: 909337-909759 (Clockwise)
Preceding gene: 116688830
Following gene: 116688835
Centisome position: 26.1
GC content: 68.56
Gene sequence:
>423_bases ATGGAACGGGGCGCTCGACCCTTGAAGAATGTGGTGCAACGATCGTGCGGATTCACGCTCGTCGAGTTGATGGTCGCCAT GTCGCTCGCGGTGGTCGACATGGCGCCGCCCCCGGCGTTGTCGGACGCGCTCGCGCACGCGCCGCCGGACGGCGACGGTT CGCCGGTGAGCTATGAACTGACAGCGACGCCGCTCGATACCGGGCCGATGCGCGACGATGCACGCGGCACGTTCACGCTG CGCTCAAACGGAACGAAAGGCAATGCAGGAAGCGATGGCGCCGACGAACCGGGTGCTGGGGCGTGCGCTGAGTTCGCAAG AAAGGCGCGCAGCGGCGCATGGCCGTGCGCGCAGGGGGCCGACGGTCAGTCGTCGCGTGCGTCGAGCCCGCGCTCGTCGC GGGACTGCTTCCAGATCCGGTAG
Upstream 100 bases:
>100_bases TGTCGGTCGCGATCGCATGTCGCCTCGGCCGTTCGGCAAATGGCGCACGTTTGCACGCGCCGCTACAGTCGTCGCATCAC CGTGGCGGAGGGCGATTGCG
Downstream 100 bases:
>100_bases ACCTCCCATGCGGCGAAGCCGAGCGTGCCCCACTTCAACGCGGGGCCCGCGCTTGCGCGCAGCAGCGAGCGGACGGGCTT CGCCAGCACGAGCGACGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MERGARPLKNVVQRSCGFTLVELMVAMSLAVVDMAPPPALSDALAHAPPDGDGSPVSYELTATPLDTGPMRDDARGTFTL RSNGTKGNAGSDGADEPGAGACAEFARKARSGAWPCAQGADGQSSRASSPRSSRDCFQIR
Sequences:
>Translated_140_residues MERGARPLKNVVQRSCGFTLVELMVAMSLAVVDMAPPPALSDALAHAPPDGDGSPVSYELTATPLDTGPMRDDARGTFTL RSNGTKGNAGSDGADEPGAGACAEFARKARSGAWPCAQGADGQSSRASSPRSSRDCFQIR >Mature_140_residues MERGARPLKNVVQRSCGFTLVELMVAMSLAVVDMAPPPALSDALAHAPPDGDGSPVSYELTATPLDTGPMRDDARGTFTL RSNGTKGNAGSDGADEPGAGACAEFARKARSGAWPCAQGADGQSSRASSPRSSRDCFQIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14453; Mature: 14453
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERGARPLKNVVQRSCGFTLVELMVAMSLAVVDMAPPPALSDALAHAPPDGDGSPVSYEL CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCEEEEE TATPLDTGPMRDDARGTFTLRSNGTKGNAGSDGADEPGAGACAEFARKARSGAWPCAQGA EECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC DGQSSRASSPRSSRDCFQIR CCCCCCCCCCCCCCCCEECC >Mature Secondary Structure MERGARPLKNVVQRSCGFTLVELMVAMSLAVVDMAPPPALSDALAHAPPDGDGSPVSYEL CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCEEEEE TATPLDTGPMRDDARGTFTLRSNGTKGNAGSDGADEPGAGACAEFARKARSGAWPCAQGA EECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC DGQSSRASSPRSSRDCFQIR CCCCCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA