| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688818
Identifier: 116688818
GI number: 116688818
Start: 898827
End: 899306
Strand: Reverse
Name: 116688818
Synonym: Bcen2424_0795
Alternate gene names: NA
Gene position: 899306-898827 (Counterclockwise)
Preceding gene: 116688819
Following gene: 116688817
Centisome position: 25.81
GC content: 58.13
Gene sequence:
>480_bases ATGAAAGAGGTAGCGCCTTATGTCCTGACCGGCGCTCTGGCCGTGCAGGACGATTTGGAAGACGAGCAACTCGATCGCGT ATCCCGCCATCTAGGAGGTATCGCCACGGTGTATGCGAAGCACGACAAGATTGCCCACACTGTCGCACTGCGGATCTCGG GCACGCTGGTGCGTGACGACGTGCGCTATATCGAGCAACGCGTGGAGCGGTTTGCCGAGGAAAACGCCCGCGTCGCCGCG ATTCTCATTAGCGAATGGAATGGTGTGACGAGCGAGCTCGTTGTCGGTATGAACTGGGATGCACAATGTCTGCTCAGGCT CGGCGCTGCACAGGAACAGCTCGGGAAGCTCACGGAACAGTACTTCGACTTTTTGCTGCGTATCGAACCCCCAAGCTCCC CTGTCAACGGTAGTCCGCTCGTCCGTGTCGCGATCGAAGCACAAAACGATCGATGTTCGACGGATAGGTTCGCCCCCTAA
Upstream 100 bases:
>100_bases ATTCTCGAAAAGTTTCGGCCTACTGCGAGCTAGCGTACGGGCCCACCAACATTGGAGCGCCAACTGCAGCGGTATGGAAT CAAACCAACGGAGGTTCAGC
Downstream 100 bases:
>100_bases CTCAGTCTCCAGGCGTCGCGCCCCATTCAACGGACTGGTCAAAAAAGGCCATCTTTCATTGAACCGTTACATGTAACGCT GTATCCTTCGTTACATGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MKEVAPYVLTGALAVQDDLEDEQLDRVSRHLGGIATVYAKHDKIAHTVALRISGTLVRDDVRYIEQRVERFAEENARVAA ILISEWNGVTSELVVGMNWDAQCLLRLGAAQEQLGKLTEQYFDFLLRIEPPSSPVNGSPLVRVAIEAQNDRCSTDRFAP
Sequences:
>Translated_159_residues MKEVAPYVLTGALAVQDDLEDEQLDRVSRHLGGIATVYAKHDKIAHTVALRISGTLVRDDVRYIEQRVERFAEENARVAA ILISEWNGVTSELVVGMNWDAQCLLRLGAAQEQLGKLTEQYFDFLLRIEPPSSPVNGSPLVRVAIEAQNDRCSTDRFAP >Mature_159_residues MKEVAPYVLTGALAVQDDLEDEQLDRVSRHLGGIATVYAKHDKIAHTVALRISGTLVRDDVRYIEQRVERFAEENARVAA ILISEWNGVTSELVVGMNWDAQCLLRLGAAQEQLGKLTEQYFDFLLRIEPPSSPVNGSPLVRVAIEAQNDRCSTDRFAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17719; Mature: 17719
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEVAPYVLTGALAVQDDLEDEQLDRVSRHLGGIATVYAKHDKIAHTVALRISGTLVRDD CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHEEEEEECCCHHHHH VRYIEQRVERFAEENARVAAILISEWNGVTSELVVGMNWDAQCLLRLGAAQEQLGKLTEQ HHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHEEECCCCCHHHHHHHCCHHHHHHHHHHH YFDFLLRIEPPSSPVNGSPLVRVAIEAQNDRCSTDRFAP HHHHEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MKEVAPYVLTGALAVQDDLEDEQLDRVSRHLGGIATVYAKHDKIAHTVALRISGTLVRDD CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHEEEEEECCCHHHHH VRYIEQRVERFAEENARVAAILISEWNGVTSELVVGMNWDAQCLLRLGAAQEQLGKLTEQ HHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHEEECCCCCHHHHHHHCCHHHHHHHHHHH YFDFLLRIEPPSSPVNGSPLVRVAIEAQNDRCSTDRFAP HHHHEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA