| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688815
Identifier: 116688815
GI number: 116688815
Start: 897337
End: 897861
Strand: Reverse
Name: 116688815
Synonym: Bcen2424_0792
Alternate gene names: NA
Gene position: 897861-897337 (Counterclockwise)
Preceding gene: 116688816
Following gene: 116688814
Centisome position: 25.77
GC content: 57.9
Gene sequence:
>525_bases ATGAGCAAACCAGCCCGAGCCAGACTAAGTGTTGAACTCGGCCCGCTAAAGCGGGAGTGGGACGCATATTGTGCACAGCG TGGCCTAACACCCAGCGAGGGTTTGCGGCAGTTCGTTGCGAAGGTCATTGCAAACACTACAAATCAACCGCAGCCACATC AGCCCCTACCGCCACGACAAGGCCCATGCAAACAAATTGGGATCGCGTTGACCCACGCCGAGCTCGCACGCGTAAGAAGT GCGGCCTATCTTGACGGCTTCACGGCAAATCGATGGATTGTGGCACTGATCCGCGCATACCTGACGGACGAACCGCAGCT GGGTAACCGAGAATTGACGCTTCTCGCCGAATCAAACCAACAGCTCGCGGTAATTCGGAGGCAGCTGGGCGAGCTTGCAA GACACGTCAACGCAACCGGGTGTATAGACGGGCTCGATGGAGAGCAAATCCGTGCAACGATCGACGCCCATCTACGTACC GTGGCGAAGCTGCTGCGCAGAAACCTCGATCGCTGGAGCCGGTGA
Upstream 100 bases:
>100_bases CATCTGCGTGCCTTGTAAGGTCGGGTAAGCGACGCGCTTGCAATGCGTCGTTACCGTCGTCGCTATCCGCGCACCACACC GCTTCCAACATGCGCCGAAC
Downstream 100 bases:
>100_bases TATGTCTTTTCCGAGAGTCTACGTCGACGAACTTTTGCTCAACTGGGGAGATCGCCTGTTTCACGATCCCCTACGGCATG TTCAGCCGCCGCGCCTTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Mobilisation Protein; Mobilization Protein
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MSKPARARLSVELGPLKREWDAYCAQRGLTPSEGLRQFVAKVIANTTNQPQPHQPLPPRQGPCKQIGIALTHAELARVRS AAYLDGFTANRWIVALIRAYLTDEPQLGNRELTLLAESNQQLAVIRRQLGELARHVNATGCIDGLDGEQIRATIDAHLRT VAKLLRRNLDRWSR
Sequences:
>Translated_174_residues MSKPARARLSVELGPLKREWDAYCAQRGLTPSEGLRQFVAKVIANTTNQPQPHQPLPPRQGPCKQIGIALTHAELARVRS AAYLDGFTANRWIVALIRAYLTDEPQLGNRELTLLAESNQQLAVIRRQLGELARHVNATGCIDGLDGEQIRATIDAHLRT VAKLLRRNLDRWSR >Mature_173_residues SKPARARLSVELGPLKREWDAYCAQRGLTPSEGLRQFVAKVIANTTNQPQPHQPLPPRQGPCKQIGIALTHAELARVRSA AYLDGFTANRWIVALIRAYLTDEPQLGNRELTLLAESNQQLAVIRRQLGELARHVNATGCIDGLDGEQIRATIDAHLRTV AKLLRRNLDRWSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19458; Mature: 19326
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPARARLSVELGPLKREWDAYCAQRGLTPSEGLRQFVAKVIANTTNQPQPHQPLPPRQ CCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GPCKQIGIALTHAELARVRSAAYLDGFTANRWIVALIRAYLTDEPQLGNRELTLLAESNQ CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC QLAVIRRQLGELARHVNATGCIDGLDGEQIRATIDAHLRTVAKLLRRNLDRWSR HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SKPARARLSVELGPLKREWDAYCAQRGLTPSEGLRQFVAKVIANTTNQPQPHQPLPPRQ CCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GPCKQIGIALTHAELARVRSAAYLDGFTANRWIVALIRAYLTDEPQLGNRELTLLAESNQ CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC QLAVIRRQLGELARHVNATGCIDGLDGEQIRATIDAHLRTVAKLLRRNLDRWSR HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA