| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688774
Identifier: 116688774
GI number: 116688774
Start: 840963
End: 841406
Strand: Direct
Name: 116688774
Synonym: Bcen2424_0751
Alternate gene names: NA
Gene position: 840963-841406 (Clockwise)
Preceding gene: 116688773
Following gene: 116688775
Centisome position: 24.14
GC content: 71.17
Gene sequence:
>444_bases ATGGTGCCCGCCGGCGTCGATCCGGCCGCGTTCGACACGTTCGACATGCAGGCGCTCGACGCCGGCACGTTCGACGCGAC CATCGACGGCGCGGGCGATGCGCTGGCCGTGGTGTTCTTCTGGGGCGTCGACTGCTTCAACTGCGAGATCGCGAAGAAGG CGATGCTCGCCCAGCCCGATGCCATCCGCGCGCTGGGCCTGAAGTGGTTCCATTGCAACGTGTACGAACACCATGAACTG GGGCGCCGCTTCGGGCTGCACGGCGTGCCGACGTGGTTCTTCTTCCACCGCGGCAAGCGGCTGGGGCGCGCGACCGGCTG GCACGGCCTCGCGCAGTTCCAGGCAGCCGTCGCGGCGGCGCGCGGGAAGATCGCCGCGGCGGCCGATGCACCGGCCGACG AGCGCACCGGCGGCCCGCACGATCCGCTAGCCGGCGGCGATTGA
Upstream 100 bases:
>100_bases AACACCGTCGTCTCGGTGCTGCAAAAGGGCTATACGATCGCCGACCGCGTGCTGCGCCCGGCGCTCGTCACCGTCGCCCA GCCGAAGTAAGGCGGCCGAC
Downstream 100 bases:
>100_bases AAAAATTTAATATCCGCATCGCTCGTCGGGTCTTGAAAACGGATCGGGCGGACGCATTTCGGGAACAGAGTTGAATTCTG GCGTGCGAAATCGCCCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Thioredoxin; Thioredoxin Family Protein; Thiol-Disulfide Isomerase And Thioredoxin; Thioredoxin Family
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MVPAGVDPAAFDTFDMQALDAGTFDATIDGAGDALAVVFFWGVDCFNCEIAKKAMLAQPDAIRALGLKWFHCNVYEHHEL GRRFGLHGVPTWFFFHRGKRLGRATGWHGLAQFQAAVAAARGKIAAAADAPADERTGGPHDPLAGGD
Sequences:
>Translated_147_residues MVPAGVDPAAFDTFDMQALDAGTFDATIDGAGDALAVVFFWGVDCFNCEIAKKAMLAQPDAIRALGLKWFHCNVYEHHEL GRRFGLHGVPTWFFFHRGKRLGRATGWHGLAQFQAAVAAARGKIAAAADAPADERTGGPHDPLAGGD >Mature_147_residues MVPAGVDPAAFDTFDMQALDAGTFDATIDGAGDALAVVFFWGVDCFNCEIAKKAMLAQPDAIRALGLKWFHCNVYEHHEL GRRFGLHGVPTWFFFHRGKRLGRATGWHGLAQFQAAVAAARGKIAAAADAPADERTGGPHDPLAGGD
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15680; Mature: 15680
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPAGVDPAAFDTFDMQALDAGTFDATIDGAGDALAVVFFWGVDCFNCEIAKKAMLAQPD CCCCCCCCCCCCCCCHHHHCCCCCCEEECCCCCCEEEHHHHCCCCCCHHHHHHHHHCCCH AIRALGLKWFHCNVYEHHELGRRFGLHGVPTWFFFHRGKRLGRATGWHGLAQFQAAVAAA HHHHHCEEEEEECCHHHHHHHHHCCCCCCCHHHHHHHCCHHCCCCCCHHHHHHHHHHHHH RGKIAAAADAPADERTGGPHDPLAGGD CCCEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVPAGVDPAAFDTFDMQALDAGTFDATIDGAGDALAVVFFWGVDCFNCEIAKKAMLAQPD CCCCCCCCCCCCCCCHHHHCCCCCCEEECCCCCCEEEHHHHCCCCCCHHHHHHHHHCCCH AIRALGLKWFHCNVYEHHELGRRFGLHGVPTWFFFHRGKRLGRATGWHGLAQFQAAVAAA HHHHHCEEEEEECCHHHHHHHHHCCCCCCCHHHHHHHCCHHCCCCCCHHHHHHHHHHHHH RGKIAAAADAPADERTGGPHDPLAGGD CCCEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA