Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116688771

Identifier: 116688771

GI number: 116688771

Start: 839893

End: 840054

Strand: Reverse

Name: 116688771

Synonym: Bcen2424_0748

Alternate gene names: NA

Gene position: 840054-839893 (Counterclockwise)

Preceding gene: 116688772

Following gene: 116688767

Centisome position: 24.11

GC content: 59.26

Gene sequence:

>162_bases
GTGAAACTGACCTTTGCGATATCGGTGGTCGCGCTGGTACTCATTGCCGGCACCACCACCATCTGCCTGTCGGGAGCCGT
CACCGATCGCACGACCGAATACGGAAGCGCGCGGGCGACGTTCGACCAGATGTTCAGCTCCCACCAGAAAATCTGTCGAT
GA

Upstream 100 bases:

>100_bases
TACACTCCATTCAAGCGTCGGAAAGCGTGTTTACCCTGAGCTGACCGTCGCCTGACATCCACCTGGCGCCGTTTTCACCC
TTGTTCTCGAGGGGAGTACC

Downstream 100 bases:

>100_bases
TGCGCCGGTCGCGCTTCGTCGGCCGGCCGTGCAGTTCGGCCGCCGGCTCGCGATACGTGCGGCGACGCTCCAGTTCGGCG
AGCCGCGCGGCCCGCCCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 53; Mature: 53

Protein sequence:

>53_residues
MKLTFAISVVALVLIAGTTTICLSGAVTDRTTEYGSARATFDQMFSSHQKICR

Sequences:

>Translated_53_residues
MKLTFAISVVALVLIAGTTTICLSGAVTDRTTEYGSARATFDQMFSSHQKICR
>Mature_53_residues
MKLTFAISVVALVLIAGTTTICLSGAVTDRTTEYGSARATFDQMFSSHQKICR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5713; Mature: 5713

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTFAISVVALVLIAGTTTICLSGAVTDRTTEYGSARATFDQMFSSHQKICR
CCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLTFAISVVALVLIAGTTTICLSGAVTDRTTEYGSARATFDQMFSSHQKICR
CCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA