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The map label for this gene is glcD [H]

Identifier: 116688758

GI number: 116688758

Start: 819710

End: 821119

Strand: Reverse

Name: glcD [H]

Synonym: Bcen2424_0735

Alternate gene names: 116688758

Gene position: 821119-819710 (Counterclockwise)

Preceding gene: 116688761

Following gene: 116688757

Centisome position: 23.57

GC content: 69.15

Gene sequence:

>1410_bases
GTGAATCACCCTGCCCCGCCGGCCGCCACGCGCCGCCCGCTGCCCCCCGCCATGCTCGATGCGCTGCGCGCCGCCTTCGG
CGAGCGCGTGTCGACCGCCGACGCGGTCCGCGCCCATCACGGCCGCGACGAATCCCCGTTCGATCCGCAACTGCCCGACG
CCGTCGTGTTCGCGCGCAGCACCGACGACGTGCGCGAAGTCGTGTCGCTGTGTTCGCTCTACAGCGTGCCGCTGATCCCG
TACGGCGCCGGCTCGTCGCTCGAAGGTCACCTGCTCGCGGTGCGCGGCGGCGTGTCGCTCGATTTGTCGGAAATGAACCG
CGTGCTGTCGATCAACGCCGAGGACCTGACCGTGACGGTCGAGCCCGGCATCACGCGCAAGGCGCTCAACGAAGCGCTGC
GCGACACCGGCCTGTTCTTCCCCATCGATCCGGGCGCCGACGCCAGCATTGGCGGGATGACGGCCACGCGTGCATCGGGC
ACCAACGCCGTCCGCTACGGCACGATGCGCGAGAACGTGCTCGGCCTGACCGCGGTGCTCGCGGACGGCCGCGTGGTCAA
AACCGGTTCCCGCGCGCGCAAGTCGTCGGCCGGCTACGACCTCACGCGGCTGTTCGTCGGGTCCGAAGGCACGCTCGGCG
TGATCACCGAAATCACGCTGCGCCTGCACCCGCTGCCCGAAGCCGTGTCGGCCGCGATCTGCACGTTCCCGACGATGGGC
GACGCGGTGCGCACGGTGATCGAGACGATCCAGATCGGCGTGCCGATCGCGCGCGTCGAATTCGTCGATGCGCTCGCGGT
ACGCTCGATCAACCGCCACTCGAACCTGACGCTGACCGAAGCGCCGACGCTGTTCTTCGAATTCCACGGCACCGAGGCCG
GCGTGAAGGAACAGGCCGAACTCGTGCAGGCGCTCGCCGGCCAGAACGCCGGCCAGGGCTTCGAATGGGCGACCCGCCCC
GAGGATCGCACGCGGCTCTGGTCCGCGCGCCACAACGCGTACTTCGCGATGCTGCAGCTGAAGCCCGGCTGCCGCGCGGT
GACGACCGACGTGTGCGTACCGATCTCGCAGCTCGCCGCGTGCGTCGAGGAAACCGAGGTCGACCTGCGCGCGTCGTCGC
TGCCCTGCCCGATCGTCGGCCACGTCGGCGACGGCAATTTCCACGTCGCGATCCTGATCGATCCCGACAAGCCCGAGGAA
CTCGCCGAAGCCGAGCACATCAACGACCGGATCGTCGAGCGCGCGCTGCGGCTGGGCGGTACCTGCACGGGCGAGCACGG
CATCGGGCTGCACAAGATGCGCTTCCTGCCGAAGGAGCACGGCGACAACGCGATCGACACGATGCGCGCGATCAAGCTCG
CGCTCGATCCGCGCAACCTGATGAATCCAGGCAAGATTTTCACGTGCTGA

Upstream 100 bases:

>100_bases
GGTTGGCTGGAACGCGATTATCGCAGCCTGCGGCGGGAGGCGCAGCGGACGTTACGGCGTAGAATGGGCCGACAGTTCGA
CAAGCAGTCAGGAGACATTC

Downstream 100 bases:

>100_bases
CCCGGCGGCGCGAGCTCGCGCCGCACGCAGGAGACCTCATGAACGCTCCCGTCGAACTGTCGAGCGCCGCACGCGCGCAG
CGTCAGCGCGAAGTCGTGCA

Product: FAD linked oxidase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MNHPAPPAATRRPLPPAMLDALRAAFGERVSTADAVRAHHGRDESPFDPQLPDAVVFARSTDDVREVVSLCSLYSVPLIP
YGAGSSLEGHLLAVRGGVSLDLSEMNRVLSINAEDLTVTVEPGITRKALNEALRDTGLFFPIDPGADASIGGMTATRASG
TNAVRYGTMRENVLGLTAVLADGRVVKTGSRARKSSAGYDLTRLFVGSEGTLGVITEITLRLHPLPEAVSAAICTFPTMG
DAVRTVIETIQIGVPIARVEFVDALAVRSINRHSNLTLTEAPTLFFEFHGTEAGVKEQAELVQALAGQNAGQGFEWATRP
EDRTRLWSARHNAYFAMLQLKPGCRAVTTDVCVPISQLAACVEETEVDLRASSLPCPIVGHVGDGNFHVAILIDPDKPEE
LAEAEHINDRIVERALRLGGTCTGEHGIGLHKMRFLPKEHGDNAIDTMRAIKLALDPRNLMNPGKIFTC

Sequences:

>Translated_469_residues
MNHPAPPAATRRPLPPAMLDALRAAFGERVSTADAVRAHHGRDESPFDPQLPDAVVFARSTDDVREVVSLCSLYSVPLIP
YGAGSSLEGHLLAVRGGVSLDLSEMNRVLSINAEDLTVTVEPGITRKALNEALRDTGLFFPIDPGADASIGGMTATRASG
TNAVRYGTMRENVLGLTAVLADGRVVKTGSRARKSSAGYDLTRLFVGSEGTLGVITEITLRLHPLPEAVSAAICTFPTMG
DAVRTVIETIQIGVPIARVEFVDALAVRSINRHSNLTLTEAPTLFFEFHGTEAGVKEQAELVQALAGQNAGQGFEWATRP
EDRTRLWSARHNAYFAMLQLKPGCRAVTTDVCVPISQLAACVEETEVDLRASSLPCPIVGHVGDGNFHVAILIDPDKPEE
LAEAEHINDRIVERALRLGGTCTGEHGIGLHKMRFLPKEHGDNAIDTMRAIKLALDPRNLMNPGKIFTC
>Mature_469_residues
MNHPAPPAATRRPLPPAMLDALRAAFGERVSTADAVRAHHGRDESPFDPQLPDAVVFARSTDDVREVVSLCSLYSVPLIP
YGAGSSLEGHLLAVRGGVSLDLSEMNRVLSINAEDLTVTVEPGITRKALNEALRDTGLFFPIDPGADASIGGMTATRASG
TNAVRYGTMRENVLGLTAVLADGRVVKTGSRARKSSAGYDLTRLFVGSEGTLGVITEITLRLHPLPEAVSAAICTFPTMG
DAVRTVIETIQIGVPIARVEFVDALAVRSINRHSNLTLTEAPTLFFEFHGTEAGVKEQAELVQALAGQNAGQGFEWATRP
EDRTRLWSARHNAYFAMLQLKPGCRAVTTDVCVPISQLAACVEETEVDLRASSLPCPIVGHVGDGNFHVAILIDPDKPEE
LAEAEHINDRIVERALRLGGTCTGEHGIGLHKMRFLPKEHGDNAIDTMRAIKLALDPRNLMNPGKIFTC

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI37595756, Length=454, Percent_Identity=53.0837004405286, Blast_Score=495, Evalue=1e-140,
Organism=Homo sapiens, GI37595754, Length=477, Percent_Identity=50.5241090146751, Blast_Score=485, Evalue=1e-137,
Organism=Homo sapiens, GI119964728, Length=419, Percent_Identity=29.3556085918854, Blast_Score=169, Evalue=4e-42,
Organism=Homo sapiens, GI4501993, Length=220, Percent_Identity=32.2727272727273, Blast_Score=119, Evalue=7e-27,
Organism=Escherichia coli, GI1789351, Length=423, Percent_Identity=31.6784869976359, Blast_Score=210, Evalue=1e-55,
Organism=Escherichia coli, GI1787977, Length=522, Percent_Identity=28.9272030651341, Blast_Score=153, Evalue=3e-38,
Organism=Escherichia coli, GI48994907, Length=218, Percent_Identity=32.5688073394495, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI48994914, Length=176, Percent_Identity=31.25, Blast_Score=83, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71992373, Length=464, Percent_Identity=45.2586206896552, Blast_Score=426, Evalue=1e-119,
Organism=Caenorhabditis elegans, GI71992381, Length=464, Percent_Identity=44.1810344827586, Blast_Score=407, Evalue=1e-114,
Organism=Caenorhabditis elegans, GI71992392, Length=381, Percent_Identity=48.8188976377953, Blast_Score=384, Evalue=1e-107,
Organism=Caenorhabditis elegans, GI17534361, Length=431, Percent_Identity=26.6821345707657, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17556096, Length=456, Percent_Identity=25.8771929824561, Blast_Score=114, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6320027, Length=453, Percent_Identity=40.6181015452539, Blast_Score=339, Evalue=7e-94,
Organism=Saccharomyces cerevisiae, GI6320764, Length=443, Percent_Identity=27.765237020316, Blast_Score=149, Evalue=1e-36,
Organism=Saccharomyces cerevisiae, GI6320023, Length=468, Percent_Identity=24.1452991452991, Blast_Score=147, Evalue=3e-36,
Organism=Drosophila melanogaster, GI18921117, Length=424, Percent_Identity=27.3584905660377, Blast_Score=155, Evalue=5e-38,
Organism=Drosophila melanogaster, GI24639277, Length=424, Percent_Identity=27.3584905660377, Blast_Score=155, Evalue=5e-38,
Organism=Drosophila melanogaster, GI24639275, Length=424, Percent_Identity=27.3584905660377, Blast_Score=155, Evalue=5e-38,
Organism=Drosophila melanogaster, GI24653753, Length=492, Percent_Identity=27.4390243902439, Blast_Score=132, Evalue=7e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 50350; Mature: 50350

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHPAPPAATRRPLPPAMLDALRAAFGERVSTADAVRAHHGRDESPFDPQLPDAVVFARS
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECC
TDDVREVVSLCSLYSVPLIPYGAGSSLEGHLLAVRGGVSLDLSEMNRVLSINAEDLTVTV
CHHHHHHHHHHHHHCCCCEECCCCCCCCCEEEEEECCCEEEHHHCCCEEEECCCCEEEEE
EPGITRKALNEALRDTGLFFPIDPGADASIGGMTATRASGTNAVRYGTMRENVLGLTAVL
CCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCEEECCCCCCEEEECCHHHHHHHHEEEC
ADGRVVKTGSRARKSSAGYDLTRLFVGSEGTLGVITEITLRLHPLPEAVSAAICTFPTMG
CCCEEEECCCHHHHCCCCCCEEEEEECCCCCEEEEEEEEEEECCCHHHHHHHHHCCCCCC
DAVRTVIETIQIGVPIARVEFVDALAVRSINRHSNLTLTEAPTLFFEFHGTEAGVKEQAE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCHHHHHH
LVQALAGQNAGQGFEWATRPEDRTRLWSARHNAYFAMLQLKPGCRAVTTDVCVPISQLAA
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCEEHHHHHHHHHHHHH
CVEETEVDLRASSLPCPIVGHVGDGNFHVAILIDPDKPEELAEAEHINDRIVERALRLGG
HHHHHHCCEECCCCCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC
TCTGEHGIGLHKMRFLPKEHGDNAIDTMRAIKLALDPRNLMNPGKIFTC
CCCCCCCCCHHHHHCCCHHCCCHHHHHHHHHHHEECCHHHCCCCCEEEC
>Mature Secondary Structure
MNHPAPPAATRRPLPPAMLDALRAAFGERVSTADAVRAHHGRDESPFDPQLPDAVVFARS
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECC
TDDVREVVSLCSLYSVPLIPYGAGSSLEGHLLAVRGGVSLDLSEMNRVLSINAEDLTVTV
CHHHHHHHHHHHHHCCCCEECCCCCCCCCEEEEEECCCEEEHHHCCCEEEECCCCEEEEE
EPGITRKALNEALRDTGLFFPIDPGADASIGGMTATRASGTNAVRYGTMRENVLGLTAVL
CCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCEEECCCCCCEEEECCHHHHHHHHEEEC
ADGRVVKTGSRARKSSAGYDLTRLFVGSEGTLGVITEITLRLHPLPEAVSAAICTFPTMG
CCCEEEECCCHHHHCCCCCCEEEEEECCCCCEEEEEEEEEEECCCHHHHHHHHHCCCCCC
DAVRTVIETIQIGVPIARVEFVDALAVRSINRHSNLTLTEAPTLFFEFHGTEAGVKEQAE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCHHHHHH
LVQALAGQNAGQGFEWATRPEDRTRLWSARHNAYFAMLQLKPGCRAVTTDVCVPISQLAA
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCEEHHHHHHHHHHHHH
CVEETEVDLRASSLPCPIVGHVGDGNFHVAILIDPDKPEELAEAEHINDRIVERALRLGG
HHHHHHCCEECCCCCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC
TCTGEHGIGLHKMRFLPKEHGDNAIDTMRAIKLALDPRNLMNPGKIFTC
CCCCCCCCCHHHHHCCCHHCCCHHHHHHHHHHHEECCHHHCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]