| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is tgt [H]
Identifier: 116688745
GI number: 116688745
Start: 803089
End: 804276
Strand: Reverse
Name: tgt [H]
Synonym: Bcen2424_0722
Alternate gene names: 116688745
Gene position: 804276-803089 (Counterclockwise)
Preceding gene: 116688746
Following gene: 116688744
Centisome position: 23.09
GC content: 65.49
Gene sequence:
>1188_bases ATGACCGAAGGTTCATCCCACGATACGCACGCCCCCGTGCAGGACCGCCCGGCCAACGGGCTCGAATTCGAATTGCTGAC GACCGACGGCCACGCGCGCCGCGGCCGCGTGAAGCTCAATCACGGCACGGTCGAGACACCGATCTTCATGCCGGTCGGCA CGTACGGCACCGTGAAGGCGATCCAGCCGCGCGAGCTGCACGAGATCAAGGCCCAGATCATCCTCGGCAACACGTTCCAC CTGTGGCTGCGCCCGGGCCTCGACACGATCGACGCGCACGGCGGCCTGCACGGCTTCATGGGCTGGAACAAGCCGATCCT GACCGATTCGGGTGGCTTCCAGGTGTTCTCGCTCGGCGACCTGCGCAAGATCACCGAGGACGGCGTCACGTTCGCGTCGC CGATCAACGGCGACAAGCTGTTCCTGTCGCCGGAAGTGTCGATGCAGATCCAGAAGGTGCTGAACTCCGACGTCGTGATG CAGTTCGACGAGTGCACGCCGTACGCGACCAACGGCGTGCCGACGACGCACCAGGAAGCGGCCGACTCGATGCGCATGTC GCTGCGCTGGGCGAAGCGCTCGCTCGACGAATTCCACCGGCTCGGCAACCCGAATGCGCTGTTCGGGATCGTCCAGGGCG GGATGTTCGAGGACCTGCGCGACGAATCGCTCGCGGGCCTCGCGGAACTCGGCTTCCACGGCCTCGCGATCGGCGGGCTG TCGGTGGGCGAGCCGAAGGAAGACATGATGCGCGTGCTGCAGCACGTGGGCCCGAAGCTGCCGGCCAACAAGCCGCACTA CCTGATGGGCGTGGGCACGCCGGAGGATCTGGTCGAGGGCGTCGCGAACGGCATCGACATGTTCGACTGCGTGATGCCGA CCCGCAACGCGCGCAACGGGTGGCTCTTCACGCGCTTCGGCGACGTGAAGATCCGCAACGCGACGCACAAGAACTCGTTG AAGCCGCTCGATTCGACCTGCACCTGCTACACGTGCCAGAACTTCTCGCGCGGCTACCTGCATCACCTGCACCGGGTCGG CGAAATCCTCGGCGCGCAGCTGAACACGATCCACAACCTGCACTACTACCTGCAGCTGATGAGCGAGATCCGCGACGCGA TCGAAACGCATACGTTCGACGCATTCCGGCAGCGCTTCGCGGAGGATCGCGCCAGAGGGGTCGACTGA
Upstream 100 bases:
>100_bases CGCTACGCTGGCGCGCACCCGCTTTTCCCCGCCGCCGATTTCCCGGGCGGCGTTTCCAACATGCGCCGGACTGTTTTCCG GTAGCAAGGAGAGCAACACG
Downstream 100 bases:
>100_bases CGGGCCGGCCGGCGGCCCGCACCGCGGCCAGTCACATAGGACGCGTACTAATTGGCACACTCAAATCGCCAGTCGCGACC GCCAAACATTACAATTACCT
Product: queuine tRNA-ribosyltransferase
Products: NA
Alternate protein names: Guanine insertion enzyme; tRNA-guanine transglycosylase [H]
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MTEGSSHDTHAPVQDRPANGLEFELLTTDGHARRGRVKLNHGTVETPIFMPVGTYGTVKAIQPRELHEIKAQIILGNTFH LWLRPGLDTIDAHGGLHGFMGWNKPILTDSGGFQVFSLGDLRKITEDGVTFASPINGDKLFLSPEVSMQIQKVLNSDVVM QFDECTPYATNGVPTTHQEAADSMRMSLRWAKRSLDEFHRLGNPNALFGIVQGGMFEDLRDESLAGLAELGFHGLAIGGL SVGEPKEDMMRVLQHVGPKLPANKPHYLMGVGTPEDLVEGVANGIDMFDCVMPTRNARNGWLFTRFGDVKIRNATHKNSL KPLDSTCTCYTCQNFSRGYLHHLHRVGEILGAQLNTIHNLHYYLQLMSEIRDAIETHTFDAFRQRFAEDRARGVD
Sequences:
>Translated_395_residues MTEGSSHDTHAPVQDRPANGLEFELLTTDGHARRGRVKLNHGTVETPIFMPVGTYGTVKAIQPRELHEIKAQIILGNTFH LWLRPGLDTIDAHGGLHGFMGWNKPILTDSGGFQVFSLGDLRKITEDGVTFASPINGDKLFLSPEVSMQIQKVLNSDVVM QFDECTPYATNGVPTTHQEAADSMRMSLRWAKRSLDEFHRLGNPNALFGIVQGGMFEDLRDESLAGLAELGFHGLAIGGL SVGEPKEDMMRVLQHVGPKLPANKPHYLMGVGTPEDLVEGVANGIDMFDCVMPTRNARNGWLFTRFGDVKIRNATHKNSL KPLDSTCTCYTCQNFSRGYLHHLHRVGEILGAQLNTIHNLHYYLQLMSEIRDAIETHTFDAFRQRFAEDRARGVD >Mature_394_residues TEGSSHDTHAPVQDRPANGLEFELLTTDGHARRGRVKLNHGTVETPIFMPVGTYGTVKAIQPRELHEIKAQIILGNTFHL WLRPGLDTIDAHGGLHGFMGWNKPILTDSGGFQVFSLGDLRKITEDGVTFASPINGDKLFLSPEVSMQIQKVLNSDVVMQ FDECTPYATNGVPTTHQEAADSMRMSLRWAKRSLDEFHRLGNPNALFGIVQGGMFEDLRDESLAGLAELGFHGLAIGGLS VGEPKEDMMRVLQHVGPKLPANKPHYLMGVGTPEDLVEGVANGIDMFDCVMPTRNARNGWLFTRFGDVKIRNATHKNSLK PLDSTCTCYTCQNFSRGYLHHLHRVGEILGAQLNTIHNLHYYLQLMSEIRDAIETHTFDAFRQRFAEDRARGVD
Specific function: Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hyper
COG id: COG0343
COG function: function code J; Queuine/archaeosine tRNA-ribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the queuine tRNA-ribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI13654276, Length=356, Percent_Identity=44.3820224719101, Blast_Score=296, Evalue=2e-80, Organism=Escherichia coli, GI1786607, Length=374, Percent_Identity=64.1711229946524, Blast_Score=494, Evalue=1e-141, Organism=Caenorhabditis elegans, GI17544680, Length=371, Percent_Identity=42.0485175202156, Blast_Score=290, Evalue=1e-78, Organism=Caenorhabditis elegans, GI25146502, Length=164, Percent_Identity=29.2682926829268, Blast_Score=75, Evalue=8e-14, Organism=Drosophila melanogaster, GI19920510, Length=355, Percent_Identity=44.5070422535211, Blast_Score=308, Evalue=5e-84, Organism=Drosophila melanogaster, GI21355311, Length=166, Percent_Identity=29.5180722891566, Blast_Score=84, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004803 - InterPro: IPR002616 [H]
Pfam domain/function: PF01702 TGT [H]
EC number: =2.4.2.29 [H]
Molecular weight: Translated: 43940; Mature: 43808
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEGSSHDTHAPVQDRPANGLEFELLTTDGHARRGRVKLNHGTVETPIFMPVGTYGTVKA CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCEEEECCCCCCEEC IQPRELHEIKAQIILGNTFHLWLRPGLDTIDAHGGLHGFMGWNKPILTDSGGFQVFSLGD CCCHHHHHHEEEEEECCEEEEEEECCCCCCCCCCCCEECCCCCCCEEECCCCEEEEECCH LRKITEDGVTFASPINGDKLFLSPEVSMQIQKVLNSDVVMQFDECTPYATNGVPTTHQEA HHHHHHCCCEEECCCCCCEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHH ADSMRMSLRWAKRSLDEFHRLGNPNALFGIVQGGMFEDLRDESLAGLAELGFHGLAIGGL HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEECCC SVGEPKEDMMRVLQHVGPKLPANKPHYLMGVGTPEDLVEGVANGIDMFDCVMPTRNARNG CCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCHHHHHCCCCCCCCC WLFTRFGDVKIRNATHKNSLKPLDSTCTCYTCQNFSRGYLHHLHRVGEILGAQLNTIHNL EEEEEECCEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH HYYLQLMSEIRDAIETHTFDAFRQRFAEDRARGVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TEGSSHDTHAPVQDRPANGLEFELLTTDGHARRGRVKLNHGTVETPIFMPVGTYGTVKA CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCEEEECCCCCCEEC IQPRELHEIKAQIILGNTFHLWLRPGLDTIDAHGGLHGFMGWNKPILTDSGGFQVFSLGD CCCHHHHHHEEEEEECCEEEEEEECCCCCCCCCCCCEECCCCCCCEEECCCCEEEEECCH LRKITEDGVTFASPINGDKLFLSPEVSMQIQKVLNSDVVMQFDECTPYATNGVPTTHQEA HHHHHHCCCEEECCCCCCEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHH ADSMRMSLRWAKRSLDEFHRLGNPNALFGIVQGGMFEDLRDESLAGLAELGFHGLAIGGL HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEECCC SVGEPKEDMMRVLQHVGPKLPANKPHYLMGVGTPEDLVEGVANGIDMFDCVMPTRNARNG CCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCHHHHHCCCCCCCCC WLFTRFGDVKIRNATHKNSLKPLDSTCTCYTCQNFSRGYLHHLHRVGEILGAQLNTIHNL EEEEEECCEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH HYYLQLMSEIRDAIETHTFDAFRQRFAEDRARGVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA