Click here to switch to the map view.

The map label for this gene is ruvA [H]

Identifier: 116688712

GI number: 116688712

Start: 768151

End: 768732

Strand: Reverse

Name: ruvA [H]

Synonym: Bcen2424_0689

Alternate gene names: 116688712

Gene position: 768732-768151 (Counterclockwise)

Preceding gene: 116688713

Following gene: 116688711

Centisome position: 22.07

GC content: 67.87

Gene sequence:

>582_bases
ATGATCGGTCGCATCGCCGGCATCCTGCTCGAAAAGAACCCGCCTCATCTGCTCGTCGACTGCAACGGCGTCGGCTACGA
AATCGACGTGCCGATGAGCACCTTCTACAACCTGCCGCAAACGGGCGAGCGTGTCGTGCTGCTCACGCAGCAGATCGTCC
GCGAGGACGCGCACCTGCTGTACGGCTTCCTGACGCCGCAGGAGCGCACGACCTTCCGCGAGCTGCTGAAGATCACCGGC
ATCGGCGCGCGCATGGCGCTCGCCGTGCTGTCCGGCATGAGCGTGCAGGAGCTCGCGCAGGCCGTGACGATGCAGGATGC
CGCCCGCCTCACGCGCCTGCCCGGCATCGGCAAGAAGACCGCCGAGCGCCTGCTGCTCGAACTGAAGGGCAAGCTCGGCG
CCGACCTCGGCGCACTGGCCGGCGCCGCGTCGGCGTCCGACCACGCGACCGACATCCTCAACGCGCTGCTCGCGCTCGGC
TACTCCGAAAAGGAAGGCCTCGCCGCGATCAAGAACGTGCCGGCCGGCACCGGCGTGTCCGAAGGCATCAAGCTCGCGCT
GAAGGCGCTGTCGAAGGCGTAA

Upstream 100 bases:

>100_bases
ATACCCGCGACACGCGCCGCTTCGGCCTGACGGCCGCGCCCATCGGCATTGCGCCGCGCGTGCGCTACACTCGCGCTTTC
TTCCTCGCATCCCGTCCTCC

Downstream 100 bases:

>100_bases
CGCACGTTCGATCCGGCCGTCGAAGCCAGTGTCGCGCCGCCGCGCGGCGCTCGCCAGTCGGCCGTTCGGCCAGGTGGTCC
CGCCTGCGCCGCGCGGTACA

Product: Holliday junction DNA helicase RuvA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MIGRIAGILLEKNPPHLLVDCNGVGYEIDVPMSTFYNLPQTGERVVLLTQQIVREDAHLLYGFLTPQERTTFRELLKITG
IGARMALAVLSGMSVQELAQAVTMQDAARLTRLPGIGKKTAERLLLELKGKLGADLGALAGAASASDHATDILNALLALG
YSEKEGLAAIKNVPAGTGVSEGIKLALKALSKA

Sequences:

>Translated_193_residues
MIGRIAGILLEKNPPHLLVDCNGVGYEIDVPMSTFYNLPQTGERVVLLTQQIVREDAHLLYGFLTPQERTTFRELLKITG
IGARMALAVLSGMSVQELAQAVTMQDAARLTRLPGIGKKTAERLLLELKGKLGADLGALAGAASASDHATDILNALLALG
YSEKEGLAAIKNVPAGTGVSEGIKLALKALSKA
>Mature_193_residues
MIGRIAGILLEKNPPHLLVDCNGVGYEIDVPMSTFYNLPQTGERVVLLTQQIVREDAHLLYGFLTPQERTTFRELLKITG
IGARMALAVLSGMSVQELAQAVTMQDAARLTRLPGIGKKTAERLLLELKGKLGADLGALAGAASASDHATDILNALLALG
YSEKEGLAAIKNVPAGTGVSEGIKLALKALSKA

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG0632

COG function: function code L; Holliday junction resolvasome, DNA-binding subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvA family [H]

Homologues:

Organism=Escherichia coli, GI1788168, Length=201, Percent_Identity=44.7761194029851, Blast_Score=173, Evalue=6e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011114
- InterPro:   IPR013849
- InterPro:   IPR003583
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000085
- InterPro:   IPR010994 [H]

Pfam domain/function: PF07499 RuvA_C; PF01330 RuvA_N [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 20385; Mature: 20385

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGRIAGILLEKNPPHLLVDCNGVGYEIDVPMSTFYNLPQTGERVVLLTQQIVREDAHLL
CCCHHEEEEECCCCCEEEEECCCCCEEEECCHHHHHCCCCCCCEEHHHHHHHHHHHHHHH
YGFLTPQERTTFRELLKITGIGARMALAVLSGMSVQELAQAVTMQDAARLTRLPGIGKKT
HEECCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH
AERLLLELKGKLGADLGALAGAASASDHATDILNALLALGYSEKEGLAAIKNVPAGTGVS
HHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCHH
EGIKLALKALSKA
HHHHHHHHHHHCC
>Mature Secondary Structure
MIGRIAGILLEKNPPHLLVDCNGVGYEIDVPMSTFYNLPQTGERVVLLTQQIVREDAHLL
CCCHHEEEEECCCCCEEEEECCCCCEEEECCHHHHHCCCCCCCEEHHHHHHHHHHHHHHH
YGFLTPQERTTFRELLKITGIGARMALAVLSGMSVQELAQAVTMQDAARLTRLPGIGKKT
HEECCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH
AERLLLELKGKLGADLGALAGAASASDHATDILNALLALGYSEKEGLAAIKNVPAGTGVS
HHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCHH
EGIKLALKALSKA
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA