| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688710
Identifier: 116688710
GI number: 116688710
Start: 765995
End: 766948
Strand: Reverse
Name: 116688710
Synonym: Bcen2424_0687
Alternate gene names: NA
Gene position: 766948-765995 (Counterclockwise)
Preceding gene: 116688711
Following gene: 116688709
Centisome position: 22.01
GC content: 72.22
Gene sequence:
>954_bases ATGACGACGCCGCCCAGCCGCCACCCCACCGCACCCGCGCCGGGTCCGCGCTGGGCCGAGCCGATCCGCAAGCGGCTCGT GGCCGGCATCACGCACCTGACGGCCGGCGGCGGCGGCCCGTCGATCGATCTCTCCTCTCCGCCTGGCGACCCAGGGCTGT TCGGCCCCGACGCCGTCTGCTGGCGCGTGCATGCCGATTTCACGTCGATGATGACGGGCGGCATCGCCGCGCTGCTGCTG CAGGCGCTCCACCCGCTCGCACTCGCGGGCGTCTGGGATCATTCGTCGTTCCGCACCGACATCTTCGGCCGCTTGCGGCG CACCGCCACGTTCATCACGGGGACGACGTTCGGCAGCCGCGCGGACGCGCTCGCGCTGATCGAGCGCGTGAAAGCGATCC ATGCGCACATCTCGGGCAGCGCGCCGGACGGGCGGCCGTACCGCGCCGACGATCCCGCGTTGCTCACCTGGGTGCATGTC GCGGAAGTGTCGAGCTTCCTCGCCGCGCATCTGCGTTACGTGAATCCGGCGCTGTCCGGCGAGTTGCAGGACCGCTATTA CGCGGAGACGGCACTGATCGCCGAGCTGCTCGGCGCGCACGAGGTGCCACGTTCGCGTGCCGAGGTAGCGGCCTATCTCG CGCGCATGCTGCCCGAGCTCGAAGCCGGGCCGCGTACCTTCGACGTGATGTCCATTCTGCTGAACGTGCCAGTCGCGAGG CCCGCGCTGCGGCCTGCCGCGTCGCTGGTGATGCATGCCGGGATCGACTTGCTGCCGCCGTGGGCGCAGCGCATGCTCGG CGTGTCGACGTTCGCGCCATTGCGGCGCGCGGTGGTCCGGCCGGGCATCCGCGCGGTCGCCCCCGTGCTGCGCTGGGCGC TCGTCAACGGCGCATCGAAGCGTGCGCGCCGCCGCGCGACGGCTGCCCCGTCCGACGGCACTCCGCCTGCCTGA
Upstream 100 bases:
>100_bases ATCGCCACTTCGGGCTGTCGGTGCCCGATGCGCGCCGCACCGAACGCGACGAGTGGGATACCCCCGACGGCAAGTAATCC GCCGCCGAGCCGCCCCCGCC
Downstream 100 bases:
>100_bases CGATCCGCTTCTTCGGATCATTTCAATTTACTGTCAAATACCTGTGACAAGCTGACGGGCTCGCACCCGCGCACGATCGC ACGCCTTGCCCGTCACGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MTTPPSRHPTAPAPGPRWAEPIRKRLVAGITHLTAGGGGPSIDLSSPPGDPGLFGPDAVCWRVHADFTSMMTGGIAALLL QALHPLALAGVWDHSSFRTDIFGRLRRTATFITGTTFGSRADALALIERVKAIHAHISGSAPDGRPYRADDPALLTWVHV AEVSSFLAAHLRYVNPALSGELQDRYYAETALIAELLGAHEVPRSRAEVAAYLARMLPELEAGPRTFDVMSILLNVPVAR PALRPAASLVMHAGIDLLPPWAQRMLGVSTFAPLRRAVVRPGIRAVAPVLRWALVNGASKRARRRATAAPSDGTPPA
Sequences:
>Translated_317_residues MTTPPSRHPTAPAPGPRWAEPIRKRLVAGITHLTAGGGGPSIDLSSPPGDPGLFGPDAVCWRVHADFTSMMTGGIAALLL QALHPLALAGVWDHSSFRTDIFGRLRRTATFITGTTFGSRADALALIERVKAIHAHISGSAPDGRPYRADDPALLTWVHV AEVSSFLAAHLRYVNPALSGELQDRYYAETALIAELLGAHEVPRSRAEVAAYLARMLPELEAGPRTFDVMSILLNVPVAR PALRPAASLVMHAGIDLLPPWAQRMLGVSTFAPLRRAVVRPGIRAVAPVLRWALVNGASKRARRRATAAPSDGTPPA >Mature_316_residues TTPPSRHPTAPAPGPRWAEPIRKRLVAGITHLTAGGGGPSIDLSSPPGDPGLFGPDAVCWRVHADFTSMMTGGIAALLLQ ALHPLALAGVWDHSSFRTDIFGRLRRTATFITGTTFGSRADALALIERVKAIHAHISGSAPDGRPYRADDPALLTWVHVA EVSSFLAAHLRYVNPALSGELQDRYYAETALIAELLGAHEVPRSRAEVAAYLARMLPELEAGPRTFDVMSILLNVPVARP ALRPAASLVMHAGIDLLPPWAQRMLGVSTFAPLRRAVVRPGIRAVAPVLRWALVNGASKRARRRATAAPSDGTPPA
Specific function: Unknown
COG id: COG3662
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33812; Mature: 33681
Theoretical pI: Translated: 11.15; Mature: 11.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPPSRHPTAPAPGPRWAEPIRKRLVAGITHLTAGGGGPSIDLSSPPGDPGLFGPDAVC CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEE WRVHADFTSMMTGGIAALLLQALHPLALAGVWDHSSFRTDIFGRLRRTATFITGTTFGSR EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEECCCCCCH ADALALIERVKAIHAHISGSAPDGRPYRADDPALLTWVHVAEVSSFLAAHLRYVNPALSG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCC ELQDRYYAETALIAELLGAHEVPRSRAEVAAYLARMLPELEAGPRTFDVMSILLNVPVAR HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC PALRPAASLVMHAGIDLLPPWAQRMLGVSTFAPLRRAVVRPGIRAVAPVLRWALVNGASK HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHH RARRRATAAPSDGTPPA HHHHHHCCCCCCCCCCC >Mature Secondary Structure TTPPSRHPTAPAPGPRWAEPIRKRLVAGITHLTAGGGGPSIDLSSPPGDPGLFGPDAVC CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEE WRVHADFTSMMTGGIAALLLQALHPLALAGVWDHSSFRTDIFGRLRRTATFITGTTFGSR EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEECCCCCCH ADALALIERVKAIHAHISGSAPDGRPYRADDPALLTWVHVAEVSSFLAAHLRYVNPALSG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCC ELQDRYYAETALIAELLGAHEVPRSRAEVAAYLARMLPELEAGPRTFDVMSILLNVPVAR HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC PALRPAASLVMHAGIDLLPPWAQRMLGVSTFAPLRRAVVRPGIRAVAPVLRWALVNGASK HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHH RARRRATAAPSDGTPPA HHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA