| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is erpA1 [H]
Identifier: 116688704
GI number: 116688704
Start: 760495
End: 760866
Strand: Direct
Name: erpA1 [H]
Synonym: Bcen2424_0681
Alternate gene names: 116688704
Gene position: 760495-760866 (Clockwise)
Preceding gene: 116688703
Following gene: 116688706
Centisome position: 21.83
GC content: 60.22
Gene sequence:
>372_bases ATGAACGCTGTTACCGAAACCGCAGCAACGACGACCGATATGCCGCTGCCGTTCGTCTTCACCGACGCCGCGGCCGACAA GGTCAAGCAACTGATCGACGAAGAGGGCAATCCCGACCTGAAGCTGCGCGTGTTCGTGCAGGGTGGCGGCTGCTCGGGCT TCCAGTATGGCTTCACGTTCGACGAGGAAGTCAACGAGGACGACACCGTGATGAACAAGAACGGCGTCCAGCTCCTGATC GACTCGATGAGCTACCAGTACCTGGTCGGCGCGGAAATCGACTACAAGGACGACCTCAACGGCGCCCAGTTCGTGATCAA GAACCCGAACGCGACCACCACCTGCGGGTGCGGTTCGTCGTTCTCGGTCTGA
Upstream 100 bases:
>100_bases ACGCTTGATGAAATCGACAAGAACCTATTGATTTCATGGACATCAGCACGATCTTCTGATCGGCCCTACAATAGCGGCTA AAGCTTTTTGGAGAGTTCGA
Downstream 100 bases:
>100_bases GCGCACGGCAGATCCGCGCCGGTTCGCCGGAATGAAAAACGGGGCTTCATGCCCCGTTTTTTTATGCGCACTCGTCCTGC GGCGCTCACCGCGCGGCGGA
Product: iron-sulfur cluster insertion protein ErpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MNAVTETAATTTDMPLPFVFTDAAADKVKQLIDEEGNPDLKLRVFVQGGGCSGFQYGFTFDEEVNEDDTVMNKNGVQLLI DSMSYQYLVGAEIDYKDDLNGAQFVIKNPNATTTCGCGSSFSV
Sequences:
>Translated_123_residues MNAVTETAATTTDMPLPFVFTDAAADKVKQLIDEEGNPDLKLRVFVQGGGCSGFQYGFTFDEEVNEDDTVMNKNGVQLLI DSMSYQYLVGAEIDYKDDLNGAQFVIKNPNATTTCGCGSSFSV >Mature_123_residues MNAVTETAATTTDMPLPFVFTDAAADKVKQLIDEEGNPDLKLRVFVQGGGCSGFQYGFTFDEEVNEDDTVMNKNGVQLLI DSMSYQYLVGAEIDYKDDLNGAQFVIKNPNATTTCGCGSSFSV
Specific function: Required for insertion of 4Fe-4S clusters (Potential) [H]
COG id: COG0316
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hesB/iscA family [H]
Homologues:
Organism=Homo sapiens, GI160420328, Length=83, Percent_Identity=45.7831325301205, Blast_Score=85, Evalue=1e-17, Organism=Homo sapiens, GI52426768, Length=106, Percent_Identity=32.0754716981132, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1786351, Length=111, Percent_Identity=63.0630630630631, Blast_Score=157, Evalue=2e-40, Organism=Escherichia coli, GI1788877, Length=109, Percent_Identity=35.7798165137615, Blast_Score=68, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71998452, Length=105, Percent_Identity=39.0476190476191, Blast_Score=83, Evalue=3e-17, Organism=Caenorhabditis elegans, GI193209025, Length=112, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=1e-13, Organism=Caenorhabditis elegans, GI25146411, Length=120, Percent_Identity=27.5, Blast_Score=70, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323001, Length=97, Percent_Identity=40.2061855670103, Blast_Score=79, Evalue=2e-16, Organism=Drosophila melanogaster, GI24649697, Length=118, Percent_Identity=38.9830508474576, Blast_Score=86, Evalue=7e-18, Organism=Drosophila melanogaster, GI24642263, Length=107, Percent_Identity=33.6448598130841, Blast_Score=69, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000361 - InterPro: IPR016092 - InterPro: IPR017870 - InterPro: IPR023063 [H]
Pfam domain/function: PF01521 Fe-S_biosyn [H]
EC number: NA
Molecular weight: Translated: 13313; Mature: 13313
Theoretical pI: Translated: 3.78; Mature: 3.78
Prosite motif: PS01152 HESB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAVTETAATTTDMPLPFVFTDAAADKVKQLIDEEGNPDLKLRVFVQGGGCSGFQYGFTF CCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEECCEEE DEEVNEDDTVMNKNGVQLLIDSMSYQYLVGAEIDYKDDLNGAQFVIKNPNATTTCGCGSS CCCCCCCCEEECCCCEEEEEECCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEECCCCC FSV CCC >Mature Secondary Structure MNAVTETAATTTDMPLPFVFTDAAADKVKQLIDEEGNPDLKLRVFVQGGGCSGFQYGFTF CCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEECCEEE DEEVNEDDTVMNKNGVQLLIDSMSYQYLVGAEIDYKDDLNGAQFVIKNPNATTTCGCGSS CCCCCCCCEEECCCCEEEEEECCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEECCCCC FSV CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA