Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688687

Identifier: 116688687

GI number: 116688687

Start: 738408

End: 739055

Strand: Reverse

Name: 116688687

Synonym: Bcen2424_0664

Alternate gene names: NA

Gene position: 739055-738408 (Counterclockwise)

Preceding gene: 116688689

Following gene: 116688682

Centisome position: 21.21

GC content: 71.14

Gene sequence:

>648_bases
ATGAAAGACAAACCCGCCCAGGGGCCGCGCGGCCTCGACAAGGACGCGATCGTCGCGGCCGCGCTCGCGCTGCTCGAAGA
CGTCGGCGAAGCCGCGTTCAGCGTGCGCAAGCTCGCGCAATCGGTCGGCTGCGACCCGATGAGCGTGCTGTATCACTTCA
AGTCCAAGGAAGGCCTGAGCCGTGCGATCGCGAATGCGCTGTCGCGCTCGCTCGTGCCGGTCGATCCTTCACTGCCGTGG
CGCGAACGGCTGCGCGACCTCGCGCGCCAATACCGCACGCTCGCGCTGCGCTACCCCGCCGCATTCGCGCTGCTGCAGCG
GCACATGAGCACGGGGCCGGCCGATCTCGCGCACATCGAGGCCGTGCATCGCGCGCTGACCGACGCCGGCATCCCGCGCG
CGGCGCTGCCGTCGGTATGCGTCGGCTGGTACGCGAGCGTAATCGGGCTCGCCGCCGCCGAAGCGGGCGGCCTCACGCGC
GCCGCGAACGACGTCGAGCTCGCGGAAATGCACGCGCTGGCCGACGCCGCGCATCCGCTCGTCAAGTCGGCCGCCCCGCT
CTATGCGCAGCTCGATCCGGCCGTCGTGCACGACACGATGCTCGACGTGCTGCTCGACGGCATCGCGCAACGCGCACGCA
CGGCCTGA

Upstream 100 bases:

>100_bases
GGGACACCCAATTTCTACACCGCAGAAATAATTCTACAGTGTAGAATAAGCTTTCGTCAAGTTTACAGCCGGTACGGTGC
CGGCCTGCCAGCCCGCCTCG

Downstream 100 bases:

>100_bases
CCGGCTTGCGCATCGCCAACGAAAAAGGCGCCCGAAGGCGCCTTTTTCATGACGATGACCGCGAACCGCGCTCAGTGCTG
CTGCGCGAGGCCGATCTTCA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: TetR-Family Transcriptional Regulator; Regulatory Protein TetR; TetR Family Transcriptional Regulatory Protein; Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Transcription Regulator; Transcriptional Regulator

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MKDKPAQGPRGLDKDAIVAAALALLEDVGEAAFSVRKLAQSVGCDPMSVLYHFKSKEGLSRAIANALSRSLVPVDPSLPW
RERLRDLARQYRTLALRYPAAFALLQRHMSTGPADLAHIEAVHRALTDAGIPRAALPSVCVGWYASVIGLAAAEAGGLTR
AANDVELAEMHALADAAHPLVKSAAPLYAQLDPAVVHDTMLDVLLDGIAQRARTA

Sequences:

>Translated_215_residues
MKDKPAQGPRGLDKDAIVAAALALLEDVGEAAFSVRKLAQSVGCDPMSVLYHFKSKEGLSRAIANALSRSLVPVDPSLPW
RERLRDLARQYRTLALRYPAAFALLQRHMSTGPADLAHIEAVHRALTDAGIPRAALPSVCVGWYASVIGLAAAEAGGLTR
AANDVELAEMHALADAAHPLVKSAAPLYAQLDPAVVHDTMLDVLLDGIAQRARTA
>Mature_215_residues
MKDKPAQGPRGLDKDAIVAAALALLEDVGEAAFSVRKLAQSVGCDPMSVLYHFKSKEGLSRAIANALSRSLVPVDPSLPW
RERLRDLARQYRTLALRYPAAFALLQRHMSTGPADLAHIEAVHRALTDAGIPRAALPSVCVGWYASVIGLAAAEAGGLTR
AANDVELAEMHALADAAHPLVKSAAPLYAQLDPAVVHDTMLDVLLDGIAQRARTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22825; Mature: 22825

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDKPAQGPRGLDKDAIVAAALALLEDVGEAAFSVRKLAQSVGCDPMSVLYHFKSKEGLS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
RAIANALSRSLVPVDPSLPWRERLRDLARQYRTLALRYPAAFALLQRHMSTGPADLAHIE
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AVHRALTDAGIPRAALPSVCVGWYASVIGLAAAEAGGLTRAANDVELAEMHALADAAHPL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHH
VKSAAPLYAQLDPAVVHDTMLDVLLDGIAQRARTA
HHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKDKPAQGPRGLDKDAIVAAALALLEDVGEAAFSVRKLAQSVGCDPMSVLYHFKSKEGLS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
RAIANALSRSLVPVDPSLPWRERLRDLARQYRTLALRYPAAFALLQRHMSTGPADLAHIE
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AVHRALTDAGIPRAALPSVCVGWYASVIGLAAAEAGGLTRAANDVELAEMHALADAAHPL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHH
VKSAAPLYAQLDPAVVHDTMLDVLLDGIAQRARTA
HHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA