| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is secA [H]
Identifier: 116688593
GI number: 116688593
Start: 640166
End: 642964
Strand: Direct
Name: secA [H]
Synonym: Bcen2424_0569
Alternate gene names: 116688593
Gene position: 640166-642964 (Clockwise)
Preceding gene: 116688591
Following gene: 116688594
Centisome position: 18.37
GC content: 65.42
Gene sequence:
>2799_bases ATGACAACCGGTTTTCTCCAGAAAATTTTTGGCAGCCGCAACCAGCGGCTCGTCAAGCAATACCAAAAGACCGTCGCGAC GATCAATGCGCTCGAAACGCAGATCGAGAAGCTGACGGACGACCAGTTGCGCGGCAAGACGGACGAATTCCGCCAGCGGG TCGCGGCCGGCGAGTCGCTCGACAAGCTGCTGCCCGAGGCCTTCGCGGTCTGTCGCGAAGCGAGCCGTCGCGTGCTGAAG ATGCGGCACTTCGACGTGCAGATGATCGGCGGCATGGTGCTCCACTACGGCAAGATCGCCGAAATGCGCACCGGCGAAGG CAAGACGCTCGTCGCGACGCTGCCCGTGTACCTGAATGCGCTGGCCGGCCGCGGCGTGCACGTCGTGACCGTCAACGACT ACCTCGCGCAGCGCGACGCCGAATGGATGGCGCGCCTCTACAACTTCCTCGGTCTGTCGGTCGGCATCAACCTGTCCGGC ATGGAGCACGACCAGAAGCAGCAGGCCTACGCGGCGGACATCACGTACGGCACGAACAACGAATTCGGCTTCGACTACCT GCGCGACAACATGGTCTACGAGACCGACGCGCGCGTGCAGCGGGCCCTGAACTTCGCGGTCGTCGACGAAGTGGACTCGA TCCTGATCGACGAAGCGCGTACGCCGCTGATCATTTCGGGCCAGGCCGAGGATCACACCGAGCTGTACGTGCGGATGAAC GCACTGCCGCCGCTGCTCGAGCGCCAGATCGGCGAGGAGAAGGCCGACGGCACGGGCGTCGAGAAGCCGGGCGACTACAC GCTCGACGAGAAGGCGCGCCAGGTGTTCCTGACGGAATCGGGCCACGAGAAGGCCGAGCGCCTGCTCGCCGAATGGGGCC TGATCGGCGAGGGCGAGAGCCTGTACGCGCCGCAGAACATCACGCTGATGCACCACGTGTACGCGGCGCTGCGCGCCCAC ACGCTGTTCCACAAGGATCAGCACTACGTCGTGCAGAACGGCGAAGTGGTCATCGTCGACGAATTCACGGGCCGCCTGAT GGCCGGCCGCCGCTGGTCGGACGGCCTGCACCAGGCGGTCGAGGCGAAGGAGCACGTGAAGATCCAGAGCGAGAACCAGA CGCTCGCGTCGATCACGTTCCAGAACTACTTCCGGATGTACGCGAAGCTGGCCGGCATGACCGGTACCGCGGACACCGAG GCGTACGAATTCAACGAGATCTACGGCCTCGAGACGGTCGTGATCCCGACCAACCGCCCGCCGAAGCGGATCGACAAGCA GGACCAGATCTACAAGACGGCCAAGGAGCGCTACGACGCGGTGATCCGCGACATCCGCGACTGCTACGAGCGTGGCCAGC CGGTGCTGGTCGGCACGACGTCGATCGAGAACTCCGAACTGCTGTCGCACCTGCTGAAGCAGGCCGGGCTGCCGCACGAA GTGCTGAACGCGAAGCAGCACGAGCGTGAAGCGGCGATCGTCGCGGAAGCCGGCCGTCCGAAGCGCATCACGATCGCGAC CAACATGGCCGGCCGCGGTACCGACATCGTGCTCGGCGGCAACGCGGAGAAGCAGGCGGCGTTCATTGAGGCCGACGATG CGATTCCGGCCGACGAAAAGGCCCGTCGCATCCAGAAGCTGCACGACGAGTGGGAAACGCTGCACGAGGAAGTGAAGGCT GCGGGCGGCCTGCACATCATCGGCACCGAGCGCCACGAATCGCGCCGGATCGACAACCAGCTGCGCGGCCGTGCAGGCCG CCAGGGCGATCCGGGCTCGTCGCGCTTCTACCTGTCGCTCGACGACCCGCTGCTGCGCATCTTCGCGGGCGACCGCGTGC GCTCGATCATGGATCGCCTGAAGATGCCGGAAGGCGAGGCGATCGAGGCGGGCATCGTCACGCGGTCGATCGAATCGGCG CAGCGCAAGGTCGAAGCGCGCAACTTCGACATCCGCAAGCAGCTGCTCGAATACGACGACGTGTCGAACGACCAGCGCAA GGTGATCTACCAGCAGCGCAACGAGCTGCTCGAAGCGCACGACATCACCGAGACGATCACCGCGATGCGTCACGGCGTGA TCACCGAAGTCGTCCGCCAGTTCGTGCCGGAAGGCAGCATCGAAGAGCAGTGGGACGTGCCCGAGCTCGAGGAAGCGCTG CGCAACGACTGGCAGCTCGATCTCGCGATCCAGGAAATGGTGAACGAGTCGTCGTCGATCACCGCCGAGGAGATCCTCGA CGCCGTGATGACGGCCGCCGACGAGCAGTACGAGGCGAAGGTCGCGATGGTCGGCCGCGAATCGTTCAGCGCTTTCGAGC GCTCGGTGATGCTGCAGACGGTCGACCGCCTGTGGCGCGAGCATCTGGCGGCGCTCGACCACCTGCGCCAGGGCATCCAC CTGCGCGGCTATGCGCAGAAGAACCCGAAGCAGGAGTACAAGCGCGAGGCGTTCGAGCTGTTCGCCGCGATGCTCGACGC GATCAAGCAGGAAGTCACGCGCATCGTGATGAACGTGCAGATCCAATCGCCGGAGCAGCTGGAAGAGGCGGCCGAGCAGA TCGAGGAGCGCGGCGGTCATCTCGAGAACGTCGAATACCAGCACGCCGACTACGCGGACGCCGGCGCGCCGGTGGCGAAC GTCACCGCAGCCGCGGCGGCCACGGCGACGGCCGACATGGTCGGCAGCGCGATGACGCACAGCGGCCCCGGCGGCGAAAT GCCGAAGGTCGGTCGCAACGACCCGTGCCCGTGCGGCAGCGGCAAGAAGTACAAGCAATGTCACGGGAAGCTGTCATGA
Upstream 100 bases:
>100_bases TCAACGTTTGAGTCCACTAATTCGCTAAGCCGCCGAGGCTCGGGCGCCGGGGCGCGCAACACGCGCCGGGCGTCGGTGCT GCGACGCAGGATCCGATCCG
Downstream 100 bases:
>100_bases TCGGCGGCGGCGCGCGTCACGCGTGCCGCGTCGTTCGCAGCTTCGAGTCAGTGATGTGAGTTGTGGCGGCCCGCGCGTGC GGCCGCCGGTTCTTCCAATC
Product: preprotein translocase subunit SecA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 932; Mature: 931
Protein sequence:
>932_residues MTTGFLQKIFGSRNQRLVKQYQKTVATINALETQIEKLTDDQLRGKTDEFRQRVAAGESLDKLLPEAFAVCREASRRVLK MRHFDVQMIGGMVLHYGKIAEMRTGEGKTLVATLPVYLNALAGRGVHVVTVNDYLAQRDAEWMARLYNFLGLSVGINLSG MEHDQKQQAYAADITYGTNNEFGFDYLRDNMVYETDARVQRALNFAVVDEVDSILIDEARTPLIISGQAEDHTELYVRMN ALPPLLERQIGEEKADGTGVEKPGDYTLDEKARQVFLTESGHEKAERLLAEWGLIGEGESLYAPQNITLMHHVYAALRAH TLFHKDQHYVVQNGEVVIVDEFTGRLMAGRRWSDGLHQAVEAKEHVKIQSENQTLASITFQNYFRMYAKLAGMTGTADTE AYEFNEIYGLETVVIPTNRPPKRIDKQDQIYKTAKERYDAVIRDIRDCYERGQPVLVGTTSIENSELLSHLLKQAGLPHE VLNAKQHEREAAIVAEAGRPKRITIATNMAGRGTDIVLGGNAEKQAAFIEADDAIPADEKARRIQKLHDEWETLHEEVKA AGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSLDDPLLRIFAGDRVRSIMDRLKMPEGEAIEAGIVTRSIESA QRKVEARNFDIRKQLLEYDDVSNDQRKVIYQQRNELLEAHDITETITAMRHGVITEVVRQFVPEGSIEEQWDVPELEEAL RNDWQLDLAIQEMVNESSSITAEEILDAVMTAADEQYEAKVAMVGRESFSAFERSVMLQTVDRLWREHLAALDHLRQGIH LRGYAQKNPKQEYKREAFELFAAMLDAIKQEVTRIVMNVQIQSPEQLEEAAEQIEERGGHLENVEYQHADYADAGAPVAN VTAAAAATATADMVGSAMTHSGPGGEMPKVGRNDPCPCGSGKKYKQCHGKLS
Sequences:
>Translated_932_residues MTTGFLQKIFGSRNQRLVKQYQKTVATINALETQIEKLTDDQLRGKTDEFRQRVAAGESLDKLLPEAFAVCREASRRVLK MRHFDVQMIGGMVLHYGKIAEMRTGEGKTLVATLPVYLNALAGRGVHVVTVNDYLAQRDAEWMARLYNFLGLSVGINLSG MEHDQKQQAYAADITYGTNNEFGFDYLRDNMVYETDARVQRALNFAVVDEVDSILIDEARTPLIISGQAEDHTELYVRMN ALPPLLERQIGEEKADGTGVEKPGDYTLDEKARQVFLTESGHEKAERLLAEWGLIGEGESLYAPQNITLMHHVYAALRAH TLFHKDQHYVVQNGEVVIVDEFTGRLMAGRRWSDGLHQAVEAKEHVKIQSENQTLASITFQNYFRMYAKLAGMTGTADTE AYEFNEIYGLETVVIPTNRPPKRIDKQDQIYKTAKERYDAVIRDIRDCYERGQPVLVGTTSIENSELLSHLLKQAGLPHE VLNAKQHEREAAIVAEAGRPKRITIATNMAGRGTDIVLGGNAEKQAAFIEADDAIPADEKARRIQKLHDEWETLHEEVKA AGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSLDDPLLRIFAGDRVRSIMDRLKMPEGEAIEAGIVTRSIESA QRKVEARNFDIRKQLLEYDDVSNDQRKVIYQQRNELLEAHDITETITAMRHGVITEVVRQFVPEGSIEEQWDVPELEEAL RNDWQLDLAIQEMVNESSSITAEEILDAVMTAADEQYEAKVAMVGRESFSAFERSVMLQTVDRLWREHLAALDHLRQGIH LRGYAQKNPKQEYKREAFELFAAMLDAIKQEVTRIVMNVQIQSPEQLEEAAEQIEERGGHLENVEYQHADYADAGAPVAN VTAAAAATATADMVGSAMTHSGPGGEMPKVGRNDPCPCGSGKKYKQCHGKLS >Mature_931_residues TTGFLQKIFGSRNQRLVKQYQKTVATINALETQIEKLTDDQLRGKTDEFRQRVAAGESLDKLLPEAFAVCREASRRVLKM RHFDVQMIGGMVLHYGKIAEMRTGEGKTLVATLPVYLNALAGRGVHVVTVNDYLAQRDAEWMARLYNFLGLSVGINLSGM EHDQKQQAYAADITYGTNNEFGFDYLRDNMVYETDARVQRALNFAVVDEVDSILIDEARTPLIISGQAEDHTELYVRMNA LPPLLERQIGEEKADGTGVEKPGDYTLDEKARQVFLTESGHEKAERLLAEWGLIGEGESLYAPQNITLMHHVYAALRAHT LFHKDQHYVVQNGEVVIVDEFTGRLMAGRRWSDGLHQAVEAKEHVKIQSENQTLASITFQNYFRMYAKLAGMTGTADTEA YEFNEIYGLETVVIPTNRPPKRIDKQDQIYKTAKERYDAVIRDIRDCYERGQPVLVGTTSIENSELLSHLLKQAGLPHEV LNAKQHEREAAIVAEAGRPKRITIATNMAGRGTDIVLGGNAEKQAAFIEADDAIPADEKARRIQKLHDEWETLHEEVKAA GGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSLDDPLLRIFAGDRVRSIMDRLKMPEGEAIEAGIVTRSIESAQ RKVEARNFDIRKQLLEYDDVSNDQRKVIYQQRNELLEAHDITETITAMRHGVITEVVRQFVPEGSIEEQWDVPELEEALR NDWQLDLAIQEMVNESSSITAEEILDAVMTAADEQYEAKVAMVGRESFSAFERSVMLQTVDRLWREHLAALDHLRQGIHL RGYAQKNPKQEYKREAFELFAAMLDAIKQEVTRIVMNVQIQSPEQLEEAAEQIEERGGHLENVEYQHADYADAGAPVANV TAAAAATATADMVGSAMTHSGPGGEMPKVGRNDPCPCGSGKKYKQCHGKLS
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the pr
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family [H]
Homologues:
Organism=Escherichia coli, GI1786287, Length=934, Percent_Identity=59.4218415417559, Blast_Score=1098, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004027 - InterPro: IPR000185 - InterPro: IPR020937 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 [H]
Pfam domain/function: PF02810 SEC-C; PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW [H]
EC number: NA
Molecular weight: Translated: 104781; Mature: 104649
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS01312 SECA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTGFLQKIFGSRNQRLVKQYQKTVATINALETQIEKLTDDQLRGKTDEFRQRVAAGESL CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHCCCHH DKLLPEAFAVCREASRRVLKMRHFDVQMIGGMVLHYGKIAEMRTGEGKTLVATLPVYLNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEHHHHHHH LAGRGVHVVTVNDYLAQRDAEWMARLYNFLGLSVGINLSGMEHDQKQQAYAADITYGTNN HCCCCEEEEEECHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEEEEECCCC EFGFDYLRDNMVYETDARVQRALNFAVVDEVDSILIDEARTPLIISGQAEDHTELYVRMN CCCHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEC ALPPLLERQIGEEKADGTGVEKPGDYTLDEKARQVFLTESGHEKAERLLAEWGLIGEGES CCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHEEEECCCCHHHHHHHHHHHCCCCCCCC LYAPQNITLMHHVYAALRAHTLFHKDQHYVVQNGEVVIVDEFTGRLMAGRRWSDGLHQAV EECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCHHHCCCCCHHHHHHHH EAKEHVKIQSENQTLASITFQNYFRMYAKLAGMTGTADTEAYEFNEIYGLETVVIPTNRP HHHHHCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHCCCCEEEEECCCCC PKRIDKQDQIYKTAKERYDAVIRDIRDCYERGQPVLVGTTSIENSELLSHLLKQAGLPHE HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCHH VLNAKQHEREAAIVAEAGRPKRITIATNMAGRGTDIVLGGNAEKQAAFIEADDAIPADEK HHCCHHHHHHHHHEECCCCCCEEEEEECCCCCCCEEEECCCCCCCEEEEECCCCCCCHHH ARRIQKLHDEWETLHEEVKAAGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSL HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEE DDPLLRIFAGDRVRSIMDRLKMPEGEAIEAGIVTRSIESAQRKVEARNFDIRKQLLEYDD CCHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC VSNDQRKVIYQQRNELLEAHDITETITAMRHGVITEVVRQFVPEGSIEEQWDVPELEEAL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH RNDWQLDLAIQEMVNESSSITAEEILDAVMTAADEQYEAKVAMVGRESFSAFERSVMLQT HCCCEEHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH VDRLWREHLAALDHLRQGIHLRGYAQKNPKQEYKREAFELFAAMLDAIKQEVTRIVMNVQ HHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE IQSPEQLEEAAEQIEERGGHLENVEYQHADYADAGAPVANVTAAAAATATADMVGSAMTH CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC SGPGGEMPKVGRNDPCPCGSGKKYKQCHGKLS CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC >Mature Secondary Structure TTGFLQKIFGSRNQRLVKQYQKTVATINALETQIEKLTDDQLRGKTDEFRQRVAAGESL CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHCCCHH DKLLPEAFAVCREASRRVLKMRHFDVQMIGGMVLHYGKIAEMRTGEGKTLVATLPVYLNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEHHHHHHH LAGRGVHVVTVNDYLAQRDAEWMARLYNFLGLSVGINLSGMEHDQKQQAYAADITYGTNN HCCCCEEEEEECHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEEEEECCCC EFGFDYLRDNMVYETDARVQRALNFAVVDEVDSILIDEARTPLIISGQAEDHTELYVRMN CCCHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEC ALPPLLERQIGEEKADGTGVEKPGDYTLDEKARQVFLTESGHEKAERLLAEWGLIGEGES CCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHEEEECCCCHHHHHHHHHHHCCCCCCCC LYAPQNITLMHHVYAALRAHTLFHKDQHYVVQNGEVVIVDEFTGRLMAGRRWSDGLHQAV EECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCHHHCCCCCHHHHHHHH EAKEHVKIQSENQTLASITFQNYFRMYAKLAGMTGTADTEAYEFNEIYGLETVVIPTNRP HHHHHCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHCCCCEEEEECCCCC PKRIDKQDQIYKTAKERYDAVIRDIRDCYERGQPVLVGTTSIENSELLSHLLKQAGLPHE HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCHH VLNAKQHEREAAIVAEAGRPKRITIATNMAGRGTDIVLGGNAEKQAAFIEADDAIPADEK HHCCHHHHHHHHHEECCCCCCEEEEEECCCCCCCEEEECCCCCCCEEEEECCCCCCCHHH ARRIQKLHDEWETLHEEVKAAGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSL HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEE DDPLLRIFAGDRVRSIMDRLKMPEGEAIEAGIVTRSIESAQRKVEARNFDIRKQLLEYDD CCHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC VSNDQRKVIYQQRNELLEAHDITETITAMRHGVITEVVRQFVPEGSIEEQWDVPELEEAL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH RNDWQLDLAIQEMVNESSSITAEEILDAVMTAADEQYEAKVAMVGRESFSAFERSVMLQT HCCCEEHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH VDRLWREHLAALDHLRQGIHLRGYAQKNPKQEYKREAFELFAAMLDAIKQEVTRIVMNVQ HHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE IQSPEQLEEAAEQIEERGGHLENVEYQHADYADAGAPVANVTAAAAATATADMVGSAMTH CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC SGPGGEMPKVGRNDPCPCGSGKKYKQCHGKLS CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA