Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688551

Identifier: 116688551

GI number: 116688551

Start: 587166

End: 588965

Strand: Direct

Name: 116688551

Synonym: Bcen2424_0527

Alternate gene names: NA

Gene position: 587166-588965 (Clockwise)

Preceding gene: 116688550

Following gene: 116688552

Centisome position: 16.85

GC content: 68.0

Gene sequence:

>1800_bases
ATGACCCAGCCGATCCGCTATTCGATTGTCCCGAAAGATCTTGCCGCGCACCTGTTCGAAGTGACGGTGACGGTTGCCGA
TCCCGATCCCGAAGGCCAGCGTTTCTCGCTGCCGGTATGGATTCCGGGCAGCTATCTCGTGCGCGAGTTCGCGCGCAACA
TCGTGACGCTGCGCGCGTTCAACGACGCGGGCCGCAAGGTGCGCATCGCGAAGACCGACAAGCACACGTGGCAGGCCGCG
CCCGTGACCGGCGCGCTGACGCTGCGCTACGACGTGTATGCATGGGATTTGTCGGTGCGCTCCGCGTATCTCGACGAATC
GGGCGGCTTCTTCAACGCGACGGCCGTGTTCCTGAGCGTCGCCGGTCGTGAGGACGCGCCGTGCGAAGTCGACATCGCGA
AACCGGCCGGCGCGGCGTTCCGCACGTGGCGCGTCGGCACCGCGCTGCCCGAAGCGGGCGGCACCCGGCGTTACGGTTTC
GGCGCGTATCGCGCGGCGAACTATGACGAGCTGTCCGACCATCCGGTGACGATCGGCGAATTCGCGCTCGCGACGTTCGA
CGCGCACGGCGTGCCGCACGACATCGTGATCGCCGGGCGCGTGACGCAACTCGACCTGGAGCGGCTGCGTACCGATCTGA
AACGCGTGTGCGAAGCGCAGATCGCGCTGTTCGAGCCGAAGTCGAAAAAGGCGCCGATGGACCGCTACGTATTCATGACG
CTCGCGGTCAGCGACGGCTACGGCGGCCTCGAGCATCGCGCATCGACCGCGCTGATCTGCAACCGGACCGACCTGCCGGT
GAAGGGGCGGCCGGAAACGACGGAAGGCTATCGCACGTATCTCGGCCTCTGCAGCCACGAGTATTTCCACACGTGGAACG
TGAAGCGCATCAAGCCGGCGGCGTTCGTGCCGTACGACCTCACGCGCGAGAACTACACGTCGCTGCTGTGGCTGTTCGAG
GGCTTCACGTCGTATTACGACGACCTGATGCTGGTGCGCAGCGGGCTGATGTCGCAGGACGACTATTTCGCGGCCCTCGG
CCGCACGATCGGTGGCGTGCTGCGCGGCACGGGCCGGCTCAAGCAGAGCGTCGCGGAAAGCTCGTTCGACGCGTGGATCA
AGTACTACCGCCAGGACGAGAACGCGACCAACGCGATCGTCAGCTATTACACGAAGGGCTCGCTCGTCGCGCTGGCGTTC
GATCTCGCGATCCGCGCGCAGACGCGCAACCGGAAGTCGCTCGACGACGTGATGCGTCTGCTGTGGCAACGCTACGGCCG
CGACTTCTATCGCGGCAAGCAGGCGGGCGTGGACGAAAACGAAGTCGAGGCGCTGATCGAGGAGGCGACGGGCGTCGCGC
TCGGCCGCCTGTTCGCCGACGCCGTGCACGGCACGCGCGACCTGCCGCTCGGCGAACTGCTCGCGCCGTTCGGCGTGACG
CTGGCCCCCGACGTCGCGACCGGCGCGGCCGCGAAACCGACGATCGGCGCGCGCCTGCGCGGCGGCGCGGACTGCACGTT
GGCGGCGGTCTACGAAGGCGGCGCCGCGCATCGCGCGGGGCTGTCGGCCGGCGACACGCTGATCGCGGTCGACGGGCTGC
GTGTGACGGGCACGAACCTCGATGCGCTGCTCGCACGCTACCGGCCGGGCGACAAGGTCGAGATTCACGCGTTCCGCCGC
GACGAGCTGCGCACCGCGAAACTGAAGCTCGACGGCCCGGAAGTCACCCGCTACCGGCTGACGGCGGCCGCGAAGCCGGC
TGCGGCCACGAAGGCCCGCGAAGCCTGGCTGAAGGGGTAA

Upstream 100 bases:

>100_bases
TGCACGCCGGGCGCAGCGCCCGGCCAGCGAGGGGCGCCCGCATGATCTGCCGGCGCCTCTCTTCGTTTTCGCCGCCGTAT
TCGACCGACCGATTGCCACG

Downstream 100 bases:

>100_bases
TCGTACGAAAACGGGTAGCGGGGCACGATCGGCGATTGTTCTGTTGCTGCAACAATCCGTCGCCCTGAACCCGCTTTTTC
GCGGTCATGCGGCCACGCAC

Product: peptidase M61 domain-containing protein

Products: NA

Alternate protein names: Peptidase M; Protease; M61 Family Peptidase; M61 Glycyl Aminopeptidase; Glycyl Aminopeptidase; M61 Family Glycyl Aminopeptidase; Pdz/Dhr/Glgf; Trypsin-Like Serine Protease; Metallopeptidase; Aminopeptidase N Family Protein; PDZ Domain-Containing Protein; Protease With C-Terminal PDZ Domain-Containing Protein; PDZ/DHR/GLGFPeptidase M; Signaling Protein; M61 Glycyl Aminopeptidase Protein; PDZ Domain Protein; M61 Glycyl Aminopeptidase Family Protein; Protease With C-Terminal PDZ Domain

Number of amino acids: Translated: 599; Mature: 598

Protein sequence:

>599_residues
MTQPIRYSIVPKDLAAHLFEVTVTVADPDPEGQRFSLPVWIPGSYLVREFARNIVTLRAFNDAGRKVRIAKTDKHTWQAA
PVTGALTLRYDVYAWDLSVRSAYLDESGGFFNATAVFLSVAGREDAPCEVDIAKPAGAAFRTWRVGTALPEAGGTRRYGF
GAYRAANYDELSDHPVTIGEFALATFDAHGVPHDIVIAGRVTQLDLERLRTDLKRVCEAQIALFEPKSKKAPMDRYVFMT
LAVSDGYGGLEHRASTALICNRTDLPVKGRPETTEGYRTYLGLCSHEYFHTWNVKRIKPAAFVPYDLTRENYTSLLWLFE
GFTSYYDDLMLVRSGLMSQDDYFAALGRTIGGVLRGTGRLKQSVAESSFDAWIKYYRQDENATNAIVSYYTKGSLVALAF
DLAIRAQTRNRKSLDDVMRLLWQRYGRDFYRGKQAGVDENEVEALIEEATGVALGRLFADAVHGTRDLPLGELLAPFGVT
LAPDVATGAAAKPTIGARLRGGADCTLAAVYEGGAAHRAGLSAGDTLIAVDGLRVTGTNLDALLARYRPGDKVEIHAFRR
DELRTAKLKLDGPEVTRYRLTAAAKPAAATKAREAWLKG

Sequences:

>Translated_599_residues
MTQPIRYSIVPKDLAAHLFEVTVTVADPDPEGQRFSLPVWIPGSYLVREFARNIVTLRAFNDAGRKVRIAKTDKHTWQAA
PVTGALTLRYDVYAWDLSVRSAYLDESGGFFNATAVFLSVAGREDAPCEVDIAKPAGAAFRTWRVGTALPEAGGTRRYGF
GAYRAANYDELSDHPVTIGEFALATFDAHGVPHDIVIAGRVTQLDLERLRTDLKRVCEAQIALFEPKSKKAPMDRYVFMT
LAVSDGYGGLEHRASTALICNRTDLPVKGRPETTEGYRTYLGLCSHEYFHTWNVKRIKPAAFVPYDLTRENYTSLLWLFE
GFTSYYDDLMLVRSGLMSQDDYFAALGRTIGGVLRGTGRLKQSVAESSFDAWIKYYRQDENATNAIVSYYTKGSLVALAF
DLAIRAQTRNRKSLDDVMRLLWQRYGRDFYRGKQAGVDENEVEALIEEATGVALGRLFADAVHGTRDLPLGELLAPFGVT
LAPDVATGAAAKPTIGARLRGGADCTLAAVYEGGAAHRAGLSAGDTLIAVDGLRVTGTNLDALLARYRPGDKVEIHAFRR
DELRTAKLKLDGPEVTRYRLTAAAKPAAATKAREAWLKG
>Mature_598_residues
TQPIRYSIVPKDLAAHLFEVTVTVADPDPEGQRFSLPVWIPGSYLVREFARNIVTLRAFNDAGRKVRIAKTDKHTWQAAP
VTGALTLRYDVYAWDLSVRSAYLDESGGFFNATAVFLSVAGREDAPCEVDIAKPAGAAFRTWRVGTALPEAGGTRRYGFG
AYRAANYDELSDHPVTIGEFALATFDAHGVPHDIVIAGRVTQLDLERLRTDLKRVCEAQIALFEPKSKKAPMDRYVFMTL
AVSDGYGGLEHRASTALICNRTDLPVKGRPETTEGYRTYLGLCSHEYFHTWNVKRIKPAAFVPYDLTRENYTSLLWLFEG
FTSYYDDLMLVRSGLMSQDDYFAALGRTIGGVLRGTGRLKQSVAESSFDAWIKYYRQDENATNAIVSYYTKGSLVALAFD
LAIRAQTRNRKSLDDVMRLLWQRYGRDFYRGKQAGVDENEVEALIEEATGVALGRLFADAVHGTRDLPLGELLAPFGVTL
APDVATGAAAKPTIGARLRGGADCTLAAVYEGGAAHRAGLSAGDTLIAVDGLRVTGTNLDALLARYRPGDKVEIHAFRRD
ELRTAKLKLDGPEVTRYRLTAAAKPAAATKAREAWLKG

Specific function: Unknown

COG id: COG3975

COG function: function code R; Predicted protease with the C-terminal PDZ domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65946; Mature: 65815

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPIRYSIVPKDLAAHLFEVTVTVADPDPEGQRFSLPVWIPGSYLVREFARNIVTLRAF
CCCCEEEEECCHHHHHEEEEEEEEEECCCCCCCEEEEEEEECHHHHHHHHHHHEEEEEEE
NDAGRKVRIAKTDKHTWQAAPVTGALTLRYDVYAWDLSVRSAYLDESGGFFNATAVFLSV
CCCCCEEEEEECCCCCEEECCCCEEEEEEEEEEEEEEEHHHHHCCCCCCEEEHEEEEEEE
AGREDAPCEVDIAKPAGAAFRTWRVGTALPEAGGTRRYGFGAYRAANYDELSDHPVTIGE
CCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHH
FALATFDAHGVPHDIVIAGRVTQLDLERLRTDLKRVCEAQIALFEPKSKKAPMDRYVFMT
HEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEE
LAVSDGYGGLEHRASTALICNRTDLPVKGRPETTEGYRTYLGLCSHEYFHTWNVKRIKPA
EEEECCCCCCHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCEEECCC
AFVPYDLTRENYTSLLWLFEGFTSYYDDLMLVRSGLMSQDDYFAALGRTIGGVLRGTGRL
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHH
KQSVAESSFDAWIKYYRQDENATNAIVSYYTKGSLVALAFDLAIRAQTRNRKSLDDVMRL
HHHHHHHHHHHHHHHHHCCCCHHHHHHEEECCCCEEEEEEEHHHEECCCCCCCHHHHHHH
LWQRYGRDFYRGKQAGVDENEVEALIEEATGVALGRLFADAVHGTRDLPLGELLAPFGVT
HHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCE
LAPDVATGAAAKPTIGARLRGGADCTLAAVYEGGAAHRAGLSAGDTLIAVDGLRVTGTNL
ECCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCCHHHCCCCCCCEEEEECCEEEECCCH
DALLARYRPGDKVEIHAFRRDELRTAKLKLDGPEVTRYRLTAAAKPAAATKAREAWLKG
HHHHHHCCCCCEEEEEEEECCCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
TQPIRYSIVPKDLAAHLFEVTVTVADPDPEGQRFSLPVWIPGSYLVREFARNIVTLRAF
CCCEEEEECCHHHHHEEEEEEEEEECCCCCCCEEEEEEEECHHHHHHHHHHHEEEEEEE
NDAGRKVRIAKTDKHTWQAAPVTGALTLRYDVYAWDLSVRSAYLDESGGFFNATAVFLSV
CCCCCEEEEEECCCCCEEECCCCEEEEEEEEEEEEEEEHHHHHCCCCCCEEEHEEEEEEE
AGREDAPCEVDIAKPAGAAFRTWRVGTALPEAGGTRRYGFGAYRAANYDELSDHPVTIGE
CCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHH
FALATFDAHGVPHDIVIAGRVTQLDLERLRTDLKRVCEAQIALFEPKSKKAPMDRYVFMT
HEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEE
LAVSDGYGGLEHRASTALICNRTDLPVKGRPETTEGYRTYLGLCSHEYFHTWNVKRIKPA
EEEECCCCCCHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCEEECCC
AFVPYDLTRENYTSLLWLFEGFTSYYDDLMLVRSGLMSQDDYFAALGRTIGGVLRGTGRL
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHH
KQSVAESSFDAWIKYYRQDENATNAIVSYYTKGSLVALAFDLAIRAQTRNRKSLDDVMRL
HHHHHHHHHHHHHHHHHCCCCHHHHHHEEECCCCEEEEEEEHHHEECCCCCCCHHHHHHH
LWQRYGRDFYRGKQAGVDENEVEALIEEATGVALGRLFADAVHGTRDLPLGELLAPFGVT
HHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCE
LAPDVATGAAAKPTIGARLRGGADCTLAAVYEGGAAHRAGLSAGDTLIAVDGLRVTGTNL
ECCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCCHHHCCCCCCCEEEEECCEEEECCCH
DALLARYRPGDKVEIHAFRRDELRTAKLKLDGPEVTRYRLTAAAKPAAATKAREAWLKG
HHHHHHCCCCCEEEEEEEECCCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA