Click here to switch to the map view.

The map label for this gene is ubiX [C]

Identifier: 116688531

GI number: 116688531

Start: 566564

End: 567160

Strand: Reverse

Name: ubiX [C]

Synonym: Bcen2424_0507

Alternate gene names: 116688531

Gene position: 567160-566564 (Counterclockwise)

Preceding gene: 116688532

Following gene: 116688530

Centisome position: 16.28

GC content: 67.84

Gene sequence:

>597_bases
ATGGCATCTCCCAGCGCGCCGCCGCGCCGGCTGATCGTCGCGATCACCGGCGCCACCGGCGTGATCTACGGTGTGCGGCT
GCTCGATCTGCTGCGCGCCGCCGGCGGCGTCGAAACGCATCTGCTGATTTCGAACGCCGGCTGGCTCAACATCCAGCATG
AACTGAAGCTGCCGAAGGCCGATGTCGAAAGCCGTGCGGACGTCGTGCATTCGGTGCGCGACGTCGGCGCGACGATCGCG
TCGGGCTCGTTCGCGACCGACGGCATGGTGATCGCGCCCTGCTCGATGAAGACGCTCGCGAGCGTCGCGCACGGGCTGTC
CGACAACCTGATCACCCGCGCGGCCGACGTCACGCTGAAGGAACGCCGCCGTCTCGTGCTGATGGTGCGCGAGACGCCGT
TCAACCTCGCGCATCTGCGCAACATGACCGCCGTCACCGAAATGGGCGGTATCGTCTTTCCGCCGCTGCCCGCGTTCTAC
GCGATGCCGAAGACGATCGAGGAACTCGTCGACCAGACCGTCACGCGCGTCCTCGACCTGTTCGCGCTCAGCGCGCCGCT
CACGACGCCGTGGCCCGGCATCCGGCACGCGCAGTAA

Upstream 100 bases:

>100_bases
AATTCATCGGCGGCTCGGACATCATGATGGAGATGTACCAGTCGGGCGAACTGCAGCAACTGTTCGCCGCCGCGTAACAC
GCGGCACCCGCCCCCTTTCG

Downstream 100 bases:

>100_bases
GCCACGCCTCTTCTGCGCGGATCTCCACCGATTCGCGCAGCAACTCCCTCCATTTCACGCCTTCTGATGCGACTCGGCAT
CCGAAAGCCAGCCTTCGCCG

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MASPSAPPRRLIVAITGATGVIYGVRLLDLLRAAGGVETHLLISNAGWLNIQHELKLPKADVESRADVVHSVRDVGATIA
SGSFATDGMVIAPCSMKTLASVAHGLSDNLITRAADVTLKERRRLVLMVRETPFNLAHLRNMTAVTEMGGIVFPPLPAFY
AMPKTIEELVDQTVTRVLDLFALSAPLTTPWPGIRHAQ

Sequences:

>Translated_198_residues
MASPSAPPRRLIVAITGATGVIYGVRLLDLLRAAGGVETHLLISNAGWLNIQHELKLPKADVESRADVVHSVRDVGATIA
SGSFATDGMVIAPCSMKTLASVAHGLSDNLITRAADVTLKERRRLVLMVRETPFNLAHLRNMTAVTEMGGIVFPPLPAFY
AMPKTIEELVDQTVTRVLDLFALSAPLTTPWPGIRHAQ
>Mature_197_residues
ASPSAPPRRLIVAITGATGVIYGVRLLDLLRAAGGVETHLLISNAGWLNIQHELKLPKADVESRADVVHSVRDVGATIAS
GSFATDGMVIAPCSMKTLASVAHGLSDNLITRAADVTLKERRRLVLMVRETPFNLAHLRNMTAVTEMGGIVFPPLPAFYA
MPKTIEELVDQTVTRVLDLFALSAPLTTPWPGIRHAQ

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=187, Percent_Identity=52.4064171122995, Blast_Score=202, Evalue=1e-53,
Organism=Saccharomyces cerevisiae, GI6320746, Length=195, Percent_Identity=49.7435897435897, Blast_Score=194, Evalue=7e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.- [C]

Molecular weight: Translated: 21278; Mature: 21147

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASPSAPPRRLIVAITGATGVIYGVRLLDLLRAAGGVETHLLISNAGWLNIQHELKLPKA
CCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEHCCCCCCC
DVESRADVVHSVRDVGATIASGSFATDGMVIAPCSMKTLASVAHGLSDNLITRAADVTLK
CHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHCCHH
ERRRLVLMVRETPFNLAHLRNMTAVTEMGGIVFPPLPAFYAMPKTIEELVDQTVTRVLDL
HCCEEEEEEECCCCCHHHHHHHHHHHHCCCEECCCCHHHHHCHHHHHHHHHHHHHHHHHH
FALSAPLTTPWPGIRHAQ
HHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASPSAPPRRLIVAITGATGVIYGVRLLDLLRAAGGVETHLLISNAGWLNIQHELKLPKA
CCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEHCCCCCCC
DVESRADVVHSVRDVGATIASGSFATDGMVIAPCSMKTLASVAHGLSDNLITRAADVTLK
CHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHCCHH
ERRRLVLMVRETPFNLAHLRNMTAVTEMGGIVFPPLPAFYAMPKTIEELVDQTVTRVLDL
HCCEEEEEEECCCCCHHHHHHHHHHHHCCCEECCCCHHHHHCHHHHHHHHHHHHHHHHHH
FALSAPLTTPWPGIRHAQ
HHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]