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The map label for this gene is clpV1 [H]

Identifier: 116688497

GI number: 116688497

Start: 524841

End: 527510

Strand: Direct

Name: clpV1 [H]

Synonym: Bcen2424_0473

Alternate gene names: 116688497

Gene position: 524841-527510 (Clockwise)

Preceding gene: 116688496

Following gene: 116688498

Centisome position: 15.06

GC content: 68.99

Gene sequence:

>2670_bases
ATGAGCACGCCTCTGAAGACCCTGATCACGAAACTGAACCCGCTGTGCCGCCACGCGACCGAGCGTGCGGCGAGCGCGTG
CCTGGCGCGCGGCCACTACGAGGTCGATCTGGAGCATCTGTTCCTCGCGTTGCTCGACGAAGCGACGGGCGATCTGCCGC
TCGCCTTGCGCGCGAGCCGCGTCGATCCGCATGCGCTGCACGCCGATCTCGAACGCGAGCTCACGCGCCTGAAGACGGGC
AACACGCGCACGCCGGTGTTCTCCGTGCATCTGATCGCGCTGTTCGAGCAGGCGTGGCTGATCGCGTCGCTCGATTCGCA
GCTCGGCCGCATCCGTTCCGGGCACCTGCTGCTCGCGCTGCTGACCGCGCCGGATCTCGCGCAGTTCGCGCAACGGATGT
CGTCGCGCTTCGCGGAAATGAACGTGACGGACCTGAAGCACAAGTTCGACGAAATCATGGCCGGTTCGAGCGAAGCCGAG
CCGCGCCAGGCGGACGACGACGGCAGCGACGTCGCGCCGGCCGCCGACGGCTTTGCGCCCGCGGCTGGCCCGTCGAAGAC
GCCCGCGCTCGACACCTATACGACCAACCTCACGCAGCGCGCGCGCGACGGCAAGATCGACCCGGTGATCGGCCGCGAAG
CGGAGATCCGCCAGGCGATCGACATCCTGATGCGCCGCCGCCAGAACAACCCGATCATGACCGGCGAGGCCGGCGTCGGC
AAAACGGCGGTCGTCGAAGGGCTCGCGCTGCGGATCGCGGCCGACGACGTGCCGCCGCCGCTGCGCGGCGTCGCGCTGCA
CGTGCTCGACATGGGGCTGCTGCAGGCCGGCGCGAGCGTGAAGGGCGAGTTCGAGAACCGGCTGAAGAGCGTGATCGACG
AGGTGAAGAAGAGCGCGCACCCGATCATCCTGTTCATCGACGAGGCGCACACGATCATCGGCGCGGGCGGCCAGGCCGGC
CAGAACGATGCGGCGAACCTGCTGAAGCCCGCACTCGCGCGCGGCGAGCTGCGCACGATCGCCGCGACGACGTGGAGCGA
ATACAAGAAGTACTTCGAGAAGGATGCGGCGCTCGCGCGGCGTTTCCAGGTCGTGAAGGTCGAGGAGCCGAGCGAGCCGC
TGGCCGCCGCGATGCTGCGCGGGATGTCGGGCCTGATGGAGAAGCACTTCAACGTGCGGATTCTCGACGATGCGATCACG
GAGGCCGTGCGCCTGTCGCACCGCTACATCAGCGGCCGCCAGCTGCCGGACAAGGCGATCAGCGTGCTCGATACCGCCTG
CGCGAAGGTCGCGCTCGCGCACAGCGCGACGCCGGCCGCGATCGACGATACGAAGAAGCGCATCGAGCGCATCGATGCGG
AAATCGCGTCGCTGGAGCGCGAGGCGGCGGGCGGCGCGGCGCACGACGAGCGGCTCGGCGAGCTGCGCGGCGCGCGCGAC
ACGGCGCTCGAACAACTGGCGAAGGATGAGGAACGCTACGAAGCCGAGCGCGTGATCGTCGCCGAGATCACCGAGCTGCG
CGATGCGCTCGACCGCGCACGCGGCCCGTCGGAGGACGGCCAGCCGGTCGACGTGCAGGCCACTCGCGAGAAACTCGCCG
AACGCGTCGCGGCGCTGCACGCGCTGCAGGGCGGCGAGCCGATGGTGCCGCTGCAGGTCGACGGCCACGTCGTCGCCGAG
ATCGTCGCCGCGTGGACGGGCATTCCGCTCGGCCGGATGGTGAAGGACGAGATCGACACCGTGCTGAACCTGCAGCCGCT
GCTGACCGCACGCGTGATCGGCCAGGATCATGCGCTGGAGGCGATCGCCCAGCGTGTGCGCACCGCGACCGCGAACCTCG
AGGACCCGAACAAGCCGCGCGGCGTGTTCATGTTCGTCGGGCCGTCGGGCGTCGGCAAGACCGAGACGGCGCTGGCGCTG
GCCGACATCCTGTACGGCGGCGAGCGCAAGATGGTCACGATCAACATGAGCGAGTACCAGGAAGCGCACAGCGTGTCGGG
CCTGAAGGGGTCGCCGCCGGGCTACGTCGGTTACGGCGAAGGCGGCGTGCTGACCGAGGCCGTGCGTCGCAACCCGTATT
CCGTCGTGCTGCTCGACGAGGTCGAGAAGGCGCACCCGGACGTGCTCGAGATGTTCTTCCAGGTGTTCGACAAGGGCACG
ATGGACGATGCGGAAGGGCGCGAGATCGACTTCCGCAACACGCTGATCATCCTGACGTCGAACGTCGGCTCGGCCGCGGT
AATGCAGGCCTGCCTGAACAAGCCGGCCGAGGAGCTGCCCGATCCGGACGCGCTTGCCGAGGCGCTGCGCCCGCAGCTGT
ACAAGACCTTCAAGCCGGCGTTCCTCGGCCGGATGAAGGTCGTGCCGTACTACCCGATTTCCGACGACGTGCTGGCCGAG
ATCATCGAGCTGAAGCTCGAACGCATCCGCCGCCGGATCGAGGCGAACCACAAGGCCGCGTTCGAGTGGGACGAGTCGCT
CGTCGACGCGGTGCTCGCACGCTGCACCGAGGTCGACTCGGGCGCCCGCAACGTCGACCACATCCTGAACGGCACGCTGC
TGCCGGAGATCGCGGGCCACGTGCTCGGCCGGATCGCCGACGGCGCGGCGATCGCGCGCATCGCGGTGCGCGCGGACGAG
GCCGGCGAATTCGCGTACACCGTCGAATGA

Upstream 100 bases:

>100_bases
CGCGCGATGCGCTGGAGGATCGCTCGGACGCCCGCTACGAACTGCACGTGATTCACTGAGACCCTAACAACAACACGCAA
TCGAACCTGAGATCGACGCC

Downstream 100 bases:

>100_bases
GCCCCGCACGCGACATCTCATGCATCAACGGATTCACTGAACCATGCCGATCAATCTCCCCGAGCTGCTGACACCGATCA
GCGATGCGTCGCCCAGCGGC

Product: ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 889; Mature: 888

Protein sequence:

>889_residues
MSTPLKTLITKLNPLCRHATERAASACLARGHYEVDLEHLFLALLDEATGDLPLALRASRVDPHALHADLERELTRLKTG
NTRTPVFSVHLIALFEQAWLIASLDSQLGRIRSGHLLLALLTAPDLAQFAQRMSSRFAEMNVTDLKHKFDEIMAGSSEAE
PRQADDDGSDVAPAADGFAPAAGPSKTPALDTYTTNLTQRARDGKIDPVIGREAEIRQAIDILMRRRQNNPIMTGEAGVG
KTAVVEGLALRIAADDVPPPLRGVALHVLDMGLLQAGASVKGEFENRLKSVIDEVKKSAHPIILFIDEAHTIIGAGGQAG
QNDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQVVKVEEPSEPLAAAMLRGMSGLMEKHFNVRILDDAIT
EAVRLSHRYISGRQLPDKAISVLDTACAKVALAHSATPAAIDDTKKRIERIDAEIASLEREAAGGAAHDERLGELRGARD
TALEQLAKDEERYEAERVIVAEITELRDALDRARGPSEDGQPVDVQATREKLAERVAALHALQGGEPMVPLQVDGHVVAE
IVAAWTGIPLGRMVKDEIDTVLNLQPLLTARVIGQDHALEAIAQRVRTATANLEDPNKPRGVFMFVGPSGVGKTETALAL
ADILYGGERKMVTINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFFQVFDKGT
MDDAEGREIDFRNTLIILTSNVGSAAVMQACLNKPAEELPDPDALAEALRPQLYKTFKPAFLGRMKVVPYYPISDDVLAE
IIELKLERIRRRIEANHKAAFEWDESLVDAVLARCTEVDSGARNVDHILNGTLLPEIAGHVLGRIADGAAIARIAVRADE
AGEFAYTVE

Sequences:

>Translated_889_residues
MSTPLKTLITKLNPLCRHATERAASACLARGHYEVDLEHLFLALLDEATGDLPLALRASRVDPHALHADLERELTRLKTG
NTRTPVFSVHLIALFEQAWLIASLDSQLGRIRSGHLLLALLTAPDLAQFAQRMSSRFAEMNVTDLKHKFDEIMAGSSEAE
PRQADDDGSDVAPAADGFAPAAGPSKTPALDTYTTNLTQRARDGKIDPVIGREAEIRQAIDILMRRRQNNPIMTGEAGVG
KTAVVEGLALRIAADDVPPPLRGVALHVLDMGLLQAGASVKGEFENRLKSVIDEVKKSAHPIILFIDEAHTIIGAGGQAG
QNDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQVVKVEEPSEPLAAAMLRGMSGLMEKHFNVRILDDAIT
EAVRLSHRYISGRQLPDKAISVLDTACAKVALAHSATPAAIDDTKKRIERIDAEIASLEREAAGGAAHDERLGELRGARD
TALEQLAKDEERYEAERVIVAEITELRDALDRARGPSEDGQPVDVQATREKLAERVAALHALQGGEPMVPLQVDGHVVAE
IVAAWTGIPLGRMVKDEIDTVLNLQPLLTARVIGQDHALEAIAQRVRTATANLEDPNKPRGVFMFVGPSGVGKTETALAL
ADILYGGERKMVTINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFFQVFDKGT
MDDAEGREIDFRNTLIILTSNVGSAAVMQACLNKPAEELPDPDALAEALRPQLYKTFKPAFLGRMKVVPYYPISDDVLAE
IIELKLERIRRRIEANHKAAFEWDESLVDAVLARCTEVDSGARNVDHILNGTLLPEIAGHVLGRIADGAAIARIAVRADE
AGEFAYTVE
>Mature_888_residues
STPLKTLITKLNPLCRHATERAASACLARGHYEVDLEHLFLALLDEATGDLPLALRASRVDPHALHADLERELTRLKTGN
TRTPVFSVHLIALFEQAWLIASLDSQLGRIRSGHLLLALLTAPDLAQFAQRMSSRFAEMNVTDLKHKFDEIMAGSSEAEP
RQADDDGSDVAPAADGFAPAAGPSKTPALDTYTTNLTQRARDGKIDPVIGREAEIRQAIDILMRRRQNNPIMTGEAGVGK
TAVVEGLALRIAADDVPPPLRGVALHVLDMGLLQAGASVKGEFENRLKSVIDEVKKSAHPIILFIDEAHTIIGAGGQAGQ
NDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQVVKVEEPSEPLAAAMLRGMSGLMEKHFNVRILDDAITE
AVRLSHRYISGRQLPDKAISVLDTACAKVALAHSATPAAIDDTKKRIERIDAEIASLEREAAGGAAHDERLGELRGARDT
ALEQLAKDEERYEAERVIVAEITELRDALDRARGPSEDGQPVDVQATREKLAERVAALHALQGGEPMVPLQVDGHVVAEI
VAAWTGIPLGRMVKDEIDTVLNLQPLLTARVIGQDHALEAIAQRVRTATANLEDPNKPRGVFMFVGPSGVGKTETALALA
DILYGGERKMVTINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFFQVFDKGTM
DDAEGREIDFRNTLIILTSNVGSAAVMQACLNKPAEELPDPDALAEALRPQLYKTFKPAFLGRMKVVPYYPISDDVLAEI
IELKLERIRRRIEANHKAAFEWDESLVDAVLARCTEVDSGARNVDHILNGTLLPEIAGHVLGRIADGAAIARIAVRADEA
GEFAYTVE

Specific function: Required for secretion of hcp1 probably by providing the energy source for its translocation [H]

COG id: COG0542

COG function: function code O; ATPases with chaperone activity, ATP-binding subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the clpA/clpB family [H]

Homologues:

Organism=Homo sapiens, GI13540606, Length=317, Percent_Identity=33.4384858044164, Blast_Score=172, Evalue=1e-42,
Organism=Escherichia coli, GI1788943, Length=825, Percent_Identity=39.6363636363636, Blast_Score=524, Evalue=1e-149,
Organism=Escherichia coli, GI1787109, Length=472, Percent_Identity=35.5932203389831, Blast_Score=245, Evalue=1e-65,
Organism=Saccharomyces cerevisiae, GI6320464, Length=714, Percent_Identity=39.2156862745098, Blast_Score=464, Evalue=1e-131,
Organism=Saccharomyces cerevisiae, GI6323002, Length=771, Percent_Identity=35.2788586251621, Blast_Score=457, Evalue=1e-129,

Paralogues:

None

Copy number: 560 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013093
- InterPro:   IPR003959
- InterPro:   IPR017729
- InterPro:   IPR018368
- InterPro:   IPR001270
- InterPro:   IPR019489
- InterPro:   IPR023150 [H]

Pfam domain/function: PF00004 AAA; PF07724 AAA_2; PF10431 ClpB_D2-small [H]

EC number: NA

Molecular weight: Translated: 96587; Mature: 96456

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS00870 CLPAB_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPLKTLITKLNPLCRHATERAASACLARGHYEVDLEHLFLALLDEATGDLPLALRASR
CCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHCCCCCCEEEEECC
VDPHALHADLERELTRLKTGNTRTPVFSVHLIALFEQAWLIASLDSQLGRIRSGHLLLAL
CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
LTAPDLAQFAQRMSSRFAEMNVTDLKHKFDEIMAGSSEAEPRQADDDGSDVAPAADGFAP
ECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
AAGPSKTPALDTYTTNLTQRARDGKIDPVIGREAEIRQAIDILMRRRQNNPIMTGEAGVG
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCC
KTAVVEGLALRIAADDVPPPLRGVALHVLDMGLLQAGASVKGEFENRLKSVIDEVKKSAH
HHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
PIILFIDEAHTIIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALAR
CEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
RFQVVKVEEPSEPLAAAMLRGMSGLMEKHFNVRILDDAITEAVRLSHRYISGRQLPDKAI
HEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHH
SVLDTACAKVALAHSATPAAIDDTKKRIERIDAEIASLEREAAGGAAHDERLGELRGARD
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHH
TALEQLAKDEERYEAERVIVAEITELRDALDRARGPSEDGQPVDVQATREKLAERVAALH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
ALQGGEPMVPLQVDGHVVAEIVAAWTGIPLGRMVKDEIDTVLNLQPLLTARVIGQDHALE
HHCCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHH
AIAQRVRTATANLEDPNKPRGVFMFVGPSGVGKTETALALADILYGGERKMVTINMSEYQ
HHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHH
EAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFFQVFDKGT
HHHHCCCCCCCCCCEEECCCCCHHHHHHHCCCCEEEEECCHHHCCHHHHHHHHHHHCCCC
MDDAEGREIDFRNTLIILTSNVGSAAVMQACLNKPAEELPDPDALAEALRPQLYKTFKPA
CCCCCCCEEECCCEEEEEECCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHH
FLGRMKVVPYYPISDDVLAEIIELKLERIRRRIEANHKAAFEWDESLVDAVLARCTEVDS
HHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
GARNVDHILNGTLLPEIAGHVLGRIADGAAIARIAVRADEAGEFAYTVE
CCHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHEEECCCCCCEEEEEC
>Mature Secondary Structure 
STPLKTLITKLNPLCRHATERAASACLARGHYEVDLEHLFLALLDEATGDLPLALRASR
CCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHCCCCCCEEEEECC
VDPHALHADLERELTRLKTGNTRTPVFSVHLIALFEQAWLIASLDSQLGRIRSGHLLLAL
CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
LTAPDLAQFAQRMSSRFAEMNVTDLKHKFDEIMAGSSEAEPRQADDDGSDVAPAADGFAP
ECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
AAGPSKTPALDTYTTNLTQRARDGKIDPVIGREAEIRQAIDILMRRRQNNPIMTGEAGVG
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCC
KTAVVEGLALRIAADDVPPPLRGVALHVLDMGLLQAGASVKGEFENRLKSVIDEVKKSAH
HHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
PIILFIDEAHTIIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALAR
CEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
RFQVVKVEEPSEPLAAAMLRGMSGLMEKHFNVRILDDAITEAVRLSHRYISGRQLPDKAI
HEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHH
SVLDTACAKVALAHSATPAAIDDTKKRIERIDAEIASLEREAAGGAAHDERLGELRGARD
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHH
TALEQLAKDEERYEAERVIVAEITELRDALDRARGPSEDGQPVDVQATREKLAERVAALH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
ALQGGEPMVPLQVDGHVVAEIVAAWTGIPLGRMVKDEIDTVLNLQPLLTARVIGQDHALE
HHCCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHH
AIAQRVRTATANLEDPNKPRGVFMFVGPSGVGKTETALALADILYGGERKMVTINMSEYQ
HHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHH
EAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFFQVFDKGT
HHHHCCCCCCCCCCEEECCCCCHHHHHHHCCCCEEEEECCHHHCCHHHHHHHHHHHCCCC
MDDAEGREIDFRNTLIILTSNVGSAAVMQACLNKPAEELPDPDALAEALRPQLYKTFKPA
CCCCCCCEEECCCEEEEEECCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHH
FLGRMKVVPYYPISDDVLAEIIELKLERIRRRIEANHKAAFEWDESLVDAVLARCTEVDS
HHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
GARNVDHILNGTLLPEIAGHVLGRIADGAAIARIAVRADEAGEFAYTVE
CCHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHEEECCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]