| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688485
Identifier: 116688485
GI number: 116688485
Start: 513271
End: 513846
Strand: Direct
Name: 116688485
Synonym: Bcen2424_0461
Alternate gene names: NA
Gene position: 513271-513846 (Clockwise)
Preceding gene: 116688484
Following gene: 116688486
Centisome position: 14.73
GC content: 48.09
Gene sequence:
>576_bases ATGACGAAAATCTGGACCACGGAGGCGGACTATCCGGAAAGTCGGATGGCACTCTACGATGAGGCAAAAAATCAAGTGGA TCGCTTTGATTTACAGGCGGCCACACGCCTCACAAAATCGAATCCTTTGGTATTCGATCTTCCCAAAAAGGGGGTGGCAA AGATTCAAGACTACGGTGTTATTTGGTCAAACATCTTGATTCCGCTTGTAAGTGAAGCGGTGCGTGTTGCGATTGAAGGA CTGGCGAATGACGGTGACGTACAGTTCATTCCGGCAGTTATTGAATCGGACGGAAAGGCTATTGACGGATCATACTTTCT TCTTAATCCGGTTAGAAAAGTCGATGTGATCGATCACGACGCTTCTGAGCCGATAGTGGTGAAGATTCCGGGGTTTCCTG ATGCCAAGGTTGGTTTCAAAAAGATGGTCTTGCGCTCCGATTTCTCTGCCAATGGCATTGGCAGACAATACGACTCCTTG ACATATATTGTCGTGGGAGATCGATTGGCCGAGGCTGTATTGTGTGCCACAAAGAAGGGGGTTAGATTCACCACTGGTAT TCCGCCTGCCGATTGA
Upstream 100 bases:
>100_bases CGCGGAATCATCGCGCGAGAGCGGATGGAGTTGAAAGCCGGGAACCGGATGCTCAACAAGAACCATCGACCATGGGCGTG TCCAAACTAAGTGAGGATAT
Downstream 100 bases:
>100_bases TGTCGACCAGACCGGCGGTGCCCGAGCGGGAAGCAAGATCATGTTGTTCGAGAATCGACTTCATTCGTTTATCCGTCAGA TGTTGGAGCGGGAAACAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MTKIWTTEADYPESRMALYDEAKNQVDRFDLQAATRLTKSNPLVFDLPKKGVAKIQDYGVIWSNILIPLVSEAVRVAIEG LANDGDVQFIPAVIESDGKAIDGSYFLLNPVRKVDVIDHDASEPIVVKIPGFPDAKVGFKKMVLRSDFSANGIGRQYDSL TYIVVGDRLAEAVLCATKKGVRFTTGIPPAD
Sequences:
>Translated_191_residues MTKIWTTEADYPESRMALYDEAKNQVDRFDLQAATRLTKSNPLVFDLPKKGVAKIQDYGVIWSNILIPLVSEAVRVAIEG LANDGDVQFIPAVIESDGKAIDGSYFLLNPVRKVDVIDHDASEPIVVKIPGFPDAKVGFKKMVLRSDFSANGIGRQYDSL TYIVVGDRLAEAVLCATKKGVRFTTGIPPAD >Mature_190_residues TKIWTTEADYPESRMALYDEAKNQVDRFDLQAATRLTKSNPLVFDLPKKGVAKIQDYGVIWSNILIPLVSEAVRVAIEGL ANDGDVQFIPAVIESDGKAIDGSYFLLNPVRKVDVIDHDASEPIVVKIPGFPDAKVGFKKMVLRSDFSANGIGRQYDSLT YIVVGDRLAEAVLCATKKGVRFTTGIPPAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20945; Mature: 20814
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIWTTEADYPESRMALYDEAKNQVDRFDLQAATRLTKSNPLVFDLPKKGVAKIQDYGV CCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHCCH IWSNILIPLVSEAVRVAIEGLANDGDVQFIPAVIESDGKAIDGSYFLLNPVRKVDVIDHD HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEECCCEEEECCCEEEEEECCC ASEPIVVKIPGFPDAKVGFKKMVLRSDFSANGIGRQYDSLTYIVVGDRLAEAVLCATKKG CCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHCCCC VRFTTGIPPAD CEEECCCCCCC >Mature Secondary Structure TKIWTTEADYPESRMALYDEAKNQVDRFDLQAATRLTKSNPLVFDLPKKGVAKIQDYGV CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHCCH IWSNILIPLVSEAVRVAIEGLANDGDVQFIPAVIESDGKAIDGSYFLLNPVRKVDVIDHD HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEECCCEEEECCCEEEEEECCC ASEPIVVKIPGFPDAKVGFKKMVLRSDFSANGIGRQYDSLTYIVVGDRLAEAVLCATKKG CCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHCCCC VRFTTGIPPAD CEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA