| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is thiE [H]
Identifier: 116688437
GI number: 116688437
Start: 465218
End: 466345
Strand: Direct
Name: thiE [H]
Synonym: Bcen2424_0413
Alternate gene names: 116688437
Gene position: 465218-466345 (Clockwise)
Preceding gene: 116688436
Following gene: 116688438
Centisome position: 13.35
GC content: 74.02
Gene sequence:
>1128_bases ATGAGCGCGGCGCGCTTCGCCGATGCGTTCTGGCCGCCGGCCGACGAGCTGGCCGAAGCGGCCGAGCGGATTCGCGCGCG GCTCGGCGACTGGCCCGAGGGCGCGGCGCCGTGGCGGCTCTGCGTGGCGGCGCCCGACGTGCCGGCCGATGGCGACGTGC TGATCGTGTCGGCGGGCGACCGTGCCGCGCAGGCACGCGCATCGGCCGTGTCGCGGCCTGCGTCGCCCGATGCGGTGGCG ATCGAATTCGACGAGCAGGGCGCCGTGCTGCATGCGGCGGGCGGGCGCTACGCGCTCGACGCCGCGCATCCGCTCGCGGA TGACTGGATCGCGGCGCTCGCCGCGTTCCTCGATTGCGGCTTCGCGCCGGTCGACGCGCTGGTGCTCGCGCTGGCGTGGC GCGACGGCGACGAGACGCGCGCCGCCGACGCATGGCCGGTCGATGCCGCGCGATTCCCGCGGGTGGCCGGGCTGCCGCCC GCGCCGGAACCGGCGTTCGCGCCGTGCCCCGCGCGGCTCGGCCTCTATCCGGTCGTGCCGAGCGCCGAATGGGTCGAGCG CGTGCTCGACGGCGGCGCGCGAACCGTGCAATTGCGCGTGAAAGAGGCGACGCCGGACGCGCTGCGCCGGGAAATCGCGC GTGCGGTCGCGGCCGGACGCCGCTATCCCGATGCGCGCGTGTTCATCAACGATCACTGGGAGATCGCCGCAGAAGCGGGC GCGTACGGGGTACATCTGGGCCAAGAGGACCTCGAAACGGCCGATCTGGCCGCGATCGCGGGCGCGGGCCTGCGGCTCGG ACTTTCGAGTCACGGCTATTACGAGATGTTGCGGGCGCTGCACGAGCGGCCGAGCTACCTCGCGCTCGGCCCCGTGTACG CGACCGCCACCAAGGCCGTTGCCGCGCCGCCACAGGGGCTCGCGCGGATTGCCCGCTACGCGCGCTTCGCCGGCGCGCGC GCGCCGCTCGTCGCGATCGGCGGGGTGGGGCTCGACACGCTGCCGGCGGTGCTGGCGACGGGCGTGGGCAGCGTCGCGGT GGTCAGCGCGGTCACGGGCGCGGCCGACTATCGGACGGTGCTTATTGCACTGCAGCAGTGCTTTACCGGACAATTTGACA ATCATTGA
Upstream 100 bases:
>100_bases GCGCCGCGTATCTCGCCGGTCCGATGGACGCGCGCGACACCGCGCATGCGAGCACGCCGGTCGTCGGGATGCCGTTCTGG CACCAGGACGGAGGCGGAGC
Downstream 100 bases:
>100_bases CCGCAGGGCCCGGAACGGCGTCACGACATCATTCCAATGCAGGCCCTATAATTCGGCGTTCTGCGTAAAAGGACTGTCAG CTCCGTGAGCCCCACTCCTA
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MSAARFADAFWPPADELAEAAERIRARLGDWPEGAAPWRLCVAAPDVPADGDVLIVSAGDRAAQARASAVSRPASPDAVA IEFDEQGAVLHAAGGRYALDAAHPLADDWIAALAAFLDCGFAPVDALVLALAWRDGDETRAADAWPVDAARFPRVAGLPP APEPAFAPCPARLGLYPVVPSAEWVERVLDGGARTVQLRVKEATPDALRREIARAVAAGRRYPDARVFINDHWEIAAEAG AYGVHLGQEDLETADLAAIAGAGLRLGLSSHGYYEMLRALHERPSYLALGPVYATATKAVAAPPQGLARIARYARFAGAR APLVAIGGVGLDTLPAVLATGVGSVAVVSAVTGAADYRTVLIALQQCFTGQFDNH
Sequences:
>Translated_375_residues MSAARFADAFWPPADELAEAAERIRARLGDWPEGAAPWRLCVAAPDVPADGDVLIVSAGDRAAQARASAVSRPASPDAVA IEFDEQGAVLHAAGGRYALDAAHPLADDWIAALAAFLDCGFAPVDALVLALAWRDGDETRAADAWPVDAARFPRVAGLPP APEPAFAPCPARLGLYPVVPSAEWVERVLDGGARTVQLRVKEATPDALRREIARAVAAGRRYPDARVFINDHWEIAAEAG AYGVHLGQEDLETADLAAIAGAGLRLGLSSHGYYEMLRALHERPSYLALGPVYATATKAVAAPPQGLARIARYARFAGAR APLVAIGGVGLDTLPAVLATGVGSVAVVSAVTGAADYRTVLIALQQCFTGQFDNH >Mature_374_residues SAARFADAFWPPADELAEAAERIRARLGDWPEGAAPWRLCVAAPDVPADGDVLIVSAGDRAAQARASAVSRPASPDAVAI EFDEQGAVLHAAGGRYALDAAHPLADDWIAALAAFLDCGFAPVDALVLALAWRDGDETRAADAWPVDAARFPRVAGLPPA PEPAFAPCPARLGLYPVVPSAEWVERVLDGGARTVQLRVKEATPDALRREIARAVAAGRRYPDARVFINDHWEIAAEAGA YGVHLGQEDLETADLAAIAGAGLRLGLSSHGYYEMLRALHERPSYLALGPVYATATKAVAAPPQGLARIARYARFAGARA PLVAIGGVGLDTLPAVLATGVGSVAVVSAVTGAADYRTVLIALQQCFTGQFDNH
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
Organism=Escherichia coli, GI1790426, Length=196, Percent_Identity=55.1020408163265, Blast_Score=205, Evalue=4e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 39197; Mature: 39065
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAARFADAFWPPADELAEAAERIRARLGDWPEGAAPWRLCVAAPDVPADGDVLIVSAGD CCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCC RAAQARASAVSRPASPDAVAIEFDEQGAVLHAAGGRYALDAAHPLADDWIAALAAFLDCG HHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCCEEECCCCCCHHHHHHHHHHHHHCC FAPVDALVLALAWRDGDETRAADAWPVDAARFPRVAGLPPAPEPAFAPCPARLGLYPVVP CCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHCCCEECCC SAEWVERVLDGGARTVQLRVKEATPDALRREIARAVAAGRRYPDARVFINDHWEIAAEAG CHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEECCC AYGVHLGQEDLETADLAAIAGAGLRLGLSSHGYYEMLRALHERPSYLALGPVYATATKAV CCEEECCHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHH AAPPQGLARIARYARFAGARAPLVAIGGVGLDTLPAVLATGVGSVAVVSAVTGAADYRTV CCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHCCHHHHHH LIALQQCFTGQFDNH HHHHHHHHCCCCCCC >Mature Secondary Structure SAARFADAFWPPADELAEAAERIRARLGDWPEGAAPWRLCVAAPDVPADGDVLIVSAGD CCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCC RAAQARASAVSRPASPDAVAIEFDEQGAVLHAAGGRYALDAAHPLADDWIAALAAFLDCG HHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCCEEECCCCCCHHHHHHHHHHHHHCC FAPVDALVLALAWRDGDETRAADAWPVDAARFPRVAGLPPAPEPAFAPCPARLGLYPVVP CCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHCCCEECCC SAEWVERVLDGGARTVQLRVKEATPDALRREIARAVAAGRRYPDARVFINDHWEIAAEAG CHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEECCC AYGVHLGQEDLETADLAAIAGAGLRLGLSSHGYYEMLRALHERPSYLALGPVYATATKAV CCEEECCHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHH AAPPQGLARIARYARFAGARAPLVAIGGVGLDTLPAVLATGVGSVAVVSAVTGAADYRTV CCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHCCHHHHHH LIALQQCFTGQFDNH HHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA