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The map label for this gene is ugpQ [H]

Identifier: 116688423

GI number: 116688423

Start: 445496

End: 446266

Strand: Direct

Name: ugpQ [H]

Synonym: Bcen2424_0399

Alternate gene names: 116688423

Gene position: 445496-446266 (Clockwise)

Preceding gene: 116688422

Following gene: 116688425

Centisome position: 12.79

GC content: 70.43

Gene sequence:

>771_bases
ATGATCACCCGTATCGACTGGCCCTATCCGCGTGTCGTCGCCCATCGCGGCGGCGGCACGCTCGCACCGGAGAACACGCT
GGCCGCGCTCGACGAGGGCGCGCGGCGCGGGCACCGGATGGTCGAATTCGACGCGAAACTGTCGGCCGACGACGTGACGT
TCCTGCTGCATGACGATACGGTCGACCGGACCTCGAACGGCCACGGAGCGGCGGCGGGCATGCGTTATGCGGCGCTGGCC
GCGCTCGACGCGGGCGCGTGGCGCGATGCGCGCTTCGCGGGCGAACGGATGCCGACGCTCGAGGCGGCGGCGGCGCGCTG
CCTCGCGCACGGGCTGGCCGCGAACGTCGAGATCAAGCCGTGCCCGGGGCGCGAGCGCGAAACCGGGCAGCGCGTGGCGG
CCGACGCGGCTGCGTACTGGCGCGATGCCGCCGTTGCGCCGTTGCTGTCGTCGTTCTCGTTCGAGGCGCTGCAACAGGCG
CGTGCGACGGTGCCGGCGTTGCCGCGCGGGATGCTCTACGAAGTCGTGCCGGACGACTGGCATGCGCAGGTCATCGATGC
GCTCGACTGCGTATCGTTGCATGCAGACCACACTCGGCTCGACGAATCGCTGGTGCGCGCGATCAAGGCGGCCGGCTTGC
GCATCCTGGTTTACACGGTGAACGACCTCGAACGGGCACGCGAACTCGCGCGCTGGGGTGTCGATGCCGTCTGCACGGAC
CGCATCGACCTGATCGCGCCCGATGCGCTGGACGACATCGACGTCGTCTAG

Upstream 100 bases:

>100_bases
GCGCTGGCGGCCGCGCTGCCCGCGCACCGGCTGCATTTCTTCGATCCCGAATCCGGCAAGCGCGCCGGCTGAAACCGCTG
CATTCGCCGAGAGACCGACG

Downstream 100 bases:

>100_bases
CGGCGATGGCCGCGTCCGCGTCCGGTAAAAAACCGTCGCCCGGACCGTGCCTGACGCGAAAAAACGACGCCCCGGCGCGC
TGAGCGCCGGGGCGTTTTGC

Product: cytoplasmic glycerophosphodiester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MITRIDWPYPRVVAHRGGGTLAPENTLAALDEGARRGHRMVEFDAKLSADDVTFLLHDDTVDRTSNGHGAAAGMRYAALA
ALDAGAWRDARFAGERMPTLEAAAARCLAHGLAANVEIKPCPGRERETGQRVAADAAAYWRDAAVAPLLSSFSFEALQQA
RATVPALPRGMLYEVVPDDWHAQVIDALDCVSLHADHTRLDESLVRAIKAAGLRILVYTVNDLERARELARWGVDAVCTD
RIDLIAPDALDDIDVV

Sequences:

>Translated_256_residues
MITRIDWPYPRVVAHRGGGTLAPENTLAALDEGARRGHRMVEFDAKLSADDVTFLLHDDTVDRTSNGHGAAAGMRYAALA
ALDAGAWRDARFAGERMPTLEAAAARCLAHGLAANVEIKPCPGRERETGQRVAADAAAYWRDAAVAPLLSSFSFEALQQA
RATVPALPRGMLYEVVPDDWHAQVIDALDCVSLHADHTRLDESLVRAIKAAGLRILVYTVNDLERARELARWGVDAVCTD
RIDLIAPDALDDIDVV
>Mature_256_residues
MITRIDWPYPRVVAHRGGGTLAPENTLAALDEGARRGHRMVEFDAKLSADDVTFLLHDDTVDRTSNGHGAAAGMRYAALA
ALDAGAWRDARFAGERMPTLEAAAARCLAHGLAANVEIKPCPGRERETGQRVAADAAAYWRDAAVAPLLSSFSFEALQQA
RATVPALPRGMLYEVVPDDWHAQVIDALDCVSLHADHTRLDESLVRAIKAAGLRILVYTVNDLERARELARWGVDAVCTD
RIDLIAPDALDDIDVV

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Homo sapiens, GI7706617, Length=157, Percent_Identity=32.484076433121, Blast_Score=94, Evalue=1e-19,
Organism=Escherichia coli, GI1789858, Length=243, Percent_Identity=53.0864197530864, Blast_Score=260, Evalue=6e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 27755; Mature: 27755

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITRIDWPYPRVVAHRGGGTLAPENTLAALDEGARRGHRMVEFDAKLSADDVTFLLHDDT
CCCCCCCCCHHHEEECCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEECCC
VDRTSNGHGAAAGMRYAALAALDAGAWRDARFAGERMPTLEAAAARCLAHGLAANVEIKP
CCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEC
CPGRERETGQRVAADAAAYWRDAAVAPLLSSFSFEALQQARATVPALPRGMLYEVVPDDW
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEECCCCH
HAQVIDALDCVSLHADHTRLDESLVRAIKAAGLRILVYTVNDLERARELARWGVDAVCTD
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHCCCCEECC
RIDLIAPDALDDIDVV
CHHEECCCCCCCCCCC
>Mature Secondary Structure
MITRIDWPYPRVVAHRGGGTLAPENTLAALDEGARRGHRMVEFDAKLSADDVTFLLHDDT
CCCCCCCCCHHHEEECCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEECCC
VDRTSNGHGAAAGMRYAALAALDAGAWRDARFAGERMPTLEAAAARCLAHGLAANVEIKP
CCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEC
CPGRERETGQRVAADAAAYWRDAAVAPLLSSFSFEALQQARATVPALPRGMLYEVVPDDW
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEECCCCH
HAQVIDALDCVSLHADHTRLDESLVRAIKAAGLRILVYTVNDLERARELARWGVDAVCTD
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHCCCCEECC
RIDLIAPDALDDIDVV
CHHEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2541415; 1851953; 8041620; 9278503; 3062310 [H]