Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688355

Identifier: 116688355

GI number: 116688355

Start: 375135

End: 376400

Strand: Direct

Name: 116688355

Synonym: Bcen2424_0331

Alternate gene names: NA

Gene position: 375135-376400 (Clockwise)

Preceding gene: 116688346

Following gene: 116688357

Centisome position: 10.77

GC content: 71.01

Gene sequence:

>1266_bases
ATGTCATTTCGAAGCAGTTTCGCCGCGGCCGTGCTGGGTGCGGCCGTTCTCGTGGCGCCGCTTGCGGCGTCGGCCGCACC
GGCCGGGTGGGTCGCCGCATGGGCGACCGCGCTGCAGCCGATTCCCGATCTCGCCGCGCCGCCGCCGCTTTATCGCGCCC
CCGACGTGGCCGGGCGGACCGTGCGCCAGATCGTCTACCCGACCGTGTCGGGGCGCGCCGCGCGGATTCGCGTGAGCAAT
GCATACGGTCGCGCGCCGCTGGTCGTCGAGGCCGCGAGCCTGGCGCGCGCCGGCGACGGGGCTGCGCTCGCCGGCGGTGC
GGCGGTGCCGGTTCGGTTCGGCGGCAAGGCGTCGGTGACGCTCGCACCGGGAGCGGAGCTCGAAAGCGACCCGGTGACGA
TCGGCGTGACGGCCGCGCAGCCGTATGCGATCAGTCTCCAGATGGGGCCGGACCAGCGGATGACGGTCTGGCATCGCGTA
TCGAACCAGTTCAATTACGTGTCCGCGCAGGGTGATCACGTAAGCGATCCGGGTGCCGCCGACTTCCGGACCCGTTTTAC
CCAATATGCGTGGGTGACCGAGCTCGCCGTCGAAGCCGGCTCCGCGCACGCCAGCGTAGCGGCGATCGGCGATTCGATCA
CCGACGGGCTGCGCTCCAGCGTGAACCGGAACCGCCGCTGGCCGGACGCGCTCGCGCGCCGGCTGACGGCGTCGGGCGTC
GATTCGATCGGTGTCGTGAATCTTGGCATCAGCGGGAACCGGCTGCTCAGCGATTCCGCTTGCTACGGCACGTCGCTGGC
GTCGCGATTCGAGCGCGATGCGCTGTCGCGCTCGGGCGTGAAGGCGGCGATCGTGCTGATCGGGATCAACGACATCAACT
TCGCGGAGATGCCGCCGCGCGCGGGGCTCGATTGCGATCACCCGCATACGCAGGTGACGGCCGCGTCGCTGATCGACGGC
TATCGCCGCCTGATCGAGGCGGCGCACCGGCAGGGCGTGAAGGTGTTCGGCGCGACGCTCACGCCAGCGGCGTTGCCGGC
CGGACGCGAGGCGATCCGGCTCGAGGTGAACCGGTGGATTCGCAGCGGCGGCGGGTTCGACGGCGTGGTGGACTTCGACG
CGGTGCTGCGCGACCCGGCGCGCCCAAGCGTGCTGCAACGCCGATACGATAGCGGCGACGGTATCCATCCGAGCGATGCG
GGCTACACGGCGATGGCTGGCGCGGTGCCGGTCGAGCGACTGCAGGCCGCGGTGGGCGGCAAGTGA

Upstream 100 bases:

>100_bases
GTCAGGGTGCGGTCAGGTGGGCGCAGCTACGGCTCCGCACGTGGTCTCGCGTCTTCGGCTTCTGCGGCACAATGCCCGCT
TTCCGATGAGGATTTTGCCG

Downstream 100 bases:

>100_bases
CGCGCTTCTATATATAGAGGGAAAGGTTGCCGACGGCCTGCGGGCCGACACCGCGACATCGTTCGTCGAGCCCAAAGCCT
CCGTGCGCGGCAGCGCACGG

Product: GDSL family lipase

Products: NA

Alternate protein names: Lipolytic Protein G-D-S-L Family; GDSL Family Lipase; G-D-S-L Family Lipolytic Protein; Lipolytic G-D-S-L; SGNH Hydrolase; Lipolytic; GDSL-Like Lipase/Acylhydrolase Family Protein; Lipase/Acylhydrolase; GDSL-Like Lipase/Acylhydrolase; GDSL-Like Lipase/Acylhydrolase Domain Protein; Lipid Hydrolase; GDSL-Like Protein; Lipolytic Protein; Lipolytic G-D-S-L Domain Protein; Esterase; LOW QUALITY PROTEIN Secreted Protein; Lipolytic GDSL Family; Lysophospholipase L1-Like Esterase; GDSL-Like Lipase/Acylhydrolase Exported Protein; Lysophospholipase L1 Or Related Esterase

Number of amino acids: Translated: 421; Mature: 420

Protein sequence:

>421_residues
MSFRSSFAAAVLGAAVLVAPLAASAAPAGWVAAWATALQPIPDLAAPPPLYRAPDVAGRTVRQIVYPTVSGRAARIRVSN
AYGRAPLVVEAASLARAGDGAALAGGAAVPVRFGGKASVTLAPGAELESDPVTIGVTAAQPYAISLQMGPDQRMTVWHRV
SNQFNYVSAQGDHVSDPGAADFRTRFTQYAWVTELAVEAGSAHASVAAIGDSITDGLRSSVNRNRRWPDALARRLTASGV
DSIGVVNLGISGNRLLSDSACYGTSLASRFERDALSRSGVKAAIVLIGINDINFAEMPPRAGLDCDHPHTQVTAASLIDG
YRRLIEAAHRQGVKVFGATLTPAALPAGREAIRLEVNRWIRSGGGFDGVVDFDAVLRDPARPSVLQRRYDSGDGIHPSDA
GYTAMAGAVPVERLQAAVGGK

Sequences:

>Translated_421_residues
MSFRSSFAAAVLGAAVLVAPLAASAAPAGWVAAWATALQPIPDLAAPPPLYRAPDVAGRTVRQIVYPTVSGRAARIRVSN
AYGRAPLVVEAASLARAGDGAALAGGAAVPVRFGGKASVTLAPGAELESDPVTIGVTAAQPYAISLQMGPDQRMTVWHRV
SNQFNYVSAQGDHVSDPGAADFRTRFTQYAWVTELAVEAGSAHASVAAIGDSITDGLRSSVNRNRRWPDALARRLTASGV
DSIGVVNLGISGNRLLSDSACYGTSLASRFERDALSRSGVKAAIVLIGINDINFAEMPPRAGLDCDHPHTQVTAASLIDG
YRRLIEAAHRQGVKVFGATLTPAALPAGREAIRLEVNRWIRSGGGFDGVVDFDAVLRDPARPSVLQRRYDSGDGIHPSDA
GYTAMAGAVPVERLQAAVGGK
>Mature_420_residues
SFRSSFAAAVLGAAVLVAPLAASAAPAGWVAAWATALQPIPDLAAPPPLYRAPDVAGRTVRQIVYPTVSGRAARIRVSNA
YGRAPLVVEAASLARAGDGAALAGGAAVPVRFGGKASVTLAPGAELESDPVTIGVTAAQPYAISLQMGPDQRMTVWHRVS
NQFNYVSAQGDHVSDPGAADFRTRFTQYAWVTELAVEAGSAHASVAAIGDSITDGLRSSVNRNRRWPDALARRLTASGVD
SIGVVNLGISGNRLLSDSACYGTSLASRFERDALSRSGVKAAIVLIGINDINFAEMPPRAGLDCDHPHTQVTAASLIDGY
RRLIEAAHRQGVKVFGATLTPAALPAGREAIRLEVNRWIRSGGGFDGVVDFDAVLRDPARPSVLQRRYDSGDGIHPSDAG
YTAMAGAVPVERLQAAVGGK

Specific function: Unknown

COG id: COG2755

COG function: function code E; Lysophospholipase L1 and related esterases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43788; Mature: 43657

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFRSSFAAAVLGAAVLVAPLAASAAPAGWVAAWATALQPIPDLAAPPPLYRAPDVAGRT
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH
VRQIVYPTVSGRAARIRVSNAYGRAPLVVEAASLARAGDGAALAGGAAVPVRFGGKASVT
HHHHHCCCCCCCEEEEEEECCCCCCCEEEEHHHHHCCCCCCEECCCCEEEEEECCEEEEE
LAPGAELESDPVTIGVTAAQPYAISLQMGPDQRMTVWHRVSNQFNYVSAQGDHVSDPGAA
ECCCCCCCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHCCCCEEEECCCCCCCCCCCH
DFRTRFTQYAWVTELAVEAGSAHASVAAIGDSITDGLRSSVNRNRRWPDALARRLTASGV
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
DSIGVVNLGISGNRLLSDSACYGTSLASRFERDALSRSGVKAAIVLIGINDINFAEMPPR
CCCEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCC
AGLDCDHPHTQVTAASLIDGYRRLIEAAHRQGVKVFGATLTPAALPAGREAIRLEVNRWI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHEEHHHHHHH
RSGGGFDGVVDFDAVLRDPARPSVLQRRYDSGDGIHPSDAGYTAMAGAVPVERLQAAVGG
HCCCCCCCEEEHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHCC
K
C
>Mature Secondary Structure 
SFRSSFAAAVLGAAVLVAPLAASAAPAGWVAAWATALQPIPDLAAPPPLYRAPDVAGRT
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH
VRQIVYPTVSGRAARIRVSNAYGRAPLVVEAASLARAGDGAALAGGAAVPVRFGGKASVT
HHHHHCCCCCCCEEEEEEECCCCCCCEEEEHHHHHCCCCCCEECCCCEEEEEECCEEEEE
LAPGAELESDPVTIGVTAAQPYAISLQMGPDQRMTVWHRVSNQFNYVSAQGDHVSDPGAA
ECCCCCCCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHCCCCEEEECCCCCCCCCCCH
DFRTRFTQYAWVTELAVEAGSAHASVAAIGDSITDGLRSSVNRNRRWPDALARRLTASGV
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
DSIGVVNLGISGNRLLSDSACYGTSLASRFERDALSRSGVKAAIVLIGINDINFAEMPPR
CCCEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCC
AGLDCDHPHTQVTAASLIDGYRRLIEAAHRQGVKVFGATLTPAALPAGREAIRLEVNRWI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHEEHHHHHHH
RSGGGFDGVVDFDAVLRDPARPSVLQRRYDSGDGIHPSDAGYTAMAGAVPVERLQAAVGG
HCCCCCCCEEEHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA