| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is paaC [H]
Identifier: 116688352
GI number: 116688352
Start: 372795
End: 373598
Strand: Reverse
Name: paaC [H]
Synonym: Bcen2424_0328
Alternate gene names: 116688352
Gene position: 373598-372795 (Counterclockwise)
Preceding gene: 116688353
Following gene: 116688351
Centisome position: 10.72
GC content: 67.16
Gene sequence:
>804_bases ATGACGATCACGCCCGAACACCTCTCCTACGTGCTGCGTCTCGCGGACAATGCGCTGATCCTCGGTCAGCGCAACGCCGA ATGGTGCGGCCACGGCCCGATCCTCGAGGAAGACATCGCGCTCACCAACATGAGCCTCGACCTCATCGGCCAGGCGCGCA TGCTGTATACGCACGCAGCCGAACTCGAGCGCCAGCTCACCGGCGCGACGAAGACCGAGGACGACTACGCGTACTTCCGC ACCGAGCGCGAGTTCGCGAATTTCACGCTCGCCGAGTTGCCGCACTATGGCCCCGTCTCCGGTACCGCGCACGCCGACAA GGACTACGCGGTGACGATCGTGCGCAACTTCCTGTACGCGGCGCTGATGCTGCACGTGTGGAGCGCGCTGGAAACGTCGA CCGACACGCAACTGGCCGCGATCGCCGCGAAATCGGTGAAGGAAACCCGCTATCACGTCCAGCATGCGCGCGAATGGCTC GTGCGCCTCGGCGACGGCACCGACGAATCGCACCGCCGCGCGCAGGCCGCGCTCGACTATCTGATGCCGTACACGCGCGA ATTCTTCGCCGCCGATGAAATCGACGACGCGATCGTCGCGGCGGACATCGGGCCCGCACCGGCCGCGATCGAGGCCGCGT GGCGCGCGGACGTGGGCGACGCACTCGCCGAAGCCACGCTCACGCCGCCTGCGCCCGTGAAGCATGTGACGACCGGCAAG CAGGGCGAGCACTCGGAACACATGGGCTACCTGCTCGCCGAAATGCAGAGCCTCGCGCGCCAGCACCCCGGCGCGAGCTG GTAA
Upstream 100 bases:
>100_bases GAGAAGGCCGAACTGTTCGAGCCGGCGGGCGACAAGATCTACCGTCACCCGACGTTCTATACGTTGCCCGACGAAGTCAA CCACATGTAACGCCCGCGCC
Downstream 100 bases:
>100_bases CCGGCCCACGCCACGGAGCCCGACGATGTCCGCCCAGACCGCCGCCCCTGCCTACGCCGCGCCCGCCGCGCACCACGACG ATCCGCTGCTCGCCCGCGCG
Product: phenylacetate-CoA oxygenase, PaaI subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MTITPEHLSYVLRLADNALILGQRNAEWCGHGPILEEDIALTNMSLDLIGQARMLYTHAAELERQLTGATKTEDDYAYFR TEREFANFTLAELPHYGPVSGTAHADKDYAVTIVRNFLYAALMLHVWSALETSTDTQLAAIAAKSVKETRYHVQHAREWL VRLGDGTDESHRRAQAALDYLMPYTREFFAADEIDDAIVAADIGPAPAAIEAAWRADVGDALAEATLTPPAPVKHVTTGK QGEHSEHMGYLLAEMQSLARQHPGASW
Sequences:
>Translated_267_residues MTITPEHLSYVLRLADNALILGQRNAEWCGHGPILEEDIALTNMSLDLIGQARMLYTHAAELERQLTGATKTEDDYAYFR TEREFANFTLAELPHYGPVSGTAHADKDYAVTIVRNFLYAALMLHVWSALETSTDTQLAAIAAKSVKETRYHVQHAREWL VRLGDGTDESHRRAQAALDYLMPYTREFFAADEIDDAIVAADIGPAPAAIEAAWRADVGDALAEATLTPPAPVKHVTTGK QGEHSEHMGYLLAEMQSLARQHPGASW >Mature_266_residues TITPEHLSYVLRLADNALILGQRNAEWCGHGPILEEDIALTNMSLDLIGQARMLYTHAAELERQLTGATKTEDDYAYFRT EREFANFTLAELPHYGPVSGTAHADKDYAVTIVRNFLYAALMLHVWSALETSTDTQLAAIAAKSVKETRYHVQHAREWLV RLGDGTDESHRRAQAALDYLMPYTREFFAADEIDDAIVAADIGPAPAAIEAAWRADVGDALAEATLTPPAPVKHVTTGKQ GEHSEHMGYLLAEMQSLARQHPGASW
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG3396
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787656, Length=259, Percent_Identity=44.7876447876448, Blast_Score=213, Evalue=7e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR011882 - InterPro: IPR007814 [H]
Pfam domain/function: PF05138 PaaA_PaaC [H]
EC number: NA
Molecular weight: Translated: 29512; Mature: 29381
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTITPEHLSYVLRLADNALILGQRNAEWCGHGPILEEDIALTNMSLDLIGQARMLYTHAA CCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHH ELERQLTGATKTEDDYAYFRTEREFANFTLAELPHYGPVSGTAHADKDYAVTIVRNFLYA HHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH ALMLHVWSALETSTDTQLAAIAAKSVKETRYHVQHAREWLVRLGDGTDESHRRAQAALDY HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LMPYTREFFAADEIDDAIVAADIGPAPAAIEAAWRADVGDALAEATLTPPAPVKHVTTGK HHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC QGEHSEHMGYLLAEMQSLARQHPGASW CCCCHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TITPEHLSYVLRLADNALILGQRNAEWCGHGPILEEDIALTNMSLDLIGQARMLYTHAA CCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHH ELERQLTGATKTEDDYAYFRTEREFANFTLAELPHYGPVSGTAHADKDYAVTIVRNFLYA HHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH ALMLHVWSALETSTDTQLAAIAAKSVKETRYHVQHAREWLVRLGDGTDESHRRAQAALDY HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LMPYTREFFAADEIDDAIVAADIGPAPAAIEAAWRADVGDALAEATLTPPAPVKHVTTGK HHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC QGEHSEHMGYLLAEMQSLARQHPGASW CCCCHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]