Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is yvlD [H]

Identifier: 116688297

GI number: 116688297

Start: 315477

End: 315830

Strand: Direct

Name: yvlD [H]

Synonym: Bcen2424_0273

Alternate gene names: 116688297

Gene position: 315477-315830 (Clockwise)

Preceding gene: 116688296

Following gene: 116688298

Centisome position: 9.06

GC content: 61.58

Gene sequence:

>354_bases
ATGAGCGTCATCCTCACCTGGGTCATCAACGCGCTGGCGCTGCTGATCATCACGTACCTCGTGCCGTCGATCCACATCAA
GAGCTTCGGCACCGCGCTGATCATCGCGGTCGTGCTCGGGCTGATCAACACGGTGATTCGTCCGGTGCTGATCCTGCTGA
CGCTGCCCGTCACGATCGTCACGCTCGGGGTGTTCATCCTCGTCGTGAACGCGCTGTGCTTCTGGTTCGCGTCGTCGCTG
CTGAAGGGCTTCGAGGTGTCGGGGTTCTGGTCCGCGTTCTTCGGTTCGATCCTGTACAGCATTGTGTCGTGGCTGCTGTC
CGCCCTGATCTTCGGCCAGCGCGACATCGGCTGA

Upstream 100 bases:

>100_bases
ATGTACTGATGCGCTGCCGCCGCGCCGCGCGCCCGTTGCGGGCGCGCGGCGCGGCGGCGCTCACCGATCGTACCGATCGA
CAACCGAACCGGAGCCCTCC

Downstream 100 bases:

>100_bases
GAGCTGGCGGGCGCAGGCCCAACCCCATCGAATCATGAAACCGATCGAACTCTCGTTTGAATTCTTCCCGCCGAAGACGG
CGGACGGCGTCGAAAAGCTG

Product: membrane protein of unknown function

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MSVILTWVINALALLIITYLVPSIHIKSFGTALIIAVVLGLINTVIRPVLILLTLPVTIVTLGVFILVVNALCFWFASSL
LKGFEVSGFWSAFFGSILYSIVSWLLSALIFGQRDIG

Sequences:

>Translated_117_residues
MSVILTWVINALALLIITYLVPSIHIKSFGTALIIAVVLGLINTVIRPVLILLTLPVTIVTLGVFILVVNALCFWFASSL
LKGFEVSGFWSAFFGSILYSIVSWLLSALIFGQRDIG
>Mature_116_residues
SVILTWVINALALLIITYLVPSIHIKSFGTALIIAVVLGLINTVIRPVLILLTLPVTIVTLGVFILVVNALCFWFASSLL
KGFEVSGFWSAFFGSILYSIVSWLLSALIFGQRDIG

Specific function: Unknown

COG id: COG1950

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007165 [H]

Pfam domain/function: PF04020 DUF360 [H]

EC number: NA

Molecular weight: Translated: 12739; Mature: 12608

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVILTWVINALALLIITYLVPSIHIKSFGTALIIAVVLGLINTVIRPVLILLTLPVTIV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLGVFILVVNALCFWFASSLLKGFEVSGFWSAFFGSILYSIVSWLLSALIFGQRDIG
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SVILTWVINALALLIITYLVPSIHIKSFGTALIIAVVLGLINTVIRPVLILLTLPVTIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLGVFILVVNALCFWFASSLLKGFEVSGFWSAFFGSILYSIVSWLLSALIFGQRDIG
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]