| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is flhB [H]
Identifier: 116688291
GI number: 116688291
Start: 307052
End: 308251
Strand: Direct
Name: flhB [H]
Synonym: Bcen2424_0267
Alternate gene names: 116688291
Gene position: 307052-308251 (Clockwise)
Preceding gene: 116688290
Following gene: 116688292
Centisome position: 8.81
GC content: 69.17
Gene sequence:
>1200_bases GTGGCAGACGAGAGCGATCTCGACAAGACCGAAGCCGCCACTCCCAGGCGCCGCGAGAAGGCGCGCGAGGAGGGGCAGGT CGCGCGTTCGCGCGAACTGGCTTCGTTCGCGCTGCTCGCGGCGGGGTTCTACGGCGCATGGTTGCTCGCGGGCCCGTCGG GCGCGCATCTGCAGGCGATGCTGCGCGGCGCGTTCACGTTCGATCGCGCGACCGCGTTCGACACCCACCGGATGCTGTCG GCGGCCGGCAGCGCGAGCCTCGAAGGCTTCGCCGCGTTGCTGCCGCTCCTCGCGCTCACCGGCGTCGCCGCGCTGCTCGC GCCGATGGCGCTCGGCGGCTGGCTGATTTCGCAAAAGACGTTCGAGCTGAAGTTCGACCGCCTGAACCCGATCTCGGGCC TCGGCCGGATCTTCTCGATCCAGGGGCCGATCCAGCTCGGGATGTCGATCGCGAAGACGCTGGTCGTCGGCGGGATCGGC GGCATCGCGATCTGGCGCAGCAAGGACGAACTGCTCGGCCTCGCGACGCAGCCGCTCGGCGCCGCGCTGCCCGATGCGCT GCATCTGGTCGCCGTGTGCTGCGGCACGACGGTCGCCGGGATGCTGGTCGTCGCCGGGCTCGACGTGCCTTACCAACTCT GGCAGTACAACAAGAAGTTGCGCATGACGAAGGAAGAAGTGAAGCGCGAGCATCGCGAGAACGAAGGCGATCCGCACGTG AAGGGGCGGATTCGCCAGCAGCAGCGCGCGATCGCCCGCCGCCGGATGATGGCGGCCGTGCCGAAGGCCGACGTGGTCGT CACGAACCCGACGCACTTCGCGGTCGCGCTGCAATACACGGATGGCGAGATGCGCGCGCCGAAGGTCGTCGCGAAGGGCG TGAACCTCGTCGCCGCGCGCATCCGCGAACTCGCGGCCGAGCACAACGTGCCGCTGCTCGAAGCGCCGCCGCTCGCGCGT GCGCTGTATCACAACGTCGAACTCGAGCGCGAGATCCCCGGTTCGCTGTACTCGGCGGTCGCCGAAGTGCTCGCGTGGGT CTACCAGCTCAAGCGCTTCCGTTCGGAAGGCGGCGCGTTCCCGGCGATGCCGGTCGATCTCGACGTGCCGGCCGAACTCG ACAAGGGCACGTCGGTCGCCGCCGACGACGAGCGTGAAGAAGCCGAGGACACCCTCGGCAAGCAAGGGAACGCAGCATGA
Upstream 100 bases:
>100_bases CCCCTTTCCCGGCTTTGCTCGACCGATCGGCGTTTGACGCCTCCATGAATAATCGGTGGCACTGGAAAGCGGCATTCCGC CGTACCCGACTGGAGGCCCC
Downstream 100 bases:
>100_bases GCACCCCGACCACCGGCCTGTTCGCGAAGCGCCCGAACGTGCTGGCAGGCACGAACCTGCGCGCGCTCGCGGGCCCGATC CTCATCTGCATGATCCTGGG
Product: flagellar biosynthesis protein FlhB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MADESDLDKTEAATPRRREKAREEGQVARSRELASFALLAAGFYGAWLLAGPSGAHLQAMLRGAFTFDRATAFDTHRMLS AAGSASLEGFAALLPLLALTGVAALLAPMALGGWLISQKTFELKFDRLNPISGLGRIFSIQGPIQLGMSIAKTLVVGGIG GIAIWRSKDELLGLATQPLGAALPDALHLVAVCCGTTVAGMLVVAGLDVPYQLWQYNKKLRMTKEEVKREHRENEGDPHV KGRIRQQQRAIARRRMMAAVPKADVVVTNPTHFAVALQYTDGEMRAPKVVAKGVNLVAARIRELAAEHNVPLLEAPPLAR ALYHNVELEREIPGSLYSAVAEVLAWVYQLKRFRSEGGAFPAMPVDLDVPAELDKGTSVAADDEREEAEDTLGKQGNAA
Sequences:
>Translated_399_residues MADESDLDKTEAATPRRREKAREEGQVARSRELASFALLAAGFYGAWLLAGPSGAHLQAMLRGAFTFDRATAFDTHRMLS AAGSASLEGFAALLPLLALTGVAALLAPMALGGWLISQKTFELKFDRLNPISGLGRIFSIQGPIQLGMSIAKTLVVGGIG GIAIWRSKDELLGLATQPLGAALPDALHLVAVCCGTTVAGMLVVAGLDVPYQLWQYNKKLRMTKEEVKREHRENEGDPHV KGRIRQQQRAIARRRMMAAVPKADVVVTNPTHFAVALQYTDGEMRAPKVVAKGVNLVAARIRELAAEHNVPLLEAPPLAR ALYHNVELEREIPGSLYSAVAEVLAWVYQLKRFRSEGGAFPAMPVDLDVPAELDKGTSVAADDEREEAEDTLGKQGNAA >Mature_398_residues ADESDLDKTEAATPRRREKAREEGQVARSRELASFALLAAGFYGAWLLAGPSGAHLQAMLRGAFTFDRATAFDTHRMLSA AGSASLEGFAALLPLLALTGVAALLAPMALGGWLISQKTFELKFDRLNPISGLGRIFSIQGPIQLGMSIAKTLVVGGIGG IAIWRSKDELLGLATQPLGAALPDALHLVAVCCGTTVAGMLVVAGLDVPYQLWQYNKKLRMTKEEVKREHRENEGDPHVK GRIRQQQRAIARRRMMAAVPKADVVVTNPTHFAVALQYTDGEMRAPKVVAKGVNLVAARIRELAAEHNVPLLEAPPLARA LYHNVELEREIPGSLYSAVAEVLAWVYQLKRFRSEGGAFPAMPVDLDVPAELDKGTSVAADDEREEAEDTLGKQGNAA
Specific function: Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with fliI and fliH, may constitute the export apparatus of flagellin [H]
COG id: COG1377
COG function: function code NU; Flagellar biosynthesis pathway, component FlhB
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type III secretion exporter family [H]
Homologues:
Organism=Escherichia coli, GI1788188, Length=374, Percent_Identity=49.7326203208556, Blast_Score=332, Evalue=2e-92,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006136 - InterPro: IPR006135 [H]
Pfam domain/function: PF01312 Bac_export_2 [H]
EC number: NA
Molecular weight: Translated: 42998; Mature: 42867
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADESDLDKTEAATPRRREKAREEGQVARSRELASFALLAAGFYGAWLLAGPSGAHLQAM CCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHH LRGAFTFDRATAFDTHRMLSAAGSASLEGFAALLPLLALTGVAALLAPMALGGWLISQKT HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCE FELKFDRLNPISGLGRIFSIQGPIQLGMSIAKTLVVGGIGGIAIWRSKDELLGLATQPLG EEEEECCCCCHHHCCHHEEECCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHCCCCC AALPDALHLVAVCCGTTVAGMLVVAGLDVPYQLWQYNKKLRMTKEEVKREHRENEGDPHV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHCCHHHHHHHHCCCCCCCHH KGRIRQQQRAIARRRMMAAVPKADVVVTNPTHFAVALQYTDGEMRAPKVVAKGVNLVAAR HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEEECCCCCCCCHHHHHHHHHHHHH IRELAAEHNVPLLEAPPLARALYHNVELEREIPGSLYSAVAEVLAWVYQLKRFRSEGGAF HHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC PAMPVDLDVPAELDKGTSVAADDEREEAEDTLGKQGNAA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure ADESDLDKTEAATPRRREKAREEGQVARSRELASFALLAAGFYGAWLLAGPSGAHLQAM CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHH LRGAFTFDRATAFDTHRMLSAAGSASLEGFAALLPLLALTGVAALLAPMALGGWLISQKT HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCE FELKFDRLNPISGLGRIFSIQGPIQLGMSIAKTLVVGGIGGIAIWRSKDELLGLATQPLG EEEEECCCCCHHHCCHHEEECCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHCCCCC AALPDALHLVAVCCGTTVAGMLVVAGLDVPYQLWQYNKKLRMTKEEVKREHRENEGDPHV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHCCHHHHHHHHCCCCCCCHH KGRIRQQQRAIARRRMMAAVPKADVVVTNPTHFAVALQYTDGEMRAPKVVAKGVNLVAAR HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEEECCCCCCCCHHHHHHHHHHHHH IRELAAEHNVPLLEAPPLARALYHNVELEREIPGSLYSAVAEVLAWVYQLKRFRSEGGAF HHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC PAMPVDLDVPAELDKGTSVAADDEREEAEDTLGKQGNAA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8002587; 11677609; 3298217 [H]