| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is cheW [H]
Identifier: 116688281
GI number: 116688281
Start: 297380
End: 297913
Strand: Direct
Name: cheW [H]
Synonym: Bcen2424_0257
Alternate gene names: 116688281
Gene position: 297380-297913 (Clockwise)
Preceding gene: 116688280
Following gene: 116688282
Centisome position: 8.54
GC content: 63.67
Gene sequence:
>534_bases GTGTCTGCTGAAGTCCAAATGATCAATCCGGCCGCGGCGAATGCCGCGACGAGCCGCCGCGACGCGGCGCACGGCGATGC GACGGGCCAGGAATTCCTCGTGTTCACGCTCGGCGACGAGGAATACGGGATCGACATCCTGAAAGTGCAGGAAATCCGCG GCTACGACAGCGTCACGCGCATCGCGAACGCGCCCGAGTTCATCAAGGGCGTGATCAACCTGCGCGGGATCATCGTGCCG ATCGTCGACATGCGGATCAAGTTCCACCTCGGCCGCGTCGAGTACGACCACCAGACCGTCGTGATCATCCTGAACGTGTC GAACCGCGTGGTCGGGATGGTGGTCGACGGCGTGTCGGACGTGCTGACGCTGCAGACCGACCAGATCATGCCGGCGCCGG AATTCGGCGCGACGCTGACGACCGAGTACCTGACGGGCCTCGGCACGGTCGACGGCCGGATGCTGATCCTGATGGACATC GAGAAGCTGATGTCGAGCCGTGAAATGGCGCTGATCGAGACACTCGGCGGGTAA
Upstream 100 bases:
>100_bases CGCGGCGCTGAACCGCGAAACCCGTGCGACGCACGGCGCCCGAGCCGGCGCCGAGCTCGCCGTCTTCTGACTCTCGCCAT TCAACCGATTGGGGGCAAAC
Downstream 100 bases:
>100_bases GCGCGCCGCGCGCGCAGCAATTTCGGGAGAATCTGCAATGTTGCATAACTGGTCGATCCGCACGACGCTCACGGCGGTCG GACTCATCCTCGTGTGCCTG
Product: CheW protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MSAEVQMINPAAANAATSRRDAAHGDATGQEFLVFTLGDEEYGIDILKVQEIRGYDSVTRIANAPEFIKGVINLRGIIVP IVDMRIKFHLGRVEYDHQTVVIILNVSNRVVGMVVDGVSDVLTLQTDQIMPAPEFGATLTTEYLTGLGTVDGRMLILMDI EKLMSSREMALIETLGG
Sequences:
>Translated_177_residues MSAEVQMINPAAANAATSRRDAAHGDATGQEFLVFTLGDEEYGIDILKVQEIRGYDSVTRIANAPEFIKGVINLRGIIVP IVDMRIKFHLGRVEYDHQTVVIILNVSNRVVGMVVDGVSDVLTLQTDQIMPAPEFGATLTTEYLTGLGTVDGRMLILMDI EKLMSSREMALIETLGG >Mature_176_residues SAEVQMINPAAANAATSRRDAAHGDATGQEFLVFTLGDEEYGIDILKVQEIRGYDSVTRIANAPEFIKGVINLRGIIVPI VDMRIKFHLGRVEYDHQTVVIILNVSNRVVGMVVDGVSDVLTLQTDQIMPAPEFGATLTTEYLTGLGTVDGRMLILMDIE KLMSSREMALIETLGG
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. It physically bridges CheA to the MCPs (methyl-accepting chemotaxis proteins) to allow regulated phosphotransfer to CheY and CheB [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=149, Percent_Identity=71.8120805369127, Blast_Score=220, Evalue=4e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 19294; Mature: 19162
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAEVQMINPAAANAATSRRDAAHGDATGQEFLVFTLGDEEYGIDILKVQEIRGYDSVTR CCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCHHHHH IANAPEFIKGVINLRGIIVPIVDMRIKFHLGRVEYDHQTVVIILNVSNRVVGMVVDGVSD HCCCHHHHHHHHHHCEEEEEEEEEEEEEEECEEEECCCEEEEEEECCCCEEEEEECCCHH VLTLQTDQIMPAPEFGATLTTEYLTGLGTVDGRMLILMDIEKLMSSREMALIETLGG EEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEEHHHHHCCCCEEEEEECCC >Mature Secondary Structure SAEVQMINPAAANAATSRRDAAHGDATGQEFLVFTLGDEEYGIDILKVQEIRGYDSVTR CCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCHHHHH IANAPEFIKGVINLRGIIVPIVDMRIKFHLGRVEYDHQTVVIILNVSNRVVGMVVDGVSD HCCCHHHHHHHHHHCEEEEEEEEEEEEEEECEEEECCCEEEEEEECCCCEEEEEECCCHH VLTLQTDQIMPAPEFGATLTTEYLTGLGTVDGRMLILMDIEKLMSSREMALIETLGG EEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEEHHHHHCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]