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The map label for this gene is 116688273

Identifier: 116688273

GI number: 116688273

Start: 289464

End: 289760

Strand: Direct

Name: 116688273

Synonym: Bcen2424_0249

Alternate gene names: NA

Gene position: 289464-289760 (Clockwise)

Preceding gene: 116688271

Following gene: 116688275

Centisome position: 8.31

GC content: 64.98

Gene sequence:

>297_bases
ATGTCTCAATACGCGAAACTCAAGGCGCAGATCGCCGATCTGCAGGCCCAGGCGGACGACGTGCGCCGCCAGGAAGTGGC
AGCGGTGATCGCCGATGTCCAGCGAATGATTGCCGAATATGGCCTGACGGCCCAGGACCTGGGCTTCGCGGAACGGGCGC
GGCGCGGGCGTCCGCCGAAGAAGGCGCCGTTGCCGCCGAAATACCGCGATCCGAAGTCGGGTGCCACCTGGAGTGGGCGC
GGCAAGCCGCCGAATTGGATCGTCGGCAAAAACCGCGATCGTTTCCTGATCGAGTGA

Upstream 100 bases:

>100_bases
TTAATTTCGAAGGGCAGGGCGGCAGTGCGGATGACGTAACGGACGTTGGTGTCCCGGCCGGATTCGCCGGGGCCGCATCA
TCGAAAAGGGGAGTCGAAAA

Downstream 100 bases:

>100_bases
CCGAAGGCCAAATGGAAAGAGCCGCATCGACGATGCGGCTCTTTTGCTTTGCGGGTTTTGCGCGCCGATTTCGGCGCGGA
TTTACGGCCTATTTCCGCGC

Product: histone family protein nucleoid-structuring protein H-NS

Products: NA

Alternate protein names: H-NS Histone Family Protein; Histone-Like Nucleoid-Structuring Protein H-NS; H-NS-Like Proteins; Histone-Like Nucleoid-Structuring Protein H-Ns; HNS-Like Transcriptional Regulator; H-NS-Like Transcription Regulator

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MSQYAKLKAQIADLQAQADDVRRQEVAAVIADVQRMIAEYGLTAQDLGFAERARRGRPPKKAPLPPKYRDPKSGATWSGR
GKPPNWIVGKNRDRFLIE

Sequences:

>Translated_98_residues
MSQYAKLKAQIADLQAQADDVRRQEVAAVIADVQRMIAEYGLTAQDLGFAERARRGRPPKKAPLPPKYRDPKSGATWSGR
GKPPNWIVGKNRDRFLIE
>Mature_97_residues
SQYAKLKAQIADLQAQADDVRRQEVAAVIADVQRMIAEYGLTAQDLGFAERARRGRPPKKAPLPPKYRDPKSGATWSGRG
KPPNWIVGKNRDRFLIE

Specific function: Unknown

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11003; Mature: 10872

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQYAKLKAQIADLQAQADDVRRQEVAAVIADVQRMIAEYGLTAQDLGFAERARRGRPPK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHCCCCCC
KAPLPPKYRDPKSGATWSGRGKPPNWIVGKNRDRFLIE
CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEECC
>Mature Secondary Structure 
SQYAKLKAQIADLQAQADDVRRQEVAAVIADVQRMIAEYGLTAQDLGFAERARRGRPPK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHCCCCCC
KAPLPPKYRDPKSGATWSGRGKPPNWIVGKNRDRFLIE
CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA