Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688252

Identifier: 116688252

GI number: 116688252

Start: 264588

End: 264992

Strand: Direct

Name: 116688252

Synonym: Bcen2424_0228

Alternate gene names: NA

Gene position: 264588-264992 (Clockwise)

Preceding gene: 116688251

Following gene: 116688253

Centisome position: 7.59

GC content: 54.32

Gene sequence:

>405_bases
ATGAATATAACGAAGAAACCCGAGCCATTCGACCATCTAGCTGACGCCTTGGAGCGTGAGCTCCTGAACATGTCCGACGA
AGACGTCCTTGAAGGAAGAAACGGGGATGCGGCGAAGGCAAATGGGTTGAGGCTACTGAAAGCTGCAAAGGCCACCGCTG
GCAAACAACGGCTGGCTGCGGCCAAGGAGGCCGTAGCGTTGGCTCGTAGCGGGGTTTTATCTGTCCCGCTCGAAGTCAAG
TTGGATGACATCAAAGCCTATATACGGAACGCGTCGAATGATGGCCGATATACACTAGCCGCGCGAAGTCTGGACGAGAT
GACCGAGTCCGACTTGCGACGAATCTATGCCCAGCTTAAGAGGCTAGAGTCCTCTCTGGACTCAAACGAGGATGACGGTC
AATGA

Upstream 100 bases:

>100_bases
GAAGCGGCCGCCGAATTGGGTTGGGACCAGAAGCGCTTTGACGCGGCGAGAAAGCGCCTGCTGCGTCGGCTCGCACCTCA
CGATAGGCAGGGGTGAAGCA

Downstream 100 bases:

>100_bases
GTCCGGGTGAGCGAGCTGAAAACCTCATAGCAGAGTTTGGTATTACCTCGCCTGACGAGTTGGATGTTAGGGCTTTCGCC
TACGACGCCGGTCTCGAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MNITKKPEPFDHLADALERELLNMSDEDVLEGRNGDAAKANGLRLLKAAKATAGKQRLAAAKEAVALARSGVLSVPLEVK
LDDIKAYIRNASNDGRYTLAARSLDEMTESDLRRIYAQLKRLESSLDSNEDDGQ

Sequences:

>Translated_134_residues
MNITKKPEPFDHLADALERELLNMSDEDVLEGRNGDAAKANGLRLLKAAKATAGKQRLAAAKEAVALARSGVLSVPLEVK
LDDIKAYIRNASNDGRYTLAARSLDEMTESDLRRIYAQLKRLESSLDSNEDDGQ
>Mature_134_residues
MNITKKPEPFDHLADALERELLNMSDEDVLEGRNGDAAKANGLRLLKAAKATAGKQRLAAAKEAVALARSGVLSVPLEVK
LDDIKAYIRNASNDGRYTLAARSLDEMTESDLRRIYAQLKRLESSLDSNEDDGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14684; Mature: 14684

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNITKKPEPFDHLADALERELLNMSDEDVLEGRNGDAAKANGLRLLKAAKATAGKQRLAA
CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AKEAVALARSGVLSVPLEVKLDDIKAYIRNASNDGRYTLAARSLDEMTESDLRRIYAQLK
HHHHHHHHHCCCEECCCEEHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH
RLESSLDSNEDDGQ
HHHHHHCCCCCCCC
>Mature Secondary Structure
MNITKKPEPFDHLADALERELLNMSDEDVLEGRNGDAAKANGLRLLKAAKATAGKQRLAA
CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AKEAVALARSGVLSVPLEVKLDDIKAYIRNASNDGRYTLAARSLDEMTESDLRRIYAQLK
HHHHHHHHHCCCEECCCEEHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH
RLESSLDSNEDDGQ
HHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA