Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688247

Identifier: 116688247

GI number: 116688247

Start: 257099

End: 258208

Strand: Reverse

Name: 116688247

Synonym: Bcen2424_0223

Alternate gene names: NA

Gene position: 258208-257099 (Counterclockwise)

Preceding gene: 116688248

Following gene: 116688246

Centisome position: 7.41

GC content: 57.21

Gene sequence:

>1110_bases
GTGAGAGACCCCAAACCGCGCCTGACCAAGACGGCAGCGGCATCGAGTGGTACGCCCGCGAGCAACCCGCTCTACGTGTC
TCAGCGGGAGAAAGCCGGCGCTGCTACCTTCGACCGCTTCAACTTCCAGTACGACTGGGCGCTTTATGAGTTCCTGGAGC
AGCACAAGCTCAATCAGGTGAGCATCGTATTCGTCGAGTTTCACGAAGACGTCGTCTTCAGCTCTTCTCTGGACGCTGCC
GACGCCAGATTCGTGTTCTGCCAAGTTAAGGCCGGTGCGAGCGCGAACTTCAACAAGAAATCGCTCGTCAAACGAATAAA
GCAGAAGCCATCAGTGCTTGGGAAAATGTTCACAAGCGTGGGCGACAAGAAAATTGCCGCCCGGGTGGACAAGGTTCGGC
TTGTGGCAACCGGGGGTTTCAAGCTTGAGTTAGCAGAAAAAGGCTTTCAACTCGAAGAAATCCCATGGGATGCGCTGCAC
CAAGAGACAGCGAACGAGATAAGCGCAGCTCTCGCGGCGGAACTCGGGACTGACTGCGCGCTGGAAAAGCTCCATTTCCA
TAAGCCACAGCTTCCCGAACTGCAACACCGCAGAGCCGTCATCGGGCTGATAGCCGACCTTATCAGTGAACGGGTCCCGA
ATGGAGGCGGAGACTGCCAGGCCATTTACCATGTTCTGCAAGACGAACTCCGCCGGAAGGGTGTCCATACCTGGGACTAT
TCCGACTGGGAAAGTCTTGTCCGCAACAAGGGCCTCACTGGCCAACGAGTGGACGCACTGTTCGAACAGTTTGCGTCGTC
CGCCACGGTCGACGACCTCCTCTCGGACTTTGAGTACGCGACGGCTCAGCTCCAATACGAACCGAGAGAACGGCGAAAAC
TCCGGCAGTCCGCTCGGACTTACGTCCTGAACACTCTTGACGGCGGGTCTCTCGCACATCTGCAGGTACGAGCTGCGGTG
TCAAGACATTTGCAGGCCGACTTCCCGCTAAGGCTGACCACTGACCTGTTGACGAGCCTCGTAGCGGCATCCCCGGATGT
CGTGCGTGAACACCTTGTCGACGAAACCTCGTTGGTCGCCGCATACATCATTGAATACCTGCGAGCCTGA

Upstream 100 bases:

>100_bases
TTCTGGTGGAGCAACGAGCTTCTGTACGGTTGCACGAAGGCAGTTCGCCTCATGTGCGCAGTCGCTATAATCAGTTCAAA
TTTCGAGCCCGAACACTATC

Downstream 100 bases:

>100_bases
AATGGCCCTTCCGAACTATAAACTGCTCGTCAGAAAGCTACGTACCAAAGCCTATGAGCGCATTGATATTCAAGCAACTG
TTCGTTCAATCGACTTCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MRDPKPRLTKTAAASSGTPASNPLYVSQREKAGAATFDRFNFQYDWALYEFLEQHKLNQVSIVFVEFHEDVVFSSSLDAA
DARFVFCQVKAGASANFNKKSLVKRIKQKPSVLGKMFTSVGDKKIAARVDKVRLVATGGFKLELAEKGFQLEEIPWDALH
QETANEISAALAAELGTDCALEKLHFHKPQLPELQHRRAVIGLIADLISERVPNGGGDCQAIYHVLQDELRRKGVHTWDY
SDWESLVRNKGLTGQRVDALFEQFASSATVDDLLSDFEYATAQLQYEPRERRKLRQSARTYVLNTLDGGSLAHLQVRAAV
SRHLQADFPLRLTTDLLTSLVAASPDVVREHLVDETSLVAAYIIEYLRA

Sequences:

>Translated_369_residues
MRDPKPRLTKTAAASSGTPASNPLYVSQREKAGAATFDRFNFQYDWALYEFLEQHKLNQVSIVFVEFHEDVVFSSSLDAA
DARFVFCQVKAGASANFNKKSLVKRIKQKPSVLGKMFTSVGDKKIAARVDKVRLVATGGFKLELAEKGFQLEEIPWDALH
QETANEISAALAAELGTDCALEKLHFHKPQLPELQHRRAVIGLIADLISERVPNGGGDCQAIYHVLQDELRRKGVHTWDY
SDWESLVRNKGLTGQRVDALFEQFASSATVDDLLSDFEYATAQLQYEPRERRKLRQSARTYVLNTLDGGSLAHLQVRAAV
SRHLQADFPLRLTTDLLTSLVAASPDVVREHLVDETSLVAAYIIEYLRA
>Mature_369_residues
MRDPKPRLTKTAAASSGTPASNPLYVSQREKAGAATFDRFNFQYDWALYEFLEQHKLNQVSIVFVEFHEDVVFSSSLDAA
DARFVFCQVKAGASANFNKKSLVKRIKQKPSVLGKMFTSVGDKKIAARVDKVRLVATGGFKLELAEKGFQLEEIPWDALH
QETANEISAALAAELGTDCALEKLHFHKPQLPELQHRRAVIGLIADLISERVPNGGGDCQAIYHVLQDELRRKGVHTWDY
SDWESLVRNKGLTGQRVDALFEQFASSATVDDLLSDFEYATAQLQYEPRERRKLRQSARTYVLNTLDGGSLAHLQVRAAV
SRHLQADFPLRLTTDLLTSLVAASPDVVREHLVDETSLVAAYIIEYLRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41274; Mature: 41274

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDPKPRLTKTAAASSGTPASNPLYVSQREKAGAATFDRFNFQYDWALYEFLEQHKLNQV
CCCCCCCHHHHHCCCCCCCCCCCEEEECCCCCCCCHHHHCCCEEHHHHHHHHHHCCCCCE
SIVFVEFHEDVVFSSSLDAADARFVFCQVKAGASANFNKKSLVKRIKQKPSVLGKMFTSV
EEEEEEECCCHHCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
GDKKIAARVDKVRLVATGGFKLELAEKGFQLEEIPWDALHQETANEISAALAAELGTDCA
CCHHHHHHHHHEEEEEECCEEEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
LEKLHFHKPQLPELQHRRAVIGLIADLISERVPNGGGDCQAIYHVLQDELRRKGVHTWDY
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
SDWESLVRNKGLTGQRVDALFEQFASSATVDDLLSDFEYATAQLQYEPRERRKLRQSART
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECHHHHHHHHHHHHH
YVLNTLDGGSLAHLQVRAAVSRHLQADFPLRLTTDLLTSLVAASPDVVREHLVDETSLVA
HEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
AYIIEYLRA
HHHHHHHCC
>Mature Secondary Structure
MRDPKPRLTKTAAASSGTPASNPLYVSQREKAGAATFDRFNFQYDWALYEFLEQHKLNQV
CCCCCCCHHHHHCCCCCCCCCCCEEEECCCCCCCCHHHHCCCEEHHHHHHHHHHCCCCCE
SIVFVEFHEDVVFSSSLDAADARFVFCQVKAGASANFNKKSLVKRIKQKPSVLGKMFTSV
EEEEEEECCCHHCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
GDKKIAARVDKVRLVATGGFKLELAEKGFQLEEIPWDALHQETANEISAALAAELGTDCA
CCHHHHHHHHHEEEEEECCEEEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
LEKLHFHKPQLPELQHRRAVIGLIADLISERVPNGGGDCQAIYHVLQDELRRKGVHTWDY
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
SDWESLVRNKGLTGQRVDALFEQFASSATVDDLLSDFEYATAQLQYEPRERRKLRQSART
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECHHHHHHHHHHHHH
YVLNTLDGGSLAHLQVRAAVSRHLQADFPLRLTTDLLTSLVAASPDVVREHLVDETSLVA
HEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
AYIIEYLRA
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA