Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116688243

Identifier: 116688243

GI number: 116688243

Start: 248036

End: 248614

Strand: Direct

Name: 116688243

Synonym: Bcen2424_0219

Alternate gene names: NA

Gene position: 248036-248614 (Clockwise)

Preceding gene: 116688241

Following gene: 116688244

Centisome position: 7.12

GC content: 56.3

Gene sequence:

>579_bases
ATGTCTGCGGAGCTGCGCGAGATGGTCGAACAGGTATTGTGTGACGCAGGGGTATCCATCCAGTCCGACAAGACGTTCGA
GTCAGCACTTCGTAGCTACCACGAGCTGGTGCAAAAGCGCCTTGCGCAGCGGTTTCCGCAAGCTACAGTGGCAGACCAAG
TACGCGCCGTTCGCCAGTCGATGGTGGAACTTGATGCTAGCTTGGAACGCAGATTGCCTACCTTGCAGGCGATGCGCCAC
TGGATTGACTTAGGGCGCTCTCCCGACACCCCCTTCGAGCAATTAAGGCCGCAAGCGCCAAATCGCGAAGATGTATTCAA
AGCCTTCGCGGAGGTGCTCGGCTTTTCCACACTTGAAGCTGCCTATCATTGGCAGCGTGTCATCACGGCTGTCCGCACCT
CGCGCCGGCTAGACGGACGCCATGTTTCCGACATCTACGCATACATGCTCTTGCAGCCCGAGTCGGTTATGGCTCATTCC
AGCATCAGAAGGAAGACGCTTCAACAGTTGTTCGACAAGGCACGTGAGAACGTTGCTACCGTCGAAATCGTTGGCCCCCT
GAAGGAGTCGAAAGAATGA

Upstream 100 bases:

>100_bases
GGACATGTACATCTATGAGCCGGCTTCGCAACATGCCACTGAAGCGGGATTCAGGACGTGTCAGGTACGCTCTTTGGAAG
TCGGAGACAGGGTCTTCCTG

Downstream 100 bases:

>100_bases
GCCAGTCTGTTTTGCGCGCTGACCCTGCGAAAATCTCCCCCACGCTGAAGGAGGCGGTGGTCGACAGTCTCCTCAACTTG
ACTTATGCGCAACTCAGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MSAELREMVEQVLCDAGVSIQSDKTFESALRSYHELVQKRLAQRFPQATVADQVRAVRQSMVELDASLERRLPTLQAMRH
WIDLGRSPDTPFEQLRPQAPNREDVFKAFAEVLGFSTLEAAYHWQRVITAVRTSRRLDGRHVSDIYAYMLLQPESVMAHS
SIRRKTLQQLFDKARENVATVEIVGPLKESKE

Sequences:

>Translated_192_residues
MSAELREMVEQVLCDAGVSIQSDKTFESALRSYHELVQKRLAQRFPQATVADQVRAVRQSMVELDASLERRLPTLQAMRH
WIDLGRSPDTPFEQLRPQAPNREDVFKAFAEVLGFSTLEAAYHWQRVITAVRTSRRLDGRHVSDIYAYMLLQPESVMAHS
SIRRKTLQQLFDKARENVATVEIVGPLKESKE
>Mature_191_residues
SAELREMVEQVLCDAGVSIQSDKTFESALRSYHELVQKRLAQRFPQATVADQVRAVRQSMVELDASLERRLPTLQAMRHW
IDLGRSPDTPFEQLRPQAPNREDVFKAFAEVLGFSTLEAAYHWQRVITAVRTSRRLDGRHVSDIYAYMLLQPESVMAHSS
IRRKTLQQLFDKARENVATVEIVGPLKESKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22052; Mature: 21921

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAELREMVEQVLCDAGVSIQSDKTFESALRSYHELVQKRLAQRFPQATVADQVRAVRQS
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
MVELDASLERRLPTLQAMRHWIDLGRSPDTPFEQLRPQAPNREDVFKAFAEVLGFSTLEA
HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCHHHHHH
AYHWQRVITAVRTSRRLDGRHVSDIYAYMLLQPESVMAHSSIRRKTLQQLFDKARENVAT
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCH
VEIVGPLKESKE
HHEECCHHCCCC
>Mature Secondary Structure 
SAELREMVEQVLCDAGVSIQSDKTFESALRSYHELVQKRLAQRFPQATVADQVRAVRQS
CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
MVELDASLERRLPTLQAMRHWIDLGRSPDTPFEQLRPQAPNREDVFKAFAEVLGFSTLEA
HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCHHHHHH
AYHWQRVITAVRTSRRLDGRHVSDIYAYMLLQPESVMAHSSIRRKTLQQLFDKARENVAT
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCH
VEIVGPLKESKE
HHEECCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA