| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688235
Identifier: 116688235
GI number: 116688235
Start: 235376
End: 236446
Strand: Reverse
Name: 116688235
Synonym: Bcen2424_0211
Alternate gene names: NA
Gene position: 236446-235376 (Counterclockwise)
Preceding gene: 116688236
Following gene: 116688234
Centisome position: 6.79
GC content: 57.24
Gene sequence:
>1071_bases TTGGACTGGAGGTTGACCATGATTACGCGCGAACAGGCCATCACCGGCTCGCCCGAGGACAAGGCCGCATACATGAAGGC AACCTGCGTTCCGCACCGAAATCTCGATGCGGTGATGCATGAAGTGCGCAGCCGCATGACTGCAGGTGCCGGTCTTTCCA TCACGCTGGTCGTGGGCCCGCCTGGAGTGGGGAAGACGACCTTTGGCCGCAAGCAGTTGCAAAGCCTCTTGTCCAGGTAT CCGATACAGCTTCAGGAGAAGCGCCACATCATTCCGGCCGTGATGAGCGAGGTCGATGCCGCTGACAGAGGCGAATTCAA TTTCAACCTTCTCTACAACCGCCTCTGTGCAGACCTGATGGCGCCCAGCTCTTTGGATGGACCCGTGTTGCTCGAGAATG TCAGCGAGCCCGCCGACCCCGTTCGAAATAGCCGGATGATGTTTGAACGGGCGCTTAGGCGCCGCGAGGTAAAGCACCTG ATACTCGACGAGGCGGTGCATTTCACCAACTCTCTGACTGACCCACTGCAGTACGGAAATTTGCTGAAGTCATTGTCGAA TCGGTCTGGGTTCAACCTGCTTCTACTCGGGGCATACGGATGCGAACAGCTCGTGCTCGCGTCGGCGCAGTTAGCGCGGC GCATCGGCGTTGTTCACTATCCCAGATACTTCCAGACTGACCAAGATTTCACCGAATACTGCACCTTCGTGAAGTCACTG CTTGCCCACCTTCCGTATGGGTTCGATATCGACATCGAGAACCGGCTCGAGTACCTCTTCGCCGGCACATTCGGATTGCC TGGAGCCACAGTTGATGTGCTAACGGGCGCTGCAGGCCGATGCTGCGAAAGTAAAAGGAAAGTATGGAGCGATGCGTGCC TCCTGAAGAGCATGCCGTCGAAAGAAGCTCAGCGGAAGATTGCTCGAGACACGATGGTGGGCGAGGCGGAGGTCCAACCG TTCCTCCAGATGGAACGTGAACACGACTACGCCACCGAGCAGGATATTCGGAACGTATTGCTGCTCGAGGAGCAGACGCG ACGCAAAATCAACGGGAGGATGCACGGATGA
Upstream 100 bases:
>100_bases TCGGCGTCGGGCTAACGACGCGCCACGTCCGAACCCACCTCGCACTTTCGGTCGCTTCAAAATCGACTACTCCCATCTAC CTGTAAGGAATCCTATTTAA
Downstream 100 bases:
>100_bases CAGCGTTGACGAGTTCTGCATGCAGACCCGGCGGCTGGCCGGAAGATGCGCCGCCACGGTCGGCATTGTTTTCGCTGAAC CCTGAGGGTCACAGCGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: ATPase
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MDWRLTMITREQAITGSPEDKAAYMKATCVPHRNLDAVMHEVRSRMTAGAGLSITLVVGPPGVGKTTFGRKQLQSLLSRY PIQLQEKRHIIPAVMSEVDAADRGEFNFNLLYNRLCADLMAPSSLDGPVLLENVSEPADPVRNSRMMFERALRRREVKHL ILDEAVHFTNSLTDPLQYGNLLKSLSNRSGFNLLLLGAYGCEQLVLASAQLARRIGVVHYPRYFQTDQDFTEYCTFVKSL LAHLPYGFDIDIENRLEYLFAGTFGLPGATVDVLTGAAGRCCESKRKVWSDACLLKSMPSKEAQRKIARDTMVGEAEVQP FLQMEREHDYATEQDIRNVLLLEEQTRRKINGRMHG
Sequences:
>Translated_356_residues MDWRLTMITREQAITGSPEDKAAYMKATCVPHRNLDAVMHEVRSRMTAGAGLSITLVVGPPGVGKTTFGRKQLQSLLSRY PIQLQEKRHIIPAVMSEVDAADRGEFNFNLLYNRLCADLMAPSSLDGPVLLENVSEPADPVRNSRMMFERALRRREVKHL ILDEAVHFTNSLTDPLQYGNLLKSLSNRSGFNLLLLGAYGCEQLVLASAQLARRIGVVHYPRYFQTDQDFTEYCTFVKSL LAHLPYGFDIDIENRLEYLFAGTFGLPGATVDVLTGAAGRCCESKRKVWSDACLLKSMPSKEAQRKIARDTMVGEAEVQP FLQMEREHDYATEQDIRNVLLLEEQTRRKINGRMHG >Mature_356_residues MDWRLTMITREQAITGSPEDKAAYMKATCVPHRNLDAVMHEVRSRMTAGAGLSITLVVGPPGVGKTTFGRKQLQSLLSRY PIQLQEKRHIIPAVMSEVDAADRGEFNFNLLYNRLCADLMAPSSLDGPVLLENVSEPADPVRNSRMMFERALRRREVKHL ILDEAVHFTNSLTDPLQYGNLLKSLSNRSGFNLLLLGAYGCEQLVLASAQLARRIGVVHYPRYFQTDQDFTEYCTFVKSL LAHLPYGFDIDIENRLEYLFAGTFGLPGATVDVLTGAAGRCCESKRKVWSDACLLKSMPSKEAQRKIARDTMVGEAEVQP FLQMEREHDYATEQDIRNVLLLEEQTRRKINGRMHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40139; Mature: 40139
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDWRLTMITREQAITGSPEDKAAYMKATCVPHRNLDAVMHEVRSRMTAGAGLSITLVVGP CCEEEEEEEHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECC PGVGKTTFGRKQLQSLLSRYPIQLQEKRHIIPAVMSEVDAADRGEFNFNLLYNRLCADLM CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH APSSLDGPVLLENVSEPADPVRNSRMMFERALRRREVKHLILDEAVHFTNSLTDPLQYGN CCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LLKSLSNRSGFNLLLLGAYGCEQLVLASAQLARRIGVVHYPRYFQTDQDFTEYCTFVKSL HHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHH LAHLPYGFDIDIENRLEYLFAGTFGLPGATVDVLTGAAGRCCESKRKVWSDACLLKSMPS HHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC KEAQRKIARDTMVGEAEVQPFLQMEREHDYATEQDIRNVLLLEEQTRRKINGRMHG HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MDWRLTMITREQAITGSPEDKAAYMKATCVPHRNLDAVMHEVRSRMTAGAGLSITLVVGP CCEEEEEEEHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECC PGVGKTTFGRKQLQSLLSRYPIQLQEKRHIIPAVMSEVDAADRGEFNFNLLYNRLCADLM CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH APSSLDGPVLLENVSEPADPVRNSRMMFERALRRREVKHLILDEAVHFTNSLTDPLQYGN CCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LLKSLSNRSGFNLLLLGAYGCEQLVLASAQLARRIGVVHYPRYFQTDQDFTEYCTFVKSL HHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHH LAHLPYGFDIDIENRLEYLFAGTFGLPGATVDVLTGAAGRCCESKRKVWSDACLLKSMPS HHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC KEAQRKIARDTMVGEAEVQPFLQMEREHDYATEQDIRNVLLLEEQTRRKINGRMHG HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA