Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116688235

Identifier: 116688235

GI number: 116688235

Start: 235376

End: 236446

Strand: Reverse

Name: 116688235

Synonym: Bcen2424_0211

Alternate gene names: NA

Gene position: 236446-235376 (Counterclockwise)

Preceding gene: 116688236

Following gene: 116688234

Centisome position: 6.79

GC content: 57.24

Gene sequence:

>1071_bases
TTGGACTGGAGGTTGACCATGATTACGCGCGAACAGGCCATCACCGGCTCGCCCGAGGACAAGGCCGCATACATGAAGGC
AACCTGCGTTCCGCACCGAAATCTCGATGCGGTGATGCATGAAGTGCGCAGCCGCATGACTGCAGGTGCCGGTCTTTCCA
TCACGCTGGTCGTGGGCCCGCCTGGAGTGGGGAAGACGACCTTTGGCCGCAAGCAGTTGCAAAGCCTCTTGTCCAGGTAT
CCGATACAGCTTCAGGAGAAGCGCCACATCATTCCGGCCGTGATGAGCGAGGTCGATGCCGCTGACAGAGGCGAATTCAA
TTTCAACCTTCTCTACAACCGCCTCTGTGCAGACCTGATGGCGCCCAGCTCTTTGGATGGACCCGTGTTGCTCGAGAATG
TCAGCGAGCCCGCCGACCCCGTTCGAAATAGCCGGATGATGTTTGAACGGGCGCTTAGGCGCCGCGAGGTAAAGCACCTG
ATACTCGACGAGGCGGTGCATTTCACCAACTCTCTGACTGACCCACTGCAGTACGGAAATTTGCTGAAGTCATTGTCGAA
TCGGTCTGGGTTCAACCTGCTTCTACTCGGGGCATACGGATGCGAACAGCTCGTGCTCGCGTCGGCGCAGTTAGCGCGGC
GCATCGGCGTTGTTCACTATCCCAGATACTTCCAGACTGACCAAGATTTCACCGAATACTGCACCTTCGTGAAGTCACTG
CTTGCCCACCTTCCGTATGGGTTCGATATCGACATCGAGAACCGGCTCGAGTACCTCTTCGCCGGCACATTCGGATTGCC
TGGAGCCACAGTTGATGTGCTAACGGGCGCTGCAGGCCGATGCTGCGAAAGTAAAAGGAAAGTATGGAGCGATGCGTGCC
TCCTGAAGAGCATGCCGTCGAAAGAAGCTCAGCGGAAGATTGCTCGAGACACGATGGTGGGCGAGGCGGAGGTCCAACCG
TTCCTCCAGATGGAACGTGAACACGACTACGCCACCGAGCAGGATATTCGGAACGTATTGCTGCTCGAGGAGCAGACGCG
ACGCAAAATCAACGGGAGGATGCACGGATGA

Upstream 100 bases:

>100_bases
TCGGCGTCGGGCTAACGACGCGCCACGTCCGAACCCACCTCGCACTTTCGGTCGCTTCAAAATCGACTACTCCCATCTAC
CTGTAAGGAATCCTATTTAA

Downstream 100 bases:

>100_bases
CAGCGTTGACGAGTTCTGCATGCAGACCCGGCGGCTGGCCGGAAGATGCGCCGCCACGGTCGGCATTGTTTTCGCTGAAC
CCTGAGGGTCACAGCGGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: ATPase

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MDWRLTMITREQAITGSPEDKAAYMKATCVPHRNLDAVMHEVRSRMTAGAGLSITLVVGPPGVGKTTFGRKQLQSLLSRY
PIQLQEKRHIIPAVMSEVDAADRGEFNFNLLYNRLCADLMAPSSLDGPVLLENVSEPADPVRNSRMMFERALRRREVKHL
ILDEAVHFTNSLTDPLQYGNLLKSLSNRSGFNLLLLGAYGCEQLVLASAQLARRIGVVHYPRYFQTDQDFTEYCTFVKSL
LAHLPYGFDIDIENRLEYLFAGTFGLPGATVDVLTGAAGRCCESKRKVWSDACLLKSMPSKEAQRKIARDTMVGEAEVQP
FLQMEREHDYATEQDIRNVLLLEEQTRRKINGRMHG

Sequences:

>Translated_356_residues
MDWRLTMITREQAITGSPEDKAAYMKATCVPHRNLDAVMHEVRSRMTAGAGLSITLVVGPPGVGKTTFGRKQLQSLLSRY
PIQLQEKRHIIPAVMSEVDAADRGEFNFNLLYNRLCADLMAPSSLDGPVLLENVSEPADPVRNSRMMFERALRRREVKHL
ILDEAVHFTNSLTDPLQYGNLLKSLSNRSGFNLLLLGAYGCEQLVLASAQLARRIGVVHYPRYFQTDQDFTEYCTFVKSL
LAHLPYGFDIDIENRLEYLFAGTFGLPGATVDVLTGAAGRCCESKRKVWSDACLLKSMPSKEAQRKIARDTMVGEAEVQP
FLQMEREHDYATEQDIRNVLLLEEQTRRKINGRMHG
>Mature_356_residues
MDWRLTMITREQAITGSPEDKAAYMKATCVPHRNLDAVMHEVRSRMTAGAGLSITLVVGPPGVGKTTFGRKQLQSLLSRY
PIQLQEKRHIIPAVMSEVDAADRGEFNFNLLYNRLCADLMAPSSLDGPVLLENVSEPADPVRNSRMMFERALRRREVKHL
ILDEAVHFTNSLTDPLQYGNLLKSLSNRSGFNLLLLGAYGCEQLVLASAQLARRIGVVHYPRYFQTDQDFTEYCTFVKSL
LAHLPYGFDIDIENRLEYLFAGTFGLPGATVDVLTGAAGRCCESKRKVWSDACLLKSMPSKEAQRKIARDTMVGEAEVQP
FLQMEREHDYATEQDIRNVLLLEEQTRRKINGRMHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40139; Mature: 40139

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWRLTMITREQAITGSPEDKAAYMKATCVPHRNLDAVMHEVRSRMTAGAGLSITLVVGP
CCEEEEEEEHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECC
PGVGKTTFGRKQLQSLLSRYPIQLQEKRHIIPAVMSEVDAADRGEFNFNLLYNRLCADLM
CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
APSSLDGPVLLENVSEPADPVRNSRMMFERALRRREVKHLILDEAVHFTNSLTDPLQYGN
CCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LLKSLSNRSGFNLLLLGAYGCEQLVLASAQLARRIGVVHYPRYFQTDQDFTEYCTFVKSL
HHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHH
LAHLPYGFDIDIENRLEYLFAGTFGLPGATVDVLTGAAGRCCESKRKVWSDACLLKSMPS
HHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
KEAQRKIARDTMVGEAEVQPFLQMEREHDYATEQDIRNVLLLEEQTRRKINGRMHG
HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDWRLTMITREQAITGSPEDKAAYMKATCVPHRNLDAVMHEVRSRMTAGAGLSITLVVGP
CCEEEEEEEHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECC
PGVGKTTFGRKQLQSLLSRYPIQLQEKRHIIPAVMSEVDAADRGEFNFNLLYNRLCADLM
CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
APSSLDGPVLLENVSEPADPVRNSRMMFERALRRREVKHLILDEAVHFTNSLTDPLQYGN
CCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LLKSLSNRSGFNLLLLGAYGCEQLVLASAQLARRIGVVHYPRYFQTDQDFTEYCTFVKSL
HHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHH
LAHLPYGFDIDIENRLEYLFAGTFGLPGATVDVLTGAAGRCCESKRKVWSDACLLKSMPS
HHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
KEAQRKIARDTMVGEAEVQPFLQMEREHDYATEQDIRNVLLLEEQTRRKINGRMHG
HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA