Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688221

Identifier: 116688221

GI number: 116688221

Start: 219607

End: 220080

Strand: Reverse

Name: 116688221

Synonym: Bcen2424_0197

Alternate gene names: NA

Gene position: 220080-219607 (Counterclockwise)

Preceding gene: 116688223

Following gene: 116688220

Centisome position: 6.32

GC content: 59.49

Gene sequence:

>474_bases
ATGCAAGAGCAAGCCCAGAACGTCCGGAACGCCGCACAAACGGTGTTCCCGCTCTTTGTCATCGTTGGCATTTTCGGCCT
CGGCATCTGGCCGGTCATGTATCTGTCGATGCGTGAAAAGCGCATCAACGAAGCGCTCGGCGCGGAGCTCATCCCGCACT
GGGTTTCCGTGACTCAGGTCGCACTGCTTGGCACCACGCTCTTTCTGAAGTTCTTCGGCGGCTGGATCGATTCGGACGAC
ATCGTCGGCCTGTCGGTCCTCACCTCGCTCGCCATGGGCGTGATGTGGATCGTCTTCGCGTTTCGGGCAAAGGCAACGCT
CGAGCGCGTGGTCGTGCATCAATGGCAGATCACGGGCTACCGGCTCAATCCAGTGTGGACGTTCTTTTTCTCGCTCTTTT
ACATCGTCTACTGCCTGAACGACCTGCCGGAAGCTGTACGACGCGCCAGCCCCATCCAGCAGCCTGTCGCCTGA

Upstream 100 bases:

>100_bases
ACTCATTGTAATCCCCATTTCCGACCGCTGTAACGAACCGCAGCGGCAGGTCCTTTCTCACCCCTCTTTGTAGAGTAAAC
ACGTCAATAAAGGAGTCGTC

Downstream 100 bases:

>100_bases
GCCCGTTCCGCACCGCCGCTGCGCTTTTCCCGGCAGGCGGTGCGGGATCAACGCTCCCGAAACGACAATCCACCCGGCTC
ACCCGACACCGTCTGCCACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MQEQAQNVRNAAQTVFPLFVIVGIFGLGIWPVMYLSMREKRINEALGAELIPHWVSVTQVALLGTTLFLKFFGGWIDSDD
IVGLSVLTSLAMGVMWIVFAFRAKATLERVVVHQWQITGYRLNPVWTFFFSLFYIVYCLNDLPEAVRRASPIQQPVA

Sequences:

>Translated_157_residues
MQEQAQNVRNAAQTVFPLFVIVGIFGLGIWPVMYLSMREKRINEALGAELIPHWVSVTQVALLGTTLFLKFFGGWIDSDD
IVGLSVLTSLAMGVMWIVFAFRAKATLERVVVHQWQITGYRLNPVWTFFFSLFYIVYCLNDLPEAVRRASPIQQPVA
>Mature_157_residues
MQEQAQNVRNAAQTVFPLFVIVGIFGLGIWPVMYLSMREKRINEALGAELIPHWVSVTQVALLGTTLFLKFFGGWIDSDD
IVGLSVLTSLAMGVMWIVFAFRAKATLERVVVHQWQITGYRLNPVWTFFFSLFYIVYCLNDLPEAVRRASPIQQPVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17825; Mature: 17825

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEQAQNVRNAAQTVFPLFVIVGIFGLGIWPVMYLSMREKRINEALGAELIPHWVSVTQV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLGTTLFLKFFGGWIDSDDIVGLSVLTSLAMGVMWIVFAFRAKATLERVVVHQWQITGY
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
RLNPVWTFFFSLFYIVYCLNDLPEAVRRASPIQQPVA
ECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MQEQAQNVRNAAQTVFPLFVIVGIFGLGIWPVMYLSMREKRINEALGAELIPHWVSVTQV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLGTTLFLKFFGGWIDSDDIVGLSVLTSLAMGVMWIVFAFRAKATLERVVVHQWQITGY
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
RLNPVWTFFFSLFYIVYCLNDLPEAVRRASPIQQPVA
ECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA