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The map label for this gene is 116688193

Identifier: 116688193

GI number: 116688193

Start: 189884

End: 190468

Strand: Reverse

Name: 116688193

Synonym: Bcen2424_0169

Alternate gene names: NA

Gene position: 190468-189884 (Counterclockwise)

Preceding gene: 116688194

Following gene: 116688191

Centisome position: 5.47

GC content: 66.5

Gene sequence:

>585_bases
TTGCAAACGTGGACGGGAAAAAGGTATCGTCCTGGCGCTTGGGGATTGCGAGTTTTTGCTCAACGGCAACGGCGTGCCCA
GTGCTGTGAACCTCCGCAAGCCTCCATCCCGATTAGGCATCGTTCGCGAATAGCAAAGTGCTCCAGGAACTCGGCGCGGC
GAAGCTGTCTGTCGAACGCTTCGCCGGTGTCTGCAACTATCGCGCTGCAGGTCGCGCAGGCGATCCCCGGGGCAACGCGA
GAACCGGCGCATCTCCCGCTCCCCGCGCGCACGAATCAGGGACAACCGGTTCGGGCAACTGCACGGGCTCGCCGAGTTCG
ACGACCGGTTCGCAGATCGCCGCGACCTACACGCGGAGCTCGCCGCGCTCGCGCCGACGCGAACGATCCGCGACTCGCCG
ACTATCAGCCGTACTGGGCCGCGCGCGCCGACCTGCCCTGCTCGCGCGCGGGCGCGACGGCCGATTCGCTACGCATGTAC
GACCTCGCGATCGGCATCGAACGCGACCCGGCCGCGCGACGCTTTTTGCAGCATCGGCGCATCGCGTTGACGCCGACCCA
TCAGCCGCCCACGACGATCGTGTAA

Upstream 100 bases:

>100_bases
TCGGTCTGCCCGGTCGCGACAACGGGTGACTGCAGCCCGAGGTCAGAAAAAATTGATGAATATTCCAGATACAGCTATGC
AAGTGCCTTGACTATCAACC

Downstream 100 bases:

>100_bases
CTACCCGGCGCGAGCTTGTCGAGATACTGATAAGCGACGCCGTCGCTGGCCGCGCCGAGCGGATCCAGCGCGGACGAAGA
CGCGCTCGACGCGACCGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MQTWTGKRYRPGAWGLRVFAQRQRRAQCCEPPQASIPIRHRSRIAKCSRNSARRSCLSNASPVSATIALQVAQAIPGATR
EPAHLPLPARTNQGQPVRATARARRVRRPVRRSPRPTRGARRARADANDPRLADYQPYWAARADLPCSRAGATADSLRMY
DLAIGIERDPAARRFLQHRRIALTPTHQPPTTIV

Sequences:

>Translated_194_residues
MQTWTGKRYRPGAWGLRVFAQRQRRAQCCEPPQASIPIRHRSRIAKCSRNSARRSCLSNASPVSATIALQVAQAIPGATR
EPAHLPLPARTNQGQPVRATARARRVRRPVRRSPRPTRGARRARADANDPRLADYQPYWAARADLPCSRAGATADSLRMY
DLAIGIERDPAARRFLQHRRIALTPTHQPPTTIV
>Mature_194_residues
MQTWTGKRYRPGAWGLRVFAQRQRRAQCCEPPQASIPIRHRSRIAKCSRNSARRSCLSNASPVSATIALQVAQAIPGATR
EPAHLPLPARTNQGQPVRATARARRVRRPVRRSPRPTRGARRARADANDPRLADYQPYWAARADLPCSRAGATADSLRMY
DLAIGIERDPAARRFLQHRRIALTPTHQPPTTIV

Specific function: Unknown

COG id: COG4941

COG function: function code K; Predicted RNA polymerase sigma factor containing a TPR repeat domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21718; Mature: 21718

Theoretical pI: Translated: 12.41; Mature: 12.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTWTGKRYRPGAWGLRVFAQRQRRAQCCEPPQASIPIRHRSRIAKCSRNSARRSCLSNA
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
SPVSATIALQVAQAIPGATREPAHLPLPARTNQGQPVRATARARRVRRPVRRSPRPTRGA
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHH
RRARADANDPRLADYQPYWAARADLPCSRAGATADSLRMYDLAIGIERDPAARRFLQHRR
HHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHEEEEHHEECCCCCHHHHHHHHHCC
IALTPTHQPPTTIV
EEECCCCCCCCCCC
>Mature Secondary Structure
MQTWTGKRYRPGAWGLRVFAQRQRRAQCCEPPQASIPIRHRSRIAKCSRNSARRSCLSNA
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
SPVSATIALQVAQAIPGATREPAHLPLPARTNQGQPVRATARARRVRRPVRRSPRPTRGA
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHH
RRARADANDPRLADYQPYWAARADLPCSRAGATADSLRMYDLAIGIERDPAARRFLQHRR
HHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHEEEEHHEECCCCCHHHHHHHHHCC
IALTPTHQPPTTIV
EEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA