Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688092

Identifier: 116688092

GI number: 116688092

Start: 69833

End: 71047

Strand: Direct

Name: 116688092

Synonym: Bcen2424_0068

Alternate gene names: NA

Gene position: 69833-71047 (Clockwise)

Preceding gene: 116688091

Following gene: 116688093

Centisome position: 2.0

GC content: 65.68

Gene sequence:

>1215_bases
ATGAAGTCGGCGTTCTCATTCCTGCCCAACTGGCCGCTCGCGCCGGATGCCGTGTTCTGGGCCGGGCTCGCACTGTTTGC
AGCCGGCCTGTGCGGCGAGCTGTGCTATCGCGCGTGGCGCTTGCCGCGCATCACCGGCTATGCCGTGATCGGCCTGATCG
CCGGTTCGTTCGGATTCGGCGTGATCGACACGAGCACCGACGAAACCTCGCGACTGTTGATGGACGTCGCGCTCGGTCTG
CTGCTGTTCGAGCTCGGCAGCCGCCTCGACCTGCGCTGGATTCGGCGCAATCCGTGGCTCGTCGCGTCGAGCCTCGCGGA
AGCCACGCTAACCTTCGTGCTCGTGCTGTTCGTGATGCTCGCGCTCGGCGTATCGGGGATGGTCGCCCTCGTGCTGTCGG
CGATCGCGATCGCGACGTCGCCGTCGATGGTGATCCAGCTCAAGACCGAACTGCGTGCGGAAGGGCAGGTGTCGCAGCGC
CTGATCACGCTCACCGCGCTCAACAGCGTGTATGCGATCGTGCTGACCAAGCTCGTGACGAGCTGGCTGCACCAGGAAGC
GTACGGCAACGTTTTCGCGACGATCCTGCAGCCGCTCTACCTGCTCGCCGGTTCGTTCATCGTCGCGTATCTGGTCGCGC
GTTCGTGCAATTACCTGTTCCGTCACATGACCGCGACGATGCGCGACGAGCATTCATTCGTCGCGCTGTTCGGGCTCGTG
ATGCTCGCGATCGCCGTCGCGCAGGCGCTGAAGCTGTCGACGCTGCTCACGCTGCTGCTCGCCGGCATCATCGTGAAGAA
CCTCGAAGCGCGGCCGCAGCTGTGGCCCGAGCACTTCGGCACGGCCGGCTGGCTGCTGACGGTGGTGCTGTTCGTGCTGA
CGCTCACGTCGTTCACGTGGGGCGACATCGCGCTCGGCGGGCTGCTCGCGATCGTGCTGATCGTCACGCGGCTCGTCGCG
AAGCTGGCCGGCGTCGTCGCGTTCGCGAAGCCGAGCGGCCTCGGGATGAAGCAGGGCGTCGCGCTCGGCATCGCGCTCAC
GCCGATGTCCGCGCTGTCGTACCTGCTCGTCGACGATACCTACCAGCTCTATCCCAATTTCGACCCGCACCTGCGCGCGA
TCGTGATGTGCTCGATCGTGATCCTGCAGCTCGTCAGCCCGTTCGTCGTCTATCGCTGCCTGTCGGCGGTCGGCGAACGC
AGCGACAGCAACTGA

Upstream 100 bases:

>100_bases
ACAACAATCACATTCGGGGCGATACCCAGCCGGCGCGCATCCATTCCTGTCGCTTGACCCCGCGTCGCTGGCGGTTGCTT
CCAAAGGAGAAGTCACCACG

Downstream 100 bases:

>100_bases
TTCCGGAACCTGCCATGGCACTCGAAACCTTCGTCAATTCCGAACCGTTCACGTTCGGCGTCGAACTGGAGATCCAGGTC
GTCAACACGCACAACTACGA

Product: sodium/hydrogen exchanger

Products: NA

Alternate protein names: Na/H+ Antiporter; Transmembrane Protein; Sodium/Hydrogen Exchanger Family Protein; Na/H Antiporter; Na+/H+ Antiporters

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MKSAFSFLPNWPLAPDAVFWAGLALFAAGLCGELCYRAWRLPRITGYAVIGLIAGSFGFGVIDTSTDETSRLLMDVALGL
LLFELGSRLDLRWIRRNPWLVASSLAEATLTFVLVLFVMLALGVSGMVALVLSAIAIATSPSMVIQLKTELRAEGQVSQR
LITLTALNSVYAIVLTKLVTSWLHQEAYGNVFATILQPLYLLAGSFIVAYLVARSCNYLFRHMTATMRDEHSFVALFGLV
MLAIAVAQALKLSTLLTLLLAGIIVKNLEARPQLWPEHFGTAGWLLTVVLFVLTLTSFTWGDIALGGLLAIVLIVTRLVA
KLAGVVAFAKPSGLGMKQGVALGIALTPMSALSYLLVDDTYQLYPNFDPHLRAIVMCSIVILQLVSPFVVYRCLSAVGER
SDSN

Sequences:

>Translated_404_residues
MKSAFSFLPNWPLAPDAVFWAGLALFAAGLCGELCYRAWRLPRITGYAVIGLIAGSFGFGVIDTSTDETSRLLMDVALGL
LLFELGSRLDLRWIRRNPWLVASSLAEATLTFVLVLFVMLALGVSGMVALVLSAIAIATSPSMVIQLKTELRAEGQVSQR
LITLTALNSVYAIVLTKLVTSWLHQEAYGNVFATILQPLYLLAGSFIVAYLVARSCNYLFRHMTATMRDEHSFVALFGLV
MLAIAVAQALKLSTLLTLLLAGIIVKNLEARPQLWPEHFGTAGWLLTVVLFVLTLTSFTWGDIALGGLLAIVLIVTRLVA
KLAGVVAFAKPSGLGMKQGVALGIALTPMSALSYLLVDDTYQLYPNFDPHLRAIVMCSIVILQLVSPFVVYRCLSAVGER
SDSN
>Mature_404_residues
MKSAFSFLPNWPLAPDAVFWAGLALFAAGLCGELCYRAWRLPRITGYAVIGLIAGSFGFGVIDTSTDETSRLLMDVALGL
LLFELGSRLDLRWIRRNPWLVASSLAEATLTFVLVLFVMLALGVSGMVALVLSAIAIATSPSMVIQLKTELRAEGQVSQR
LITLTALNSVYAIVLTKLVTSWLHQEAYGNVFATILQPLYLLAGSFIVAYLVARSCNYLFRHMTATMRDEHSFVALFGLV
MLAIAVAQALKLSTLLTLLLAGIIVKNLEARPQLWPEHFGTAGWLLTVVLFVLTLTSFTWGDIALGGLLAIVLIVTRLVA
KLAGVVAFAKPSGLGMKQGVALGIALTPMSALSYLLVDDTYQLYPNFDPHLRAIVMCSIVILQLVSPFVVYRCLSAVGER
SDSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43788; Mature: 43788

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure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HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA