Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688046

Identifier: 116688046

GI number: 116688046

Start: 24242

End: 25468

Strand: Direct

Name: 116688046

Synonym: Bcen2424_0022

Alternate gene names: NA

Gene position: 24242-25468 (Clockwise)

Preceding gene: 116688045

Following gene: 116688047

Centisome position: 0.7

GC content: 69.27

Gene sequence:

>1227_bases
ATGAGCCTCCTTGCATCCCAGCTTCAGCGCCGTTACCAGGACGTGCGCGCCCATAGCATCGCGTTGACCGCGACGCTGTC
CGCCGAAGACCAGGCCGTGCAGTCGATGCCCGACGCGAGTCCGACCAAATGGCATCTCGCGCATACGACCTGGTTCTTCG
AAACCGTCGTGCTGATGCGCCGCGTGCCGGGCTACGCGCCGTTCGACGCCGCGTTCCAGTTCCTCTTTAATTCCTATTAC
GAAGCGCTCGGCCCGCGCCATCCGCGGCCGCAGCGCGGGCTGCTCACGCGTCCGTCGCTCGACGAGGTGCATGCGTACCG
GCAGTACGTCGACGACGCGATGCTGCGCGCGCTGGCCGGCGCCGACGCGGCACTGCTCGACGCGATCGCGCCCGAGCTCG
TGCTCGGCCTGCATCACGAGCAGCAGCACCAGGAGCTGATCGTCACCGACATGCTGCATGCGTTCTCGTGCAACCCGCTG
CGGCCGGCATTCCGGCCGCGCACCGGCGACGAAGCCGGATGCGCGCTCGCCGCGGGCGACGCCGGCCCGTTGCGCTGGCT
GCCGCAGCCGGGCGGGCTCGTCGAGATCGGCCACGATGGCGATGCGTTTTCGTTCGACAACGAACGGCCCCGTCACACCG
CGCTCGTGCGGCCGTACGAGATCGCGAACCGCCTGGTGACGAACGCGGAATTCGCGGCGTTCATCGCCGACGGCGGCTAT
ACGCGGCCCGAGTTCTGGCTGTCCGACGGCTGGGCCACGGTGCAGCGGGAAGGGTGGCAAGGGCCCGCGTACTGGATGCC
GGACGACGACGATGCGGCCGCCACGCGCGTGCGACGCACGTTCGGCCTGCATGGCGTCGAGCCGCTCGCGCCCGACGCGC
CGGTGTGCCACGTGAGCTTCTACGAAGCGGCCGCGTACGCGGAATGGGCCGGCGCGCGGCTGCCGACCGAATTCGAATGG
GAAACCGCGTTCGCGGCCGACGGCATCCGCCAGATGCTGGGGCACGTGTGGCAGTGGACGCGTTCGTCCTACGAGCCGTA
TCCGGGCTTTCGGCCACTCGCCGGGGTAGCGGCCGAATACAACGGCAAGTTCATGGTCGGCCAGCAGGTCCTGCGCGGCA
GCAGCATCGCGACGCCGCCCGGACACGAACGGCCGACGTACCGCAATTTCTTTCCGCCGGCGGCACGCTGGCAATTCACG
GGAGTGCGACTTGCGCGAGACGTCTGA

Upstream 100 bases:

>100_bases
ACGCAGCAGCAAATCGCACGTCAGCCGCGCGCACTCGAGCGCAAGGCTTTCCCTTTTCCGGCAACGCAACGCAGCGAATC
GCGACGTGAACGGTAAACCG

Downstream 100 bases:

>100_bases
CCTGACGGCCACGAGCGGTGGCCTGCAACCCGCCCGCGATTCGCGGCCGAGCGCGTTCGAGCGCGACCTGATCGACGGAC
TGTCGCGCACGCCGCGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MSLLASQLQRRYQDVRAHSIALTATLSAEDQAVQSMPDASPTKWHLAHTTWFFETVVLMRRVPGYAPFDAAFQFLFNSYY
EALGPRHPRPQRGLLTRPSLDEVHAYRQYVDDAMLRALAGADAALLDAIAPELVLGLHHEQQHQELIVTDMLHAFSCNPL
RPAFRPRTGDEAGCALAAGDAGPLRWLPQPGGLVEIGHDGDAFSFDNERPRHTALVRPYEIANRLVTNAEFAAFIADGGY
TRPEFWLSDGWATVQREGWQGPAYWMPDDDDAAATRVRRTFGLHGVEPLAPDAPVCHVSFYEAAAYAEWAGARLPTEFEW
ETAFAADGIRQMLGHVWQWTRSSYEPYPGFRPLAGVAAEYNGKFMVGQQVLRGSSIATPPGHERPTYRNFFPPAARWQFT
GVRLARDV

Sequences:

>Translated_408_residues
MSLLASQLQRRYQDVRAHSIALTATLSAEDQAVQSMPDASPTKWHLAHTTWFFETVVLMRRVPGYAPFDAAFQFLFNSYY
EALGPRHPRPQRGLLTRPSLDEVHAYRQYVDDAMLRALAGADAALLDAIAPELVLGLHHEQQHQELIVTDMLHAFSCNPL
RPAFRPRTGDEAGCALAAGDAGPLRWLPQPGGLVEIGHDGDAFSFDNERPRHTALVRPYEIANRLVTNAEFAAFIADGGY
TRPEFWLSDGWATVQREGWQGPAYWMPDDDDAAATRVRRTFGLHGVEPLAPDAPVCHVSFYEAAAYAEWAGARLPTEFEW
ETAFAADGIRQMLGHVWQWTRSSYEPYPGFRPLAGVAAEYNGKFMVGQQVLRGSSIATPPGHERPTYRNFFPPAARWQFT
GVRLARDV
>Mature_407_residues
SLLASQLQRRYQDVRAHSIALTATLSAEDQAVQSMPDASPTKWHLAHTTWFFETVVLMRRVPGYAPFDAAFQFLFNSYYE
ALGPRHPRPQRGLLTRPSLDEVHAYRQYVDDAMLRALAGADAALLDAIAPELVLGLHHEQQHQELIVTDMLHAFSCNPLR
PAFRPRTGDEAGCALAAGDAGPLRWLPQPGGLVEIGHDGDAFSFDNERPRHTALVRPYEIANRLVTNAEFAAFIADGGYT
RPEFWLSDGWATVQREGWQGPAYWMPDDDDAAATRVRRTFGLHGVEPLAPDAPVCHVSFYEAAAYAEWAGARLPTEFEWE
TAFAADGIRQMLGHVWQWTRSSYEPYPGFRPLAGVAAEYNGKFMVGQQVLRGSSIATPPGHERPTYRNFFPPAARWQFTG
VRLARDV

Specific function: Unknown

COG id: COG1262

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45604; Mature: 45472

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLASQLQRRYQDVRAHSIALTATLSAEDQAVQSMPDASPTKWHLAHTTWFFETVVLMR
CCHHHHHHHHHHHHHHHHEEEEEEEECCHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHH
RVPGYAPFDAAFQFLFNSYYEALGPRHPRPQRGLLTRPSLDEVHAYRQYVDDAMLRALAG
HCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
ADAALLDAIAPELVLGLHHEQQHQELIVTDMLHAFSCNPLRPAFRPRTGDEAGCALAAGD
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCC
AGPLRWLPQPGGLVEIGHDGDAFSFDNERPRHTALVRPYEIANRLVTNAEFAAFIADGGY
CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHEEECHHHHHHHHHCCCCEEEEEECCCC
TRPEFWLSDGWATVQREGWQGPAYWMPDDDDAAATRVRRTFGLHGVEPLAPDAPVCHVSF
CCCCEEECCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEH
YEAAAYAEWAGARLPTEFEWETAFAADGIRQMLGHVWQWTRSSYEPYPGFRPLAGVAAEY
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHC
NGKFMVGQQVLRGSSIATPPGHERPTYRNFFPPAARWQFTGVRLARDV
CCEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEHCCCC
>Mature Secondary Structure 
SLLASQLQRRYQDVRAHSIALTATLSAEDQAVQSMPDASPTKWHLAHTTWFFETVVLMR
CHHHHHHHHHHHHHHHHEEEEEEEECCHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHH
RVPGYAPFDAAFQFLFNSYYEALGPRHPRPQRGLLTRPSLDEVHAYRQYVDDAMLRALAG
HCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
ADAALLDAIAPELVLGLHHEQQHQELIVTDMLHAFSCNPLRPAFRPRTGDEAGCALAAGD
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCC
AGPLRWLPQPGGLVEIGHDGDAFSFDNERPRHTALVRPYEIANRLVTNAEFAAFIADGGY
CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHEEECHHHHHHHHHCCCCEEEEEECCCC
TRPEFWLSDGWATVQREGWQGPAYWMPDDDDAAATRVRRTFGLHGVEPLAPDAPVCHVSF
CCCCEEECCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEH
YEAAAYAEWAGARLPTEFEWETAFAADGIRQMLGHVWQWTRSSYEPYPGFRPLAGVAAEY
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHC
NGKFMVGQQVLRGSSIATPPGHERPTYRNFFPPAARWQFTGVRLARDV
CCEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA