| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688037
Identifier: 116688037
GI number: 116688037
Start: 19024
End: 19350
Strand: Direct
Name: 116688037
Synonym: Bcen2424_0013
Alternate gene names: NA
Gene position: 19024-19350 (Clockwise)
Preceding gene: 116688036
Following gene: 116688042
Centisome position: 0.55
GC content: 60.55
Gene sequence:
>327_bases TTGACCGATCGTCTTCGCCGGGTTCGACTACGCTCACCCGTTGAATGCACCGGATTTCGAGTGGCTTCGAGTCAACGATA TCCACAAGGCATTCGACGTCCGGACGTCGCCACCGATTCGTTCGCTGCCCTCTTTCATGGTCGGCAAAGCCTTGCCGGGC AACGCATTCAGGCCGACGAGCCCATCGAAACCGGGACGCTCACCGCTCGCATGCACAGGGTTTCAACTGGATCGTGCGCC GGTTATCCACACACCGCCGCTTACGCTTCGGGTCACTTCGTCCCGACTCTCCCGAGAATCTCGCCGGTTTCCGGCGCGAT GACGTAG
Upstream 100 bases:
>100_bases TCTCCTGATGGTGCTGCATGTGACTTCGATGGGTTCGCTCACCTTTGGCATGCACAGTGTTTCTCGTTGTTTTGGGCATC GATATCCACAACCCGGGTGA
Downstream 100 bases:
>100_bases TGGATCGACTTCCCGAGTCGGTTCGCGTTGCCCAGTCCGCGCATGCCCGGAATCAGCTTTGCCACGAACGTGATGGTGAC GACATCATCATCCGGCATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MTDRLRRVRLRSPVECTGFRVASSQRYPQGIRRPDVATDSFAALFHGRQSLAGQRIQADEPIETGTLTARMHRVSTGSCA GYPHTAAYASGHFVPTLPRISPVSGAMT
Sequences:
>Translated_108_residues MTDRLRRVRLRSPVECTGFRVASSQRYPQGIRRPDVATDSFAALFHGRQSLAGQRIQADEPIETGTLTARMHRVSTGSCA GYPHTAAYASGHFVPTLPRISPVSGAMT >Mature_107_residues TDRLRRVRLRSPVECTGFRVASSQRYPQGIRRPDVATDSFAALFHGRQSLAGQRIQADEPIETGTLTARMHRVSTGSCAG YPHTAAYASGHFVPTLPRISPVSGAMT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11771; Mature: 11639
Theoretical pI: Translated: 11.45; Mature: 11.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRLRRVRLRSPVECTGFRVASSQRYPQGIRRPDVATDSFAALFHGRQSLAGQRIQADE CCCCHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHCHHHHCCCCCCCCC PIETGTLTARMHRVSTGSCAGYPHTAAYASGHFVPTLPRISPVSGAMT CCCCCCCEEHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TDRLRRVRLRSPVECTGFRVASSQRYPQGIRRPDVATDSFAALFHGRQSLAGQRIQADE CCCHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHCHHHHCCCCCCCCC PIETGTLTARMHRVSTGSCAGYPHTAAYASGHFVPTLPRISPVSGAMT CCCCCCCEEHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA