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The map label for this gene is nmoT [H]

Identifier: 116688028

GI number: 116688028

Start: 6509

End: 8014

Strand: Direct

Name: nmoT [H]

Synonym: Bcen2424_0004

Alternate gene names: 116688028

Gene position: 6509-8014 (Clockwise)

Preceding gene: 116688027

Following gene: 116688029

Centisome position: 0.19

GC content: 64.74

Gene sequence:

>1506_bases
GTGGGCATATTGGCCAAGATCAGGCGGATGTATTTCCGCGAGAAGGTCCCGCTGCGCGAGATTGCGCGGCGTACGGGCCT
GTCCCGAAACACAGTGCGCCGCTGGCTGCGGCAGACTGATGCCGTCGAGCCGAAGTATCCGAAGCGCGTCAGCCCGAGCG
TCATCGACGACTGGGCCGCACAGCTGACAGGTTGGCTGCGTGCCGACAGTCATCGCCCGAAGCGTGACCGGCGCACCGCC
CGGTTCATGTTCGAGGCGATCCGCGCCGAGGGTTACGCCGGCAGCTACGGCCGCGTGAGCGCGTTCGTGAGGCGTTGGCA
CGAGGAGCAGGCTGAGGCGCCTCGCAGGAAGGCCTTCGTGCCGCTCGCCTTCGAACCCGGCGAAGCCTTCCAGTTTGACT
GGAGCTGCGAATACGCGTTTGTTGGCGGGCTACGGCGACGCCTGGAGGTCGCCCACGTCAAACTTAACTCCAGCCGCGCG
TTCTGGCTCGTCGCCTATCCCACCCAGAGTCACGAGATGCTGTTCGACGCACACGCCCGCGCATTCGCCGCGTTCGGCGG
CGTGCCCCGGCGCGGCATCTACGACAACATGAAGACCGCTGTGGACAAGGTTGGCCGCGGCAAGGAGCGTGCGGTCAACG
CGCGCTTCGAAGCAATGTGCAGTCACTACCTGTTCGAGCCAGAGTTCTGCAATCGGGCGGCAGGTTGGGAGAAAGGCATC
GTCGAGAAGAACGTTCAGGACCGGCGGCGTCAGATCTGGCACGAAGCATCGCTACGGCGCTGGGAAACGCTGGAGATCCT
AAACGAATGGGTCGCTGGTCAGTGTCGTGAGGCGTGGCACATGCGGCACCCGCAGTGGCCTGAGCTGACAGTCGAGGATG
TGCTGCAGGACGAGCGTACCCGGCTGATGCCCAATCCACGGCCGTTCGACGGCTATGTCGAGCAGACCCTGCGAGTCTCG
TCGACCAGCCTGATTCACTTCCAACGCAACCGCTACAGCGTGCCCACCGAGTACACGAACCAGTTGGTGAGCGTGCGCTG
CTATCCGGCATATCTCAGCGTCGTCGTCAACGCCCAGGAGATCGCACGCCACGAACGCAGCTTCGAGCGGCACATGACCT
TCTACGATTGGCGCCACTACATCACGCTGGTCGAGCGCAAACCCGGCGCACTGCGCAACGGCGCACCGTTCATCACGATG
CCGCAGCCGCTGCAACTGCTGCAGCGGCATCTGCTGAAACACCCGGGCGGCGATCGCGTCATGACGCAGGTGCTCGCTGC
GGTGCGCGAACACGGGCTCGATGCGGTGCTGCTCGCCGTACAGGCTGCGCTGGATTCAGGACGCCCCAGCGCAGAGCACG
TCCTGAACGTGCTGAGCCGGCTGAAGGCGCCCGTCACGAATGGCAGGCTCGCCACGACGAAACTCCAGCTCAAGGAAGAG
CCCGCGGCCGACGTGGGCCGTTACGAGACGCTGCGCGCCAACCCACCGGAGGATCGTCATGTCTAA

Upstream 100 bases:

>100_bases
CAGAACTGACCCACTAGAGCTGCAAATTTTCATCGAATTTTGACCCACGTGATTGAATGCCCTGCTCAATCTTTGAGCAG
GGGATACAAAGGTGATCACG

Downstream 100 bases:

>100_bases
CGATATCGCGGCCCAGCTCAAGGGTCTTAAACTGCACGGCATGGCGAGCACATGGCCGGAGCTGCTCGCGCAGTCGCGTC
ACACTGACTTCGAGCCGGAG

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 500

Protein sequence:

>501_residues
MGILAKIRRMYFREKVPLREIARRTGLSRNTVRRWLRQTDAVEPKYPKRVSPSVIDDWAAQLTGWLRADSHRPKRDRRTA
RFMFEAIRAEGYAGSYGRVSAFVRRWHEEQAEAPRRKAFVPLAFEPGEAFQFDWSCEYAFVGGLRRRLEVAHVKLNSSRA
FWLVAYPTQSHEMLFDAHARAFAAFGGVPRRGIYDNMKTAVDKVGRGKERAVNARFEAMCSHYLFEPEFCNRAAGWEKGI
VEKNVQDRRRQIWHEASLRRWETLEILNEWVAGQCREAWHMRHPQWPELTVEDVLQDERTRLMPNPRPFDGYVEQTLRVS
STSLIHFQRNRYSVPTEYTNQLVSVRCYPAYLSVVVNAQEIARHERSFERHMTFYDWRHYITLVERKPGALRNGAPFITM
PQPLQLLQRHLLKHPGGDRVMTQVLAAVREHGLDAVLLAVQAALDSGRPSAEHVLNVLSRLKAPVTNGRLATTKLQLKEE
PAADVGRYETLRANPPEDRHV

Sequences:

>Translated_501_residues
MGILAKIRRMYFREKVPLREIARRTGLSRNTVRRWLRQTDAVEPKYPKRVSPSVIDDWAAQLTGWLRADSHRPKRDRRTA
RFMFEAIRAEGYAGSYGRVSAFVRRWHEEQAEAPRRKAFVPLAFEPGEAFQFDWSCEYAFVGGLRRRLEVAHVKLNSSRA
FWLVAYPTQSHEMLFDAHARAFAAFGGVPRRGIYDNMKTAVDKVGRGKERAVNARFEAMCSHYLFEPEFCNRAAGWEKGI
VEKNVQDRRRQIWHEASLRRWETLEILNEWVAGQCREAWHMRHPQWPELTVEDVLQDERTRLMPNPRPFDGYVEQTLRVS
STSLIHFQRNRYSVPTEYTNQLVSVRCYPAYLSVVVNAQEIARHERSFERHMTFYDWRHYITLVERKPGALRNGAPFITM
PQPLQLLQRHLLKHPGGDRVMTQVLAAVREHGLDAVLLAVQAALDSGRPSAEHVLNVLSRLKAPVTNGRLATTKLQLKEE
PAADVGRYETLRANPPEDRHV
>Mature_500_residues
GILAKIRRMYFREKVPLREIARRTGLSRNTVRRWLRQTDAVEPKYPKRVSPSVIDDWAAQLTGWLRADSHRPKRDRRTAR
FMFEAIRAEGYAGSYGRVSAFVRRWHEEQAEAPRRKAFVPLAFEPGEAFQFDWSCEYAFVGGLRRRLEVAHVKLNSSRAF
WLVAYPTQSHEMLFDAHARAFAAFGGVPRRGIYDNMKTAVDKVGRGKERAVNARFEAMCSHYLFEPEFCNRAAGWEKGIV
EKNVQDRRRQIWHEASLRRWETLEILNEWVAGQCREAWHMRHPQWPELTVEDVLQDERTRLMPNPRPFDGYVEQTLRVSS
TSLIHFQRNRYSVPTEYTNQLVSVRCYPAYLSVVVNAQEIARHERSFERHMTFYDWRHYITLVERKPGALRNGAPFITMP
QPLQLLQRHLLKHPGGDRVMTQVLAAVREHGLDAVLLAVQAALDSGRPSAEHVLNVLSRLKAPVTNGRLATTKLQLKEEP
AADVGRYETLRANPPEDRHV

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG4584

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017894
- InterPro:   IPR001584 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 58240; Mature: 58109

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGILAKIRRMYFREKVPLREIARRTGLSRNTVRRWLRQTDAVEPKYPKRVSPSVIDDWAA
CCHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
QLTGWLRADSHRPKRDRRTARFMFEAIRAEGYAGSYGRVSAFVRRWHEEQAEAPRRKAFV
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHCEE
PLAFEPGEAFQFDWSCEYAFVGGLRRRLEVAHVKLNSSRAFWLVAYPTQSHEMLFDAHAR
EEEECCCCCEEECCCCCHHHHHHHHHHHHHHEEEECCCCEEEEEEECCCCCHHHHHHHHH
AFAAFGGVPRRGIYDNMKTAVDKVGRGKERAVNARFEAMCSHYLFEPEFCNRAAGWEKGI
HHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCH
VEKNVQDRRRQIWHEASLRRWETLEILNEWVAGQCREAWHMRHPQWPELTVEDVLQDERT
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
RLMPNPRPFDGYVEQTLRVSSTSLIHFQRNRYSVPTEYTNQLVSVRCYPAYLSVVVNAQE
HCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHCCHHEEEEHHHHHHHHHCHHH
IARHERSFERHMTFYDWRHYITLVERKPGALRNGAPFITMPQPLQLLQRHLLKHPGGDRV
HHHHHHHHHHHCHHHHHHHHHEEEECCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCHHH
MTQVLAAVREHGLDAVLLAVQAALDSGRPSAEHVLNVLSRLKAPVTNGRLATTKLQLKEE
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCC
PAADVGRYETLRANPPEDRHV
CCHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GILAKIRRMYFREKVPLREIARRTGLSRNTVRRWLRQTDAVEPKYPKRVSPSVIDDWAA
CHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
QLTGWLRADSHRPKRDRRTARFMFEAIRAEGYAGSYGRVSAFVRRWHEEQAEAPRRKAFV
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHCEE
PLAFEPGEAFQFDWSCEYAFVGGLRRRLEVAHVKLNSSRAFWLVAYPTQSHEMLFDAHAR
EEEECCCCCEEECCCCCHHHHHHHHHHHHHHEEEECCCCEEEEEEECCCCCHHHHHHHHH
AFAAFGGVPRRGIYDNMKTAVDKVGRGKERAVNARFEAMCSHYLFEPEFCNRAAGWEKGI
HHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCH
VEKNVQDRRRQIWHEASLRRWETLEILNEWVAGQCREAWHMRHPQWPELTVEDVLQDERT
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
RLMPNPRPFDGYVEQTLRVSSTSLIHFQRNRYSVPTEYTNQLVSVRCYPAYLSVVVNAQE
HCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHCCHHEEEEHHHHHHHHHCHHH
IARHERSFERHMTFYDWRHYITLVERKPGALRNGAPFITMPQPLQLLQRHLLKHPGGDRV
HHHHHHHHHHHCHHHHHHHHHEEEECCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCHHH
MTQVLAAVREHGLDAVLLAVQAALDSGRPSAEHVLNVLSRLKAPVTNGRLATTKLQLKEE
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCC
PAADVGRYETLRANPPEDRHV
CCHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023192 [H]