| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is thiG
Identifier: 116626758
GI number: 116626758
Start: 9706058
End: 9706837
Strand: Direct
Name: thiG
Synonym: Acid_7731
Alternate gene names: 116626758
Gene position: 9706058-9706837 (Clockwise)
Preceding gene: 116626757
Following gene: 116626762
Centisome position: 97.4
GC content: 61.79
Gene sequence:
>780_bases ATGTCGGACAAATTGACCATCGCGGGACGCGAGTTTGCTTCGCGCCTGATTGTGGGCACGGGAAAATATCGCAGTTTTCA GGAAATGCAGCGCTGCCACGAGGCGAGCGGCGCCGATATGGTGACGGTGGCGGTGCGGCGCGTAAACCTGACTGACCGTA CCAAGGAATCGCTGATCGATTATATCGACCGCAGTAAGATTTTCATTCTGCCGAATACCGCGGGCTGTTATACCGCCGAT GATGCTGTGCGCACTGCCATGCTGGGGCGCGAGGTCGGGCTCTCCAACTGGGTGAAGCTGGAAGTGATCGGTGACGAGAA GACTCTGTTCCCGGATAATGCCGGGCTTCTGGAAGCGACGCGGATTCTAGTGAAGGAAGGCTTTGCGGTGCTGCCGTATA CGAACGACGATATCGTAAACGCGCGGCGGCTGATCGAGGCGGGGGCGGCGGCGGTGATGCCGCTGGCAGCGCCGATCGGG TCGGGGCTGGGAATTCAGAATCCGACGAATTTGCGGATCTTCCGGGAGATGATCACGGAGGTTCCGGTGATTGTGGACGC GGGTGTGGGCACGGCGAGCGATGCGGCGATCGCGATGGAGCTGGGCGCGGACGGCGTGCTTATGAACACCGCGATTGCGG CCGCGGAGGACGCGGTGAAGATGGCGCGCGCAATGAAGCTGGGCGTGGAGTGCGGGCGGCTGGCGTTTGAATCGGGGCGG ATGGCGAAGAAGCTTTATGCGAGCGCGAGCAGTCCGCTGACTGGAGTGGTGGGGGCGTAG
Upstream 100 bases:
>100_bases TTCGAAGTCGCTCGATGGGCGCAGCGTGTTTGACGATCGGAAGGGGACGAAGGGTCGGGGTTCGGCGCAGCTTTCGCTGT TCCAGTGAGACAATGAAGGC
Downstream 100 bases:
>100_bases GGCAGGATTAGCGAACGCTCCCTAAACGGTCGCGGCTCGGATTGAGCGTGGTGTTGATGGTTGGGGAGTGGAGTGTGGCG AGGCAGTTCGGTCTCCCTCA
Product: thiazole synthase
Products: 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate; 4-hydroxy-benzyl-alcohol; C1 of tyrosine; ThiS protein [C]
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MSDKLTIAGREFASRLIVGTGKYRSFQEMQRCHEASGADMVTVAVRRVNLTDRTKESLIDYIDRSKIFILPNTAGCYTAD DAVRTAMLGREVGLSNWVKLEVIGDEKTLFPDNAGLLEATRILVKEGFAVLPYTNDDIVNARRLIEAGAAAVMPLAAPIG SGLGIQNPTNLRIFREMITEVPVIVDAGVGTASDAAIAMELGADGVLMNTAIAAAEDAVKMARAMKLGVECGRLAFESGR MAKKLYASASSPLTGVVGA
Sequences:
>Translated_259_residues MSDKLTIAGREFASRLIVGTGKYRSFQEMQRCHEASGADMVTVAVRRVNLTDRTKESLIDYIDRSKIFILPNTAGCYTAD DAVRTAMLGREVGLSNWVKLEVIGDEKTLFPDNAGLLEATRILVKEGFAVLPYTNDDIVNARRLIEAGAAAVMPLAAPIG SGLGIQNPTNLRIFREMITEVPVIVDAGVGTASDAAIAMELGADGVLMNTAIAAAEDAVKMARAMKLGVECGRLAFESGR MAKKLYASASSPLTGVVGA >Mature_258_residues SDKLTIAGREFASRLIVGTGKYRSFQEMQRCHEASGADMVTVAVRRVNLTDRTKESLIDYIDRSKIFILPNTAGCYTADD AVRTAMLGREVGLSNWVKLEVIGDEKTLFPDNAGLLEATRILVKEGFAVLPYTNDDIVNARRLIEAGAAAVMPLAAPIGS GLGIQNPTNLRIFREMITEVPVIVDAGVGTASDAAIAMELGADGVLMNTAIAAAEDAVKMARAMKLGVECGRLAFESGRM AKKLYASASSPLTGVVGA
Specific function: Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
COG id: COG2022
COG function: function code H; Uncharacterized enzyme of thiazole biosynthesis
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiG family
Homologues:
Organism=Escherichia coli, GI48994993, Length=255, Percent_Identity=46.6666666666667, Blast_Score=215, Evalue=3e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): THIG_SOLUE (Q01NZ1)
Other databases:
- EMBL: CP000473 - RefSeq: YP_828914.1 - ProteinModelPortal: Q01NZ1 - SMR: Q01NZ1 - STRING: Q01NZ1 - GeneID: 4431347 - GenomeReviews: CP000473_GR - KEGG: sus:Acid_7731 - NMPDR: fig|234267.9.peg.7334 - eggNOG: COG2022 - HOGENOM: HBG296821 - OMA: PIIIDAG - PhylomeDB: Q01NZ1 - ProtClustDB: PRK00208 - GO: GO:0005737 - HAMAP: MF_00443 - InterPro: IPR013785 - InterPro: IPR008867 - Gene3D: G3DSA:3.20.20.70
Pfam domain/function: PF05690 ThiG; SSF110399 ThiG
EC number: NA
Molecular weight: Translated: 27541; Mature: 27410
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: ACT_SITE 99-99 BINDING 160-160
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKLTIAGREFASRLIVGTGKYRSFQEMQRCHEASGADMVTVAVRRVNLTDRTKESLID CCCCEEECCHHHHHHHEECCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHH YIDRSKIFILPNTAGCYTADDAVRTAMLGREVGLSNWVKLEVIGDEKTLFPDNAGLLEAT HHCCCEEEEEECCCCCEECHHHHHHHHHHHHCCCCCEEEEEEECCCCEECCCCCCHHHHH RILVKEGFAVLPYTNDDIVNARRLIEAGAAAVMPLAAPIGSGLGIQNPTNLRIFREMITE HHHHHCCCEEECCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH VPVIVDAGVGTASDAAIAMELGADGVLMNTAIAAAEDAVKMARAMKLGVECGRLAFESGR CCEEEECCCCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCH MAKKLYASASSPLTGVVGA HHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SDKLTIAGREFASRLIVGTGKYRSFQEMQRCHEASGADMVTVAVRRVNLTDRTKESLID CCCEEECCHHHHHHHEECCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHH YIDRSKIFILPNTAGCYTADDAVRTAMLGREVGLSNWVKLEVIGDEKTLFPDNAGLLEAT HHCCCEEEEEECCCCCEECHHHHHHHHHHHHCCCCCEEEEEEECCCCEECCCCCCHHHHH RILVKEGFAVLPYTNDDIVNARRLIEAGAAAVMPLAAPIGSGLGIQNPTNLRIFREMITE HHHHHCCCEEECCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH VPVIVDAGVGTASDAAIAMELGADGVLMNTAIAAAEDAVKMARAMKLGVECGRLAFESGR CCEEEECCCCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCH MAKKLYASASSPLTGVVGA HHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: deoxyxylulose-5-phosphate; ThiS-COSH; L-tyrosine [C]
Specific reaction: deoxyxylulose-5-phosphate + ThiS-COSH + L-tyrosine = 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate + 4-hydroxy-benzyl-alcohol + C1 of tyrosine + ThiS protein [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA