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The map label for this gene is 116626656

Identifier: 116626656

GI number: 116626656

Start: 9565283

End: 9565852

Strand: Direct

Name: 116626656

Synonym: Acid_7625

Alternate gene names: NA

Gene position: 9565283-9565852 (Clockwise)

Preceding gene: 116626651

Following gene: 116626658

Centisome position: 95.98

GC content: 59.12

Gene sequence:

>570_bases
ATGCCGCGCGCAGACTTACGCGAGATTACGCAACGCCTGCAGTTTTGGAACTGTGGTGAGAAGCAGGCGCTCAATGAACT
TGTGCCCCTCGTCTACAGCGAGCTTCGCAAAATCGCGTCAGGCTACTTACGGCGCGAGCGGCCCGACCACACTCTGCGGA
CCACGGCGCTTGTCCACGAAGCGTACATTAGGCTGGCGAACCAAACGCATCTGGAATGCCAGGGTCGTACCCACTTTTAT
GCCATTGCCGCGCACTTGATGCGGCAAATCCTGGTGGACCATGCCCGCGAGCGCAATGCCGTAAAGCGGGGCGGCGGCAA
CAAAGTCGCGCTCGAAGAAGCGGACGCTGCCCTCTCAGAGGGAAGGGCAGTGGACTTGATCCAATTGGATCACGCGTTGG
ACAAACTGGCAGAGCTTGATCCGCGGCAGAGCCGAATTGTGGAGATGAGATTCTTCGCGGGGTTGACCGAAGATGAAATT
GCCGAGGTGCTGGGTATCGCGCCGGTCACGGTGAAGCGCGACTGGCGCGCCGCGAAGTTGTTACTGTTTAAGCTGCTTTC
CCCGCGTTGA

Upstream 100 bases:

>100_bases
GAGTTGCAGCTGGCGATGGCGATTGCGTCGAAGGGAAATGTCGAATGGGTCGCGAATTTGGCTTAATGTAGTGTACAATC
GCCGCTAGGGTGAACGGCTC

Downstream 100 bases:

>100_bases
TTGCCGAGATAACCCGCGAGTTCTGTTGTTTATTGCACGCTTGCGCCCACGAGTGCTACAGCTGTCGCAGCGGCTCAGAG
GAGCGGTCAACGACCACACT

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: Sigma Factor ECF-Like Family Protein; RNA Polymerase Sigma-24 Subunit ECF Subfamily; RNA Polymerase Sigma Factor; ECF Sigma Factor Family Protein; RNA Polymerase ECF-Type Sigma Factor; Sigma Factor; DNA-Directed RNA Polymeracialized Sigma Subunit; Extracytoplasmic Sigma Factor ECF; RNA Polymerase ECF-Subfamily Sigma Factor; RNA Polymerase Sigma-E Factor; ECF Family RNA Polymerase Sigma Factor

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MPRADLREITQRLQFWNCGEKQALNELVPLVYSELRKIASGYLRRERPDHTLRTTALVHEAYIRLANQTHLECQGRTHFY
AIAAHLMRQILVDHARERNAVKRGGGNKVALEEADAALSEGRAVDLIQLDHALDKLAELDPRQSRIVEMRFFAGLTEDEI
AEVLGIAPVTVKRDWRAAKLLLFKLLSPR

Sequences:

>Translated_189_residues
MPRADLREITQRLQFWNCGEKQALNELVPLVYSELRKIASGYLRRERPDHTLRTTALVHEAYIRLANQTHLECQGRTHFY
AIAAHLMRQILVDHARERNAVKRGGGNKVALEEADAALSEGRAVDLIQLDHALDKLAELDPRQSRIVEMRFFAGLTEDEI
AEVLGIAPVTVKRDWRAAKLLLFKLLSPR
>Mature_188_residues
PRADLREITQRLQFWNCGEKQALNELVPLVYSELRKIASGYLRRERPDHTLRTTALVHEAYIRLANQTHLECQGRTHFYA
IAAHLMRQILVDHARERNAVKRGGGNKVALEEADAALSEGRAVDLIQLDHALDKLAELDPRQSRIVEMRFFAGLTEDEIA
EVLGIAPVTVKRDWRAAKLLLFKLLSPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21596; Mature: 21465

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRADLREITQRLQFWNCGEKQALNELVPLVYSELRKIASGYLRRERPDHTLRTTALVHE
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AYIRLANQTHLECQGRTHFYAIAAHLMRQILVDHARERNAVKRGGGNKVALEEADAALSE
HHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHC
GRAVDLIQLDHALDKLAELDPRQSRIVEMRFFAGLTEDEIAEVLGIAPVTVKRDWRAAKL
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCEECCCHHHHHH
LLFKLLSPR
HHHHHHCCC
>Mature Secondary Structure 
PRADLREITQRLQFWNCGEKQALNELVPLVYSELRKIASGYLRRERPDHTLRTTALVHE
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AYIRLANQTHLECQGRTHFYAIAAHLMRQILVDHARERNAVKRGGGNKVALEEADAALSE
HHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHC
GRAVDLIQLDHALDKLAELDPRQSRIVEMRFFAGLTEDEIAEVLGIAPVTVKRDWRAAKL
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCEECCCHHHHHH
LLFKLLSPR
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA