Click here to switch to the map view.

The map label for this gene is petC [H]

Identifier: 116626622

GI number: 116626622

Start: 9510468

End: 9511013

Strand: Direct

Name: petC [H]

Synonym: Acid_7585

Alternate gene names: 116626622

Gene position: 9510468-9511013 (Clockwise)

Preceding gene: 116626621

Following gene: 116626623

Centisome position: 95.43

GC content: 60.07

Gene sequence:

>546_bases
ATGACCGCATCAACCGGAACATCAAGGCGCGCTCTGCTCGCCAAAGTGGGACTTCTATTTAACGGAATCGTGGGTGCGAT
TCTGGCCGTCCCCGTCCTGCGTTATCTTCTGTCACCCATTACACGCGGACGGAAACCAGGTTATGAGTCCTGGCTGCCGC
TTGGCGGACTGGAACAGTTTCCGGCGGGGCAGACCCGGCTCGCGACCTTTCGGAATCCGGCCGCGGATTCCTGGGATGGC
CAGACCGCGGATATTCCCTGTTGGGTCAGAAATCTCGACGGCAAGAATTTTCAGGTCTTTGCGATCAACTGCGCGCACCT
CGGGTGTCCCGTGCGCTGGTTTCCGCAGTCCAACCTCTTCATGTGTCCTTGCCATGGCGGAGTTTACTATTCCGATGGTT
CCCAGGCCGCCGGCCCTCCTCCTCGCGGCCTGTTCCGGTACATCTATCGTGTCGAGGCGGGAAGGCTCCTCATCAATGGG
GGCGAAATGCCGACCACTGGGAGCCCATCCGCGAATAGGTATGGAGTGAAGCCGCCGTGCGCCTGA

Upstream 100 bases:

>100_bases
ACATCTCCAACGTTGTCGCCTGGCTGGCATCACAGCGTCCTCAATTTCCGGGCCCCCCATCCCTTAACCCATCCGTCGGC
ACCGCAACGAGAACCATTCC

Downstream 100 bases:

>100_bases
TTGGAAGGGTCGGCGCCTGGCTCGACCACCGGCTCAAGCTGGGCGCGTCGATTCGCGAAACAGTCACGCACCGGGTGCCC
CGGAATTCGGGGAGTTGGCT

Product: Rieske (2Fe-2S) domain-containing protein

Products: NA

Alternate protein names: Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein; Rieske iron-sulfur protein; ISP; RISP [H]

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MTASTGTSRRALLAKVGLLFNGIVGAILAVPVLRYLLSPITRGRKPGYESWLPLGGLEQFPAGQTRLATFRNPAADSWDG
QTADIPCWVRNLDGKNFQVFAINCAHLGCPVRWFPQSNLFMCPCHGGVYYSDGSQAAGPPPRGLFRYIYRVEAGRLLING
GEMPTTGSPSANRYGVKPPCA

Sequences:

>Translated_181_residues
MTASTGTSRRALLAKVGLLFNGIVGAILAVPVLRYLLSPITRGRKPGYESWLPLGGLEQFPAGQTRLATFRNPAADSWDG
QTADIPCWVRNLDGKNFQVFAINCAHLGCPVRWFPQSNLFMCPCHGGVYYSDGSQAAGPPPRGLFRYIYRVEAGRLLING
GEMPTTGSPSANRYGVKPPCA
>Mature_180_residues
TASTGTSRRALLAKVGLLFNGIVGAILAVPVLRYLLSPITRGRKPGYESWLPLGGLEQFPAGQTRLATFRNPAADSWDGQ
TADIPCWVRNLDGKNFQVFAINCAHLGCPVRWFPQSNLFMCPCHGGVYYSDGSQAAGPPPRGLFRYIYRVEAGRLLINGG
EMPTTGSPSANRYGVKPPCA

Specific function: Component of the green S-bacteria bc-complex which consists of the Rieske protein and cytochrome b subunit and which appears to lack a cytochrome c1-equivalent. This complex has a comparatively low redox potential [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014909
- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805 [H]

Pfam domain/function: PF08802 CytB6-F_Fe-S; PF00355 Rieske [H]

EC number: =1.10.99.1 [H]

Molecular weight: Translated: 19558; Mature: 19427

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASTGTSRRALLAKVGLLFNGIVGAILAVPVLRYLLSPITRGRKPGYESWLPLGGLEQF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PAGQTRLATFRNPAADSWDGQTADIPCWVRNLDGKNFQVFAINCAHLGCPVRWFPQSNLF
CCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEEHHCCCCEEECCCCCEE
MCPCHGGVYYSDGSQAAGPPPRGLFRYIYRVEAGRLLINGGEMPTTGSPSANRYGVKPPC
EEECCCCEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCC
A
C
>Mature Secondary Structure 
TASTGTSRRALLAKVGLLFNGIVGAILAVPVLRYLLSPITRGRKPGYESWLPLGGLEQF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PAGQTRLATFRNPAADSWDGQTADIPCWVRNLDGKNFQVFAINCAHLGCPVRWFPQSNLF
CCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEEHHCCCCEEECCCCCEE
MCPCHGGVYYSDGSQAAGPPPRGLFRYIYRVEAGRLLINGGEMPTTGSPSANRYGVKPPC
EEECCCCEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10976061; 12093901 [H]