| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116626492
Identifier: 116626492
GI number: 116626492
Start: 9346042
End: 9348318
Strand: Direct
Name: 116626492
Synonym: Acid_7455
Alternate gene names: NA
Gene position: 9346042-9348318 (Clockwise)
Preceding gene: 116626485
Following gene: 116626493
Centisome position: 93.78
GC content: 68.34
Gene sequence:
>2277_bases GTGGCTGCTCTCACTCTTCCGGGTTCCCTGCTCGCCCAACCGTTCCACGCGAAGGCTTCCGCGGAAGGCCCGGTTACCGG CACGCACTCGCCCGCCGAGGGAAAAGGAGATGCGGCCTTCCCCAGCCTACTCGAAGGGCTGGTTGGCGAGCATGCGGCTG CAGCCTCGGGAAGCGCGGCCGACGCTCTGGCAGGGTCCGGTGAGAAGCTGCCGGCCGGCCAGAAACGCAACTCCGGCAAC CACACGAGGGGCAAATTCACGGAGTTGGAGCGCCTCATCGCGCGGACCGGGAGAGTTCGCTTGCCAGAGAAAGACGCATC GCAAACCGACATCGTTAGCGTCCGATCGACGGACGGGGAACCGGCCGTTCCCGAGGTAAAGCAGGCGGCACAGCGAGTGG CGGCGCCGGTAGTGACGGAGTCCCAAACCACCGAGGCCGGCGCGCCGGCGGAACAGACGAGCCTTCCCGGCCTGCGTATC GCGGAGCCGCCAACGCAGCTCGTCCACCACTTGCCGGCGACAGTTCGTGCGACTACTCTCGCGCTTGGTGGCAGCCGCGA TACCCAGTCCGAGAACAAAGTCGAGACCCTGAAGGTGCCACTGACGGCGCAGTCGATCGGGACGGCTCCCCCGGAGCAGC GCGCAGCAGCGGTGCCCGGCGTCGCAATACCGGAGCGAGCACATCTGCGAACGCCGAAATTGACTGCGGCCGCTGGCGCG CACCGCCGAGCGACCGGAGCAGCGCTGCCCGACCTACCGTCGGTGGACAAGGCGGACGTACTCTCGGAAGGCGGCACCGC GGAAGATGCCCGGCCCGAACCGGACGGCGCAGTGCCTTTGCCTCGGCCGGCATTGCGCGCGGCGGCGGAACAGCCGGCAA TCGAATGGGACCCCCAGGCTGGGCGACTCGCCGCTGTCCGGTCGGCGGCGAACGAGGCGGCGCGTCCTTCCGCCCGGACG TCTACCCCCCTGCGTGCTGCCAGGCAATCTACGGTCACGAATCCCGAACGCCACCAGCAGACCGGCGCGGCCGGCGACCA ACCCGCGCCTCCGCCGCTCGCGGAGCTGAAGATGCCGGTTTCCGCGGCTCCGACGGTTGTCCCCGAAAAGCCCCAGCAGG GTGTGAGTCCGGTGGCCGGTGCACCCCCTGATGGATCCCCAGACCGCTCGCTTTCGCCCAGCGTGTTGGCGACTGGTGTG AAGCCTGCATCGCCGTCCGTGTCTGACGAGTTGCCGCCCGCGGGGCATCTTGACGCCCGGTTGAAATCTACCGTGTCCCC GGTGGCACCGGTCGCAGACCAGTCGCCAGATTCCATCGCCAGGCCATCCACTCGCAACGCCGATAACCTGGCGCCCGGCG GCGCAAAGGTGCGCACGCTGTCGATCGCGAGCACGGATCGCGGCGAAGTAGCCTTCGAGGTCGAGCTGCGCTCCATCGGG AAGCAGCCGCCGACGATCGAAGGGGTGACGAACGAAAGGGTGATGCCGCCGGCGGCACCGGCCTCAGTGAAAACAGTAGC GCCGGAGCCCGCAGCGATAGAGGCGGTGGCCGGCCAGCCGACACCGGCGCCGCGCGAAGAGGTCGCGCAAATCGCGGAGG TGCCCGCCCAGGGCGGCGACACGAACCGTCCCGCGACAGGCGAGCGCGACAAGAAACAGGCGACTCCCGAGCGTAGTCCA AGGCCTGCTCCGCCGGTCGATTCGCATTCCGAAAGCGCGACTGCGCTGCCCGGCGTCAAGGTCTCGAACTGGACGCAGTC AGGGATGTCGCGGCAGGAAGGCATGCCCGAACCGGCAGCGCCGCCGGATGCAGCCCCGGCGCGGCCGGACGAAACGTCGG CGGCGAGGATGGATGCGAAGGCAGAGGTCCAGGCGGCCTCGGCGCACGAAATCAAGCTCGAGGTTTCGGGCGGGGAGCGG CGCGTGGAGGTGCGGCTTTCCGAACGCGGAGGCGAGGTGCGGATTGCGGTTCGCACTCCCGACAGCCATCTGGCCGGCAC TCTGCGTGAGAACCTGCCCGAGCTGACATCGCGATTCGCTGAAAGCGGGCTGCGCAGTGAAATCTGGCGCCCGGGCGGCT CCCTGGCTGGCGAGTCGCGGCATGCGCAGGAGGCCGCGCTGGGAAACCCGGCGCAGGACGCGGAATCGCAATCGCGCGGC AATGGCGGCGAACAGCAGCGCGACGCCCAGGAGCGGCAGCAACGAAGTTTCCAGGAACCAAAGAACGACAAAGAGAAAGG AAAGGATTTTGCATGGCTTATGTCATCCCTTCGATAA
Upstream 100 bases:
>100_bases CAAACCGAGGATAACGCCAGTTTCTTGTCGCGGTGCCACGAAGTAACTCGTTGAAAATGGGGCGCCGAGCTTTGGCCTGC GATCTGCAATCGCAGACCGC
Downstream 100 bases:
>100_bases GAATGGCTCCCCGTCCGGCGTATACACCGCGAACCGGGGGGCGGACGGCAAGCACCAGCACAGCCGTATCTTCCGGCGCC AAACCGGATTTTCAGACGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 758; Mature: 757
Protein sequence:
>758_residues MAALTLPGSLLAQPFHAKASAEGPVTGTHSPAEGKGDAAFPSLLEGLVGEHAAAASGSAADALAGSGEKLPAGQKRNSGN HTRGKFTELERLIARTGRVRLPEKDASQTDIVSVRSTDGEPAVPEVKQAAQRVAAPVVTESQTTEAGAPAEQTSLPGLRI AEPPTQLVHHLPATVRATTLALGGSRDTQSENKVETLKVPLTAQSIGTAPPEQRAAAVPGVAIPERAHLRTPKLTAAAGA HRRATGAALPDLPSVDKADVLSEGGTAEDARPEPDGAVPLPRPALRAAAEQPAIEWDPQAGRLAAVRSAANEAARPSART STPLRAARQSTVTNPERHQQTGAAGDQPAPPPLAELKMPVSAAPTVVPEKPQQGVSPVAGAPPDGSPDRSLSPSVLATGV KPASPSVSDELPPAGHLDARLKSTVSPVAPVADQSPDSIARPSTRNADNLAPGGAKVRTLSIASTDRGEVAFEVELRSIG KQPPTIEGVTNERVMPPAAPASVKTVAPEPAAIEAVAGQPTPAPREEVAQIAEVPAQGGDTNRPATGERDKKQATPERSP RPAPPVDSHSESATALPGVKVSNWTQSGMSRQEGMPEPAAPPDAAPARPDETSAARMDAKAEVQAASAHEIKLEVSGGER RVEVRLSERGGEVRIAVRTPDSHLAGTLRENLPELTSRFAESGLRSEIWRPGGSLAGESRHAQEAALGNPAQDAESQSRG NGGEQQRDAQERQQRSFQEPKNDKEKGKDFAWLMSSLR
Sequences:
>Translated_758_residues MAALTLPGSLLAQPFHAKASAEGPVTGTHSPAEGKGDAAFPSLLEGLVGEHAAAASGSAADALAGSGEKLPAGQKRNSGN HTRGKFTELERLIARTGRVRLPEKDASQTDIVSVRSTDGEPAVPEVKQAAQRVAAPVVTESQTTEAGAPAEQTSLPGLRI AEPPTQLVHHLPATVRATTLALGGSRDTQSENKVETLKVPLTAQSIGTAPPEQRAAAVPGVAIPERAHLRTPKLTAAAGA HRRATGAALPDLPSVDKADVLSEGGTAEDARPEPDGAVPLPRPALRAAAEQPAIEWDPQAGRLAAVRSAANEAARPSART STPLRAARQSTVTNPERHQQTGAAGDQPAPPPLAELKMPVSAAPTVVPEKPQQGVSPVAGAPPDGSPDRSLSPSVLATGV KPASPSVSDELPPAGHLDARLKSTVSPVAPVADQSPDSIARPSTRNADNLAPGGAKVRTLSIASTDRGEVAFEVELRSIG KQPPTIEGVTNERVMPPAAPASVKTVAPEPAAIEAVAGQPTPAPREEVAQIAEVPAQGGDTNRPATGERDKKQATPERSP RPAPPVDSHSESATALPGVKVSNWTQSGMSRQEGMPEPAAPPDAAPARPDETSAARMDAKAEVQAASAHEIKLEVSGGER RVEVRLSERGGEVRIAVRTPDSHLAGTLRENLPELTSRFAESGLRSEIWRPGGSLAGESRHAQEAALGNPAQDAESQSRG NGGEQQRDAQERQQRSFQEPKNDKEKGKDFAWLMSSLR >Mature_757_residues AALTLPGSLLAQPFHAKASAEGPVTGTHSPAEGKGDAAFPSLLEGLVGEHAAAASGSAADALAGSGEKLPAGQKRNSGNH TRGKFTELERLIARTGRVRLPEKDASQTDIVSVRSTDGEPAVPEVKQAAQRVAAPVVTESQTTEAGAPAEQTSLPGLRIA EPPTQLVHHLPATVRATTLALGGSRDTQSENKVETLKVPLTAQSIGTAPPEQRAAAVPGVAIPERAHLRTPKLTAAAGAH RRATGAALPDLPSVDKADVLSEGGTAEDARPEPDGAVPLPRPALRAAAEQPAIEWDPQAGRLAAVRSAANEAARPSARTS TPLRAARQSTVTNPERHQQTGAAGDQPAPPPLAELKMPVSAAPTVVPEKPQQGVSPVAGAPPDGSPDRSLSPSVLATGVK PASPSVSDELPPAGHLDARLKSTVSPVAPVADQSPDSIARPSTRNADNLAPGGAKVRTLSIASTDRGEVAFEVELRSIGK QPPTIEGVTNERVMPPAAPASVKTVAPEPAAIEAVAGQPTPAPREEVAQIAEVPAQGGDTNRPATGERDKKQATPERSPR PAPPVDSHSESATALPGVKVSNWTQSGMSRQEGMPEPAAPPDAAPARPDETSAARMDAKAEVQAASAHEIKLEVSGGERR VEVRLSERGGEVRIAVRTPDSHLAGTLRENLPELTSRFAESGLRSEIWRPGGSLAGESRHAQEAALGNPAQDAESQSRGN GGEQQRDAQERQQRSFQEPKNDKEKGKDFAWLMSSLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78420; Mature: 78288
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALTLPGSLLAQPFHAKASAEGPVTGTHSPAEGKGDAAFPSLLEGLVGEHAAAASGSAA CCEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH DALAGSGEKLPAGQKRNSGNHTRGKFTELERLIARTGRVRLPEKDASQTDIVSVRSTDGE HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCCCEEEEEECCCCC PAVPEVKQAAQRVAAPVVTESQTTEAGAPAEQTSLPGLRIAEPPTQLVHHLPATVRATTL CCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCEECCCHHHHHHHCCHHHHHEEE ALGGSRDTQSENKVETLKVPLTAQSIGTAPPEQRAAAVPGVAIPERAHLRTPKLTAAAGA EECCCCCCCCCCCEEEEEECEEHHHHCCCCCHHHHHCCCCCCCCCHHHCCCCCHHHHCCC HRRATGAALPDLPSVDKADVLSEGGTAEDARPEPDGAVPLPRPALRAAAEQPAIEWDPQA CHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC GRLAAVRSAANEAARPSARTSTPLRAARQSTVTNPERHQQTGAAGDQPAPPPLAELKMPV CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHCCCC SAAPTVVPEKPQQGVSPVAGAPPDGSPDRSLSPSVLATGVKPASPSVSDELPPAGHLDAR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHH LKSTVSPVAPVADQSPDSIARPSTRNADNLAPGGAKVRTLSIASTDRGEVAFEVELRSIG HHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEHHHCC KQPPTIEGVTNERVMPPAAPASVKTVAPEPAAIEAVAGQPTPAPREEVAQIAEVPAQGGD CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCC TNRPATGERDKKQATPERSPRPAPPVDSHSESATALPGVKVSNWTQSGMSRQEGMPEPAA CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHCCCCCCC PPDAAPARPDETSAARMDAKAEVQAASAHEIKLEVSGGERRVEVRLSERGGEVRIAVRTP CCCCCCCCCCCCHHHHCCCHHHHEECCCEEEEEEECCCCEEEEEEEECCCCEEEEEEECC DSHLAGTLRENLPELTSRFAESGLRSEIWRPGGSLAGESRHAQEAALGNPAQDAESQSRG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCC NGGEQQRDAQERQQRSFQEPKNDKEKGKDFAWLMSSLR CCCHHHHHHHHHHHHHHCCCCCHHHHCHHHHHHHHHCC >Mature Secondary Structure AALTLPGSLLAQPFHAKASAEGPVTGTHSPAEGKGDAAFPSLLEGLVGEHAAAASGSAA CEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH DALAGSGEKLPAGQKRNSGNHTRGKFTELERLIARTGRVRLPEKDASQTDIVSVRSTDGE HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCCCEEEEEECCCCC PAVPEVKQAAQRVAAPVVTESQTTEAGAPAEQTSLPGLRIAEPPTQLVHHLPATVRATTL CCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCEECCCHHHHHHHCCHHHHHEEE ALGGSRDTQSENKVETLKVPLTAQSIGTAPPEQRAAAVPGVAIPERAHLRTPKLTAAAGA EECCCCCCCCCCCEEEEEECEEHHHHCCCCCHHHHHCCCCCCCCCHHHCCCCCHHHHCCC HRRATGAALPDLPSVDKADVLSEGGTAEDARPEPDGAVPLPRPALRAAAEQPAIEWDPQA CHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC GRLAAVRSAANEAARPSARTSTPLRAARQSTVTNPERHQQTGAAGDQPAPPPLAELKMPV CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHCCCC SAAPTVVPEKPQQGVSPVAGAPPDGSPDRSLSPSVLATGVKPASPSVSDELPPAGHLDAR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHH LKSTVSPVAPVADQSPDSIARPSTRNADNLAPGGAKVRTLSIASTDRGEVAFEVELRSIG HHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEHHHCC KQPPTIEGVTNERVMPPAAPASVKTVAPEPAAIEAVAGQPTPAPREEVAQIAEVPAQGGD CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCC TNRPATGERDKKQATPERSPRPAPPVDSHSESATALPGVKVSNWTQSGMSRQEGMPEPAA CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHCCCCCCC PPDAAPARPDETSAARMDAKAEVQAASAHEIKLEVSGGERRVEVRLSERGGEVRIAVRTP CCCCCCCCCCCCHHHHCCCHHHHEECCCEEEEEEECCCCEEEEEEEECCCCEEEEEEECC DSHLAGTLRENLPELTSRFAESGLRSEIWRPGGSLAGESRHAQEAALGNPAQDAESQSRG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCC NGGEQQRDAQERQQRSFQEPKNDKEKGKDFAWLMSSLR CCCHHHHHHHHHHHHHHCCCCCHHHHCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA