Click here to switch to the map view.

The map label for this gene is yvdB [H]

Identifier: 116626268

GI number: 116626268

Start: 9077710

End: 9079404

Strand: Direct

Name: yvdB [H]

Synonym: Acid_7228

Alternate gene names: 116626268

Gene position: 9077710-9079404 (Clockwise)

Preceding gene: 116626267

Following gene: 116626269

Centisome position: 91.09

GC content: 63.42

Gene sequence:

>1695_bases
GTGACCGCCGTTCCCGAAACTCCGCTGGATCACTGGATGCCCAAGCTGGTGCTTTGCCTGCGCCAGTACACCTGGCAGAT
CTTCGTCAAGGATCTGATCGCCGGGTTGACGGTGGGATTGGTCGCGCTCCCGCTTGCCATGGCATTCGGCATCGCGAGCG
GGGTCACCCCGCAGGCCGGGATCTATACCGCCGTCGTCGCGGGGTTCATTATCTCCGCACTGGGCGGATCGCGGGTGCAG
ATTGGCGGGCCCACTGGCGCATTCGTCGTCATTGTCTCCGGGATCGTCCTCAAATTCGGAATCTCCGGCCTTTTGATGGT
GACCGCAATGGCCGGCGTTCTGCTGCTCGTCATGGGCGCGACGGGACTGGGAACGGCGGTGCGCTTCATTCCGCGGCCGG
TCACGATCGGGTTCACCAACGGGATCGCCGTGCTGATCGCCTCCACGCAGATCCGTGATTTTTTGGGGCTGAAGATCGCC
GCCGTGCCCAGCGAATTTCTGCTGAGGATGGAAAAGCTGGGCGCGCACCTGAACACTATCGATCCCGTGACGGCCGTGGT
AGGCGGCGTTTCGCTGGGGATTATTCTCCTCTGGCCGCTGGTCACGAAGCGCGTTCCCGGCTCGATTGTGGCGCTGCTGG
CGGGAACGGCACTGGCCATCGTGCTCAAGCTTCCGGTGGAGACGATCGGCAGCAAATTCGGCGGAATTCCAACCGGGCTG
CCCACTTTCCACATTCCGCAATTCCGCGCCGACCTGATTCTGCCGCTGCTGCCTTCGGCAATGACGGTCGCGCTGCTGGC
CGCGGTGGAAAGCCTGCTCTCGGCTGTGGTGGCGGACGGGATGAGCGGCGACAAACACAATTCCAACGTGGAATTGATCG
CGCAGGGTATCGCCAACGTGATCTCTCCGATGGTTGGCGGATTGCCCGCCACCGGGGCGATCGCGCGCACGGCGACCAAC
ATCCGAAGCGGCGCCAAGACGCCGGTTTCGGGCATGATCCATGCGCTGACGCTGCTCATGATTCTGCTGGTGGCGGCGCC
GCTGGCTAAGTTCATTCCGCTGGCGACACTGGCCGCGGTGCTGTTCGTGGTGGCCTACAACATGGGCGAATGGCGCGAGA
TCGTCGGGATCCTGCGGCTTGGCCGCGCGGAGCGGGTGGTCTGGGTGGCGACGTTCGGCCTCACCGTGGTTGCCGACCTG
ACGGTGGCGGTGGAAGTCGGCATGACACTGGCCGCGCTGCTCTACATTTACCGTGTCTCGCAGACCACGACGATCGCGCC
GGTGACGGACGCTTATATCGAAAAGGGGCGGCCTCACGTGCTTCAGGGCAAGGACATTCCCCAATTTGTAACTATTCTGA
GGATCCACGGCCCCTTCCTCTTCGGCACTACGGAGAAGTTGGCGGACGCGACCGAAGACCTCAGCCATTACGGCCACGTC
GTAATCCTGCGCGTGCGCAATATGACCGCGATCGACGCCACCGGCTTGTACGCTTTGGAAAAACTGGCCGAGCGGTTGCA
CACGACGGGGCGTCACGTCCTTGTGTGTGGGGCACGACGCCAGCCGCGCACGATGCTGGAGCGCGCCGACTTTGTCAGCG
TCATCGGGCAGGAAAACATCCTGCCGCACGTGGATGCCGCGCTGGCACGCGCACGCATCCTGCATCACTTCGCGGAAAAT
CAGCGGTCGGCGTAG

Upstream 100 bases:

>100_bases
TGATCGACGTGCTGGACATCATGCGCCGCTACTTTCAGGCGCAACTGGCGGAGACAATGGCCGCCCTTGGGGAGATGGAG
CGGGAGCAAGAGGTGACGCG

Downstream 100 bases:

>100_bases
ACGGGCACTGATCGTAATTGCCTGGTCTGCAAGCTTGTGTTGTCGGGCACGGGATCGTAGACATACAAGCCCGCGAACCG
GCTGACACGGTAAAAAGAGT

Product: sulfate transporter

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 564; Mature: 563

Protein sequence:

>564_residues
MTAVPETPLDHWMPKLVLCLRQYTWQIFVKDLIAGLTVGLVALPLAMAFGIASGVTPQAGIYTAVVAGFIISALGGSRVQ
IGGPTGAFVVIVSGIVLKFGISGLLMVTAMAGVLLLVMGATGLGTAVRFIPRPVTIGFTNGIAVLIASTQIRDFLGLKIA
AVPSEFLLRMEKLGAHLNTIDPVTAVVGGVSLGIILLWPLVTKRVPGSIVALLAGTALAIVLKLPVETIGSKFGGIPTGL
PTFHIPQFRADLILPLLPSAMTVALLAAVESLLSAVVADGMSGDKHNSNVELIAQGIANVISPMVGGLPATGAIARTATN
IRSGAKTPVSGMIHALTLLMILLVAAPLAKFIPLATLAAVLFVVAYNMGEWREIVGILRLGRAERVVWVATFGLTVVADL
TVAVEVGMTLAALLYIYRVSQTTTIAPVTDAYIEKGRPHVLQGKDIPQFVTILRIHGPFLFGTTEKLADATEDLSHYGHV
VILRVRNMTAIDATGLYALEKLAERLHTTGRHVLVCGARRQPRTMLERADFVSVIGQENILPHVDAALARARILHHFAEN
QRSA

Sequences:

>Translated_564_residues
MTAVPETPLDHWMPKLVLCLRQYTWQIFVKDLIAGLTVGLVALPLAMAFGIASGVTPQAGIYTAVVAGFIISALGGSRVQ
IGGPTGAFVVIVSGIVLKFGISGLLMVTAMAGVLLLVMGATGLGTAVRFIPRPVTIGFTNGIAVLIASTQIRDFLGLKIA
AVPSEFLLRMEKLGAHLNTIDPVTAVVGGVSLGIILLWPLVTKRVPGSIVALLAGTALAIVLKLPVETIGSKFGGIPTGL
PTFHIPQFRADLILPLLPSAMTVALLAAVESLLSAVVADGMSGDKHNSNVELIAQGIANVISPMVGGLPATGAIARTATN
IRSGAKTPVSGMIHALTLLMILLVAAPLAKFIPLATLAAVLFVVAYNMGEWREIVGILRLGRAERVVWVATFGLTVVADL
TVAVEVGMTLAALLYIYRVSQTTTIAPVTDAYIEKGRPHVLQGKDIPQFVTILRIHGPFLFGTTEKLADATEDLSHYGHV
VILRVRNMTAIDATGLYALEKLAERLHTTGRHVLVCGARRQPRTMLERADFVSVIGQENILPHVDAALARARILHHFAEN
QRSA
>Mature_563_residues
TAVPETPLDHWMPKLVLCLRQYTWQIFVKDLIAGLTVGLVALPLAMAFGIASGVTPQAGIYTAVVAGFIISALGGSRVQI
GGPTGAFVVIVSGIVLKFGISGLLMVTAMAGVLLLVMGATGLGTAVRFIPRPVTIGFTNGIAVLIASTQIRDFLGLKIAA
VPSEFLLRMEKLGAHLNTIDPVTAVVGGVSLGIILLWPLVTKRVPGSIVALLAGTALAIVLKLPVETIGSKFGGIPTGLP
TFHIPQFRADLILPLLPSAMTVALLAAVESLLSAVVADGMSGDKHNSNVELIAQGIANVISPMVGGLPATGAIARTATNI
RSGAKTPVSGMIHALTLLMILLVAAPLAKFIPLATLAAVLFVVAYNMGEWREIVGILRLGRAERVVWVATFGLTVVADLT
VAVEVGMTLAALLYIYRVSQTTTIAPVTDAYIEKGRPHVLQGKDIPQFVTILRIHGPFLFGTTEKLADATEDLSHYGHVV
ILRVRNMTAIDATGLYALEKLAERLHTTGRHVLVCGARRQPRTMLERADFVSVIGQENILPHVDAALARARILHHFAENQ
RSA

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI262206105, Length=427, Percent_Identity=26.6978922716628, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI262206075, Length=427, Percent_Identity=26.6978922716628, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI262206069, Length=427, Percent_Identity=26.6978922716628, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI262206063, Length=427, Percent_Identity=26.6978922716628, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI45827800, Length=520, Percent_Identity=20.9615384615385, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI39752683, Length=520, Percent_Identity=20.9615384615385, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI45827802, Length=454, Percent_Identity=20.9251101321586, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI16306483, Length=498, Percent_Identity=21.285140562249, Blast_Score=86, Evalue=7e-17,
Organism=Homo sapiens, GI20336282, Length=499, Percent_Identity=21.2424849699399, Blast_Score=86, Evalue=9e-17,
Organism=Homo sapiens, GI94721259, Length=464, Percent_Identity=21.3362068965517, Blast_Score=86, Evalue=9e-17,
Organism=Homo sapiens, GI94721253, Length=464, Percent_Identity=21.3362068965517, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI94721257, Length=464, Percent_Identity=21.3362068965517, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI94721255, Length=464, Percent_Identity=21.3362068965517, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI4505697, Length=504, Percent_Identity=22.0238095238095, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI269784651, Length=519, Percent_Identity=19.6531791907514, Blast_Score=80, Evalue=6e-15,
Organism=Homo sapiens, GI4557535, Length=532, Percent_Identity=22.7443609022556, Blast_Score=78, Evalue=3e-14,
Organism=Homo sapiens, GI47131207, Length=502, Percent_Identity=24.1035856573705, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI20336272, Length=502, Percent_Identity=24.1035856573705, Blast_Score=70, Evalue=4e-12,
Organism=Escherichia coli, GI87081859, Length=566, Percent_Identity=40.2826855123675, Blast_Score=341, Evalue=8e-95,
Organism=Caenorhabditis elegans, GI17566848, Length=597, Percent_Identity=23.4505862646566, Blast_Score=113, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17551690, Length=602, Percent_Identity=22.7574750830565, Blast_Score=111, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI86564196, Length=644, Percent_Identity=21.8944099378882, Blast_Score=105, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI86565215, Length=555, Percent_Identity=24.3243243243243, Blast_Score=104, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17562578, Length=643, Percent_Identity=20.8398133748056, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI86564876, Length=542, Percent_Identity=22.5092250922509, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI193203292, Length=513, Percent_Identity=21.2475633528265, Blast_Score=74, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6325260, Length=572, Percent_Identity=21.5034965034965, Blast_Score=99, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6323121, Length=484, Percent_Identity=23.1404958677686, Blast_Score=98, Evalue=4e-21,
Organism=Drosophila melanogaster, GI85815873, Length=441, Percent_Identity=28.5714285714286, Blast_Score=145, Evalue=6e-35,
Organism=Drosophila melanogaster, GI19922482, Length=519, Percent_Identity=26.2042389210019, Blast_Score=134, Evalue=1e-31,
Organism=Drosophila melanogaster, GI21355087, Length=448, Percent_Identity=25, Blast_Score=130, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24647160, Length=448, Percent_Identity=25, Blast_Score=129, Evalue=4e-30,
Organism=Drosophila melanogaster, GI24663084, Length=433, Percent_Identity=29.3302540415704, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI21357695, Length=433, Percent_Identity=29.3302540415704, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24649801, Length=454, Percent_Identity=25.9911894273128, Blast_Score=124, Evalue=3e-28,
Organism=Drosophila melanogaster, GI21358229, Length=466, Percent_Identity=25.5364806866953, Blast_Score=110, Evalue=4e-24,
Organism=Drosophila melanogaster, GI24651449, Length=464, Percent_Identity=23.4913793103448, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI21358633, Length=589, Percent_Identity=21.5619694397284, Blast_Score=105, Evalue=9e-23,
Organism=Drosophila melanogaster, GI24666186, Length=323, Percent_Identity=22.6006191950464, Blast_Score=75, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 59525; Mature: 59394

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAVPETPLDHWMPKLVLCLRQYTWQIFVKDLIAGLTVGLVALPLAMAFGIASGVTPQAG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
IYTAVVAGFIISALGGSRVQIGGPTGAFVVIVSGIVLKFGISGLLMVTAMAGVLLLVMGA
HHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TGLGTAVRFIPRPVTIGFTNGIAVLIASTQIRDFLGLKIAAVPSEFLLRMEKLGAHLNTI
CCHHHHHHHCCCCEEEEECCCEEEEEEHHHHHHHHCCCCEECCHHHHHHHHHHCCCCCCC
DPVTAVVGGVSLGIILLWPLVTKRVPGSIVALLAGTALAIVLKLPVETIGSKFGGIPTGL
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC
PTFHIPQFRADLILPLLPSAMTVALLAAVESLLSAVVADGMSGDKHNSNVELIAQGIANV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
ISPMVGGLPATGAIARTATNIRSGAKTPVSGMIHALTLLMILLVAAPLAKFIPLATLAAV
HHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFVVAYNMGEWREIVGILRLGRAERVVWVATFGLTVVADLTVAVEVGMTLAALLYIYRVS
HHHHHHCCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QTTTIAPVTDAYIEKGRPHVLQGKDIPQFVTILRIHGPFLFGTTEKLADATEDLSHYGHV
CCCEECCCHHHHHHCCCCCEECCCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCE
VILRVRNMTAIDATGLYALEKLAERLHTTGRHVLVCGARRQPRTMLERADFVSVIGQENI
EEEEECCCEEECHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCC
LPHVDAALARARILHHFAENQRSA
CCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TAVPETPLDHWMPKLVLCLRQYTWQIFVKDLIAGLTVGLVALPLAMAFGIASGVTPQAG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
IYTAVVAGFIISALGGSRVQIGGPTGAFVVIVSGIVLKFGISGLLMVTAMAGVLLLVMGA
HHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TGLGTAVRFIPRPVTIGFTNGIAVLIASTQIRDFLGLKIAAVPSEFLLRMEKLGAHLNTI
CCHHHHHHHCCCCEEEEECCCEEEEEEHHHHHHHHCCCCEECCHHHHHHHHHHCCCCCCC
DPVTAVVGGVSLGIILLWPLVTKRVPGSIVALLAGTALAIVLKLPVETIGSKFGGIPTGL
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC
PTFHIPQFRADLILPLLPSAMTVALLAAVESLLSAVVADGMSGDKHNSNVELIAQGIANV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
ISPMVGGLPATGAIARTATNIRSGAKTPVSGMIHALTLLMILLVAAPLAKFIPLATLAAV
HHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFVVAYNMGEWREIVGILRLGRAERVVWVATFGLTVVADLTVAVEVGMTLAALLYIYRVS
HHHHHHCCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QTTTIAPVTDAYIEKGRPHVLQGKDIPQFVTILRIHGPFLFGTTEKLADATEDLSHYGHV
CCCEECCCHHHHHHCCCCCEECCCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCE
VILRVRNMTAIDATGLYALEKLAERLHTTGRHVLVCGARRQPRTMLERADFVSVIGQENI
EEEEECCCEEECHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCC
LPHVDAALARARILHHFAENQRSA
CCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]