Click here to switch to the map view.

The map label for this gene is 116626148

Identifier: 116626148

GI number: 116626148

Start: 8922659

End: 8923138

Strand: Direct

Name: 116626148

Synonym: Acid_7107

Alternate gene names: NA

Gene position: 8922659-8923138 (Clockwise)

Preceding gene: 116626145

Following gene: 116626154

Centisome position: 89.53

GC content: 64.58

Gene sequence:

>480_bases
ATGGACACAGCCGCACAAGGCATCCTCAATCGCGATGAAATGGAGAGCAGGCGCCTGTTAGCCGCACAGGACCTGCAAAC
GGGGCTCACGCAGTCCCAAGTCGCCCGGAAATTCGGGGTGAGCCGCACCACGGCGTCCCGATGGAACCGCTCGCTGAGCG
GCAACGGAGTGGAGGCGCTACGCAAGCGGCGCGCTCCAGGCCGTCCCAGCCGTCTCACGGCCGATCAACTCAAGATTCTG
ACTGAAACCTATCAGGCGGGACCGCGCGCGTCGGGCTTCGATACCGACCGCTGGACCACAGCTCGCTTCGCGGACGCGAT
TTTCGCGCTCTTCGGAGTACGCTATGACCCGGATCACGCGGGCCGCATCATGCACCGGCTCGGTCTGCGCGAACGGCGCC
GCTCGAAGCGAATGCCGGAAGTGTACACATTCACACTCCCGACAGTCGAGCTGCCGGAAGTGCAGTCGGGCGTAGCGTAG

Upstream 100 bases:

>100_bases
CCGTCCGCATCCCGCGATTTTCTGCAAAAAACAATTTGCAACGAAAATGTTTTCTGCTATTCTAGGTTTGCTCTGGTACT
CGAGAAACCGCGCGAAAACC

Downstream 100 bases:

>100_bases
TAGCTCGTCCGACGAGCCGCGACCTGTTGACTCTTGTGGGGCAGCCATTCCGGCTGCCCGGCTTTCAGCCGGCGTCCCGA
TGCGCCGCGGTTGTCCGCCT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MDTAAQGILNRDEMESRRLLAAQDLQTGLTQSQVARKFGVSRTTASRWNRSLSGNGVEALRKRRAPGRPSRLTADQLKIL
TETYQAGPRASGFDTDRWTTARFADAIFALFGVRYDPDHAGRIMHRLGLRERRRSKRMPEVYTFTLPTVELPEVQSGVA

Sequences:

>Translated_159_residues
MDTAAQGILNRDEMESRRLLAAQDLQTGLTQSQVARKFGVSRTTASRWNRSLSGNGVEALRKRRAPGRPSRLTADQLKIL
TETYQAGPRASGFDTDRWTTARFADAIFALFGVRYDPDHAGRIMHRLGLRERRRSKRMPEVYTFTLPTVELPEVQSGVA
>Mature_159_residues
MDTAAQGILNRDEMESRRLLAAQDLQTGLTQSQVARKFGVSRTTASRWNRSLSGNGVEALRKRRAPGRPSRLTADQLKIL
TETYQAGPRASGFDTDRWTTARFADAIFALFGVRYDPDHAGRIMHRLGLRERRRSKRMPEVYTFTLPTVELPEVQSGVA

Specific function: Unknown

COG id: COG3415

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17906; Mature: 17906

Theoretical pI: Translated: 11.61; Mature: 11.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTAAQGILNRDEMESRRLLAAQDLQTGLTQSQVARKFGVSRTTASRWNRSLSGNGVEAL
CCCHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHH
RKRRAPGRPSRLTADQLKILTETYQAGPRASGFDTDRWTTARFADAIFALFGVRYDPDHA
HHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHH
GRIMHRLGLRERRRSKRMPEVYTFTLPTVELPEVQSGVA
HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHCCCC
>Mature Secondary Structure
MDTAAQGILNRDEMESRRLLAAQDLQTGLTQSQVARKFGVSRTTASRWNRSLSGNGVEAL
CCCHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHH
RKRRAPGRPSRLTADQLKILTETYQAGPRASGFDTDRWTTARFADAIFALFGVRYDPDHA
HHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHH
GRIMHRLGLRERRRSKRMPEVYTFTLPTVELPEVQSGVA
HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA